List of clones in pair P017887.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN038A14Sequence614003471 (10)ref|XP_006342038.1|1e-54PREDICTED: HVA22-like protein i-like [Solanum tuberosum]
JMFS134G02Sequence626003471 (10)emb|CDP07408.1|2e-57unnamed protein product [Coffea canephora]
JMSF009F24Sequence379003471 (10)ref|XP_009613529.1|2e-27PREDICTED: putative HVA22-like protein g [Nicotiana tomentosiformis]670003471 (10)ref|XP_009772284.1|1e-09PREDICTED: putative HVA22-like protein g [Nicotiana sylvestris] ref|XP_009772285
JMSF028J22Sequence637003471 (10)gb|AHA43416.1|1e-85HVA22-like protein i-like isoform [Solanum nigrum]654003471 (10)ref|XP_009772284.1|8e-10PREDICTED: putative HVA22-like protein g [Nicotiana sylvestris] ref|XP_009772285
JMSF029H13Sequence673003471 (10)ref|XP_004238350.1|2e-91PREDICTED: putative HVA22-like protein g [Solanum lycopersicum]738003471 (10)ref|XP_006342038.1|3e-41PREDICTED: HVA22-like protein i-like [Solanum tuberosum]
JMSF052E15Sequence704003471 (10)gb|AHA43416.1|9e-89HVA22-like protein i-like isoform [Solanum nigrum]897003471 (10)ref|XP_006342038.1|2e-71PREDICTED: HVA22-like protein i-like [Solanum tuberosum]

Contig 3471 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig003471============================================1463         
 123         ------------------------->JMSF009F24                                                                     
                                                           <---------------------------------------------rJMSF009F24  
 139         ------------------------------------------>JMSF028J22                                                    
                                                            <-------------------------------------------rJMSF028J22  
 232         ----------------------------------------------->JMSF052E15                                               
                                     <-----------------------------------------------------------rJMSF052E15  
 237         --------------------------------------------->JMSF029H13                                                 
                                               <-------------------------------------------------rJMSF029H13

The following clones don't have the opposite end in this pair.

     ------------------------------------------>JMFS134G02-                                                           
                                           ----------------------------------------->JMFN038A14-