| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN038A14 | Sequence | 614 | 003471 (10) | ref|XP_006342038.1| | 1e-54 | PREDICTED: HVA22-like protein i-like [Solanum tuberosum] | |||||
| JMFS134G02 | Sequence | 626 | 003471 (10) | emb|CDP07408.1| | 2e-57 | unnamed protein product [Coffea canephora] | |||||
| JMSF009F24 | Sequence | 379 | 003471 (10) | ref|XP_009613529.1| | 2e-27 | PREDICTED: putative HVA22-like protein g [Nicotiana tomentosiformis] | 670 | 003471 (10) | ref|XP_009772284.1| | 1e-09 | PREDICTED: putative HVA22-like protein g [Nicotiana sylvestris] ref|XP_009772285 |
| JMSF028J22 | Sequence | 637 | 003471 (10) | gb|AHA43416.1| | 1e-85 | HVA22-like protein i-like isoform [Solanum nigrum] | 654 | 003471 (10) | ref|XP_009772284.1| | 8e-10 | PREDICTED: putative HVA22-like protein g [Nicotiana sylvestris] ref|XP_009772285 |
| JMSF029H13 | Sequence | 673 | 003471 (10) | ref|XP_004238350.1| | 2e-91 | PREDICTED: putative HVA22-like protein g [Solanum lycopersicum] | 738 | 003471 (10) | ref|XP_006342038.1| | 3e-41 | PREDICTED: HVA22-like protein i-like [Solanum tuberosum] |
| JMSF052E15 | Sequence | 704 | 003471 (10) | gb|AHA43416.1| | 9e-89 | HVA22-like protein i-like isoform [Solanum nigrum] | 897 | 003471 (10) | ref|XP_006342038.1| | 2e-71 | PREDICTED: HVA22-like protein i-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
rJMSF028J22- ATTCCT
rJMSF009F24- TAAGCAGCAGCAGAGGAATTCCT
____________________________________________________________
consensus TAAGCAGCAGCAGAGGAATTCCT
. : . : . : . : . : . :
rJMSF028J22- ATTTCCTAATTAACGTTTGATGTCATGAGCAAAGATTCATTAACAGGCCTCCATTTGGTC
rJMSF009F24- ATTTCCTAATTAACGTTTGATGTCATGAGCAAAGATTCATTAACAGGCCTCCATTTGGTC
____________________________________________________________
consensus ATTTCCTAATTAACGTTTGATGTCATGAGCAAAGATTCATTAACAGGCCTCCATTTGGTC
. : . : . : . : . : . :
rJMSF028J22- CTACCCATTCATTTTTGTCAGCCCATGCTTAAAAACCACGGACAACTTGAGGTAATGAAT
rJMSF009F24- CTACCCATTCATTTTTGTCAGCCCATGCTTAAAAACCACGGACAACTTGAGGTAATGAAT
rJMSF029H13- AAACCACGGACAACTTGAGGTAATGAAT
rJMSF052E15- GCTTAAAAACCACGGACAACTTGAGGTAATGAAT
____________________________________________________________
consensus CTACCCATTCATTTTTGTCAGCCCATGCTTAAAAACCACGGACAACTTGAGGTAATGAAT
. : . : . : . : . : . :
rJMSF028J22- GAAAGAAAGAAAGAAATGTGAAAATGTACAACATTGTGGACCTATAAAACCATCCTTTTT
rJMSF009F24- GAAAGAAAGAAAGAAATGTGAAAATGTACAACATTGTGGACCTATAAAACCATCCTTTTT
rJMSF029H13- GAAAGAAAGAAAGAAATGTGAAAATGTACAACATTGTGGACCTATAAAACCATCCTTTTT
rJMSF052E15- GAAAGAAAGAAAGAAATGTGAAAATGTACAACATTGTGGACCTATAAAACCATCCTTTTT
____________________________________________________________
consensus GAAAGAAAGAAAGAAATGTGAAAATGTACAACATTGTGGACCTATAAAACCATCCTTTTT
. : . : . : . : . : . :
rJMSF028J22- CACCTACCACCTAAACACATTTCACAAAGTAACATGGTAAGGGACTAAGGGGCCTGACCG
rJMSF009F24- CACCTACCACCTAAACACATTTCACAAAGTAACATGGTAAGGGACTAAGGGGCCTGACCG
rJMSF029H13- CACCTACCACCTAAACACATTTCACAAAGTAACATGGTAAGGGACTAAGGGGCCTGACCG
rJMSF052E15- CACCTACCACCTAAACACATTTCACAAAGTAACATGGTAAGGGACTAAGGGGCCTGACCG
____________________________________________________________
consensus CACCTACCACCTAAACACATTTCACAAAGTAACATGGTAAGGGACTAAGGGGCCTGACCG
. : . : . : . : . : . :
rJMSF028J22- CACGATAGTCACTGGTCTGAAGCAGCACGCTGGATTTTCCTTGACCTTGCTCTAGTAACT
rJMSF009F24- CACGATAGTCACTGGTCTGAAGCAGCACGCTGGATTTTCCTTGACCTTGCTCTAGTAACT
rJMSF029H13- CACGATAGTCACTGGTCTGAAGCAGCACGCTGGATTTTCCTTGACCTTGCTCTAGTAACT
JMFN038A14+ GCTGGATTTTCCTTGACCTTGCTCTAGTAACT
rJMSF052E15- CACGATAGTCACTGGTCTGAAGCAGCACGCTGGATTTTCCTTGACCTTGCTCTAGTAACT
____________________________________________________________
consensus CACGATAGTCACTGGTCTGAAGCAGCACGCTGGATTTTCCTTGACCTTGCTCTAGTAACT
. : . : . : . : . : . :
rJMSF028J22- CGAGCAGCCCCTTCCACCATAACAGTATCTGTGGGGGGTTTGGTGCTTTCGTCCGCCAGA
rJMSF009F24- CGAGCAGCCCCTTCCACCATAACAGTATCTGTGGGGGGTTTGGTGCTTTCGTCCGCCAGA
rJMSF029H13- CGAGCAGCCCCTTCCACCATAACAGTATCTGTGGGGGGTTTGGTGCTTTCGTCCGCCAGA
JMFN038A14+ CGAGCAGCCCCTTCCACCATAACAGTATCTGTGGGGGGTTTGGTGCTTTCGTCCGCCAGA
rJMSF052E15- CGAGCAGCCCCTTCCACCATAACAGTATCTGTGGGGGGTTTGGTGCTTTCGTCCGCCAGA
____________________________________________________________
consensus CGAGCAGCCCCTTCCACCATAACAGTATCTGTGGGGGGTTTGGTGCTTTCGTCCGCCAGA
. : . : . : . : . : . :
rJMSF028J22- GAATGCACGGGGGGTTCAATCTGCATTGCCTGTGCTTCGCTGGAACTTGGAGCTTTGATG
rJMSF009F24- GAATGCACGGGGGGTTCAATCTGCATTGCCTGTGCTTCGCTGGAACTTGGAGCTTTGATG
rJMSF029H13- GAATGCACGGGGGGTTCAATCTGCATTGCCTGTGCTTCGCTGGAACTTGGAGCTTTGATG
JMFN038A14+ GAATGCACGGGGGGTTCAATCTGCATTGCCTGTGCTTCGCTGGAACTTGGAGCTTTGATG
rJMSF052E15- GAATGCACGGGGGGTTCAATCTGCATTGCCTGTGCTTCGCTGGAACTTAGAGCTTTGATG
____________________________________________________________
consensus GAATGCACGGGGGGTTCAATCTGCATTGCCTGTGCTTCGCTGGAACTTGGAGCTTTGATG
. : . : . : . : . : . :
rJMSF028J22- GTTTCAGCAAGGGGTTTTGTCGGTGTGGTTTTTTGAGCATTCAAGGAAGCAGTGGGCACA
rJMSF009F24- GTTTCAGCAAGGGGTTTTGTCGGTGTGGTTTTTTGAGCATTCAAGGAAGCAGTGGGCACA
rJMSF029H13- GTTTCAGCAAGGGGTTTTGTCGGTGTGGTTTTTTGAGCATTCAAGGAAGCAGTGGGCACA
JMFN038A14+ GTTTCAGCAAGGGGTTTTGTCGGTGTGGTTTTTTGAGCATTCAAGGAAGCAGTGGGCACA
rJMSF052E15- GTTTCAGCAAGGGGTTTTGTCGGTGTGGTTTTTTGAGCATTCAAGGAAGCAGTGGGCACA
____________________________________________________________
consensus GTTTCAGCAAGGGGTTTTGTCGGTGTGGTTTTTTGAGCATTCAAGGAAGCAGTGGGCACA
. : . : . : . : . : . :
rJMSF028J22- GCTGTTTTAGGAGGTGCACCATCTTCAAGTTCGCTTGCAGGTTCACCGGGAGCAGCAGGA
rJMSF009F24- GCTGTTTTAGGAGGTGCACCATCTTCAAGTTCGCTTGCAGGTTCACCGGGAGCAGCAGGA
rJMSF029H13- GCTGTTTTAGGAGGTGCACCATCTTCAAGTTCGCTTGCAGGTTCACCGGGAGCAGCAGGA
JMFN038A14+ GCTGTTTTAGGAGGTGCACCATCTTCAAGTTCGCTTGCAGGTTCACCGGGAGCAGCAGGA
rJMSF052E15- GCTGTTTTAGGAGGTGCACCATCTTCAAGTTCGCTTGCAGGTTCACCGGGAGCAGCAGGA
____________________________________________________________
consensus GCTGTTTTAGGAGGTGCACCATCTTCAAGTTCGCTTGCAGGTTCACCGGGAGCAGCAGGA
. : . : . : . : . : . :
rJMSF028J22- GGCCGATCTTCAGTTTGTGGCTCTATTGTTGCAGATTCTGCTCTCTGATTTGCTGGTGCA
rJMSF009F24- GGCCGATCTTCAGTTTGTGGCTCTATTGTTGCAGATTCTGCTCTCTGATTTGCTGGTGCA
rJMSF029H13- GGCCGATCTTCAGTTTGTGGCTCTATTGTTGCAGATTCTGCTCTCTGATTTGCTGGTGCA
JMFN038A14+ GGCCGATCTTCAGTTTGTGGCTCTATTGTTGCAGATTCTGCTCTCTGATTTGCTGGTGCA
rJMSF052E15- GGCCGATCTTCAGTTTGTGGCTCTATTGTTGCAGATTCTGCTCTCTGATTTGCTGGTGCA
____________________________________________________________
consensus GGCCGATCTTCAGTTTGTGGCTCTATTGTTGCAGATTCTGCTCTCTGATTTGCTGGTGCA
. : . : . : . : . : . :
rJMSF028J22- GGAGGTCCGGGGACTCTAGTGCTGCCTTGCCTCCGTGGCTG
rJMSF009F24- GGAGGTCCGGGGACTCTAGTGCTGCCTTGCCTCCGTGGCTGTGCAGG
rJMSF029H13- GGAGGTCCGGGGACTCTAGTGCTGCCTTGCCTCCGTGGCTGTGCAGGGGGAGGTGGAGTT
JMFN038A14+ GGAGGTCCGGGGACTCTAGTGCTGCCTTGCCTCCGTGGCTGTGCAGGGGGAGGTGGAGTT
rJMSF052E15- GGAGGTCCGGGGACTCTAGTGCTGCCTTGCCTCCGTGGCTGTGCAGGGGGAGGTGGAGTT
JMSF052E15+ TAGTGCTGCCTTGCCTCCGTGGCTGTGCAGGGGGAGGTGGAGTT
JMSF029H13+ GGGGAGGTGGAGTT
____________________________________________________________
consensus GGAGGTCCGGGGACTCTAGTGCTGCCTTGCCTCCGTGGCTGTGCAGGGGGAGGTGGAGTT
. : . : . : . : . : . :
rJMSF029H13- GACTGTGAAGCAATATACTGCAAGACATCAAAAATTCTTGTCTGACCATAACTAGCAGCC
JMFN038A14+ GACTGTGAAGCAATATACTGCAAGACATCAAAAATTCTTGTCTGACCATAACTAGCAGCC
rJMSF052E15- GACTGTGAAGCAATATACTGCAAGACATCAAAAATTCTTGTCTGACCATAACTAGCAGCC
JMSF052E15+ GACTGTGAAGCAATATACTGCAAGACATCAAAAATTCTTGTCTGACCATAACTAGCAGCC
JMSF029H13+ GACTGTGAAGCAATATACTGCAAGACATCAAAAATTCTTGTCTGACCATAACTAGCAGCC
JMSF028J22+ GACATCAAAAATTCTTGTCTGACCATAACTAGCAGCC
____________________________________________________________
consensus GACTGTGAAGCAATATACTGCAAGACATCAAAAATTCTTGTCTGACCATAACTAGCAGCC
. : . : . : . : . : . :
rJMSF029H13- TTTTGCCAATACAAAAATACTGCATCTCCAGCCCAAGTCTTCAATTCCAGCAAATTGCGA
JMFN038A14+ TTTTGCCAATACAAAAATACTGCATCTCCAGCCCAAGTCTTCAATTCCAGCAAATTGCGA
rJMSF052E15- TTTTGCCAATACAAAAATACTGCATCTCCAGCCCAAGTCTTCAATTCCAGCAAATTGCGA
JMSF052E15+ TTTTGCCAATACAAAAATACTGCATCTCCAGCCCAAGTCTTCAATTCCAGCAAATTGCGA
JMSF029H13+ TTTTGCCAATACAAAAATACTGCATCTCCAGCCCAAGTCTTCAATTCCAGCAAATTGCGA
JMSF028J22+ TTTTGCCAATACAAAAATACTGCATCTCCAGCCCAAGTCTTCAATTCCAGCAAATTGCGA
____________________________________________________________
consensus TTTTGCCAATACAAAAATACTGCATCTCCAGCCCAAGTCTTCAATTCCAGCAAATTGCGA
. : . : . : . : . : . :
rJMSF029H13- TCAATCTCTGGCTCATGTCTTAGAACCAGTGGCCTAAAGAATGCATCGTA
JMFN038A14+ TCAATCTCTGGCTCATGTCTTAGAACCAGTGGCCTAAAGAATGCATCGTAGACATAAGTT
rJMSF052E15- TCAATCTCTGGCTCATGTCTTAGAACCAGTGGCCTAAAGAATGCATCGTAGACATAAGTT
JMSF052E15+ TCAATCTCTGGCTCATGTCTTAGAACCAGTGGCCTAAAGAATGCATCGTAGACATAAGTT
JMSF029H13+ TCAATCTCTGGCTCATGTCTTAGAACCAGTGGCCTAAAGAATGCATCGTAGACCTAAGTT
JMSF028J22+ TCAATCTCTGGCTCATGTCTTAGAACCAGTGGCCTAAAGAATGCATCGTAGACATAAGTT
JMFS134G02+ TAAAGAATGCATCGTAGACATAAGTT
____________________________________________________________
consensus TCAATCTCTGGCTCATGTCTTAGAACCAGTGGCCTAAAGAATGCATCGTAGACATAAGTT
. : . : . : . : . : . :
JMFN038A14+ GTTCCCTTAGTCTTTGGCAACCACAAGTATATGTAGAATGCC
rJMSF052E15- GTTCCCTTAGTCTTTGGGAACCACAAGTATATGTAGAATGCCAACTTAGCTTCACTATAC
JMSF052E15+ GTTCCCTTAGTCTTTGGGAACCACAAGTATATGTAGAATGCCAACTTAGCTTCACTATAC
JMSF029H13+ GTTCCCTTAGTCTTTGGGAACCACAAGTATATGTAGAATGCCAACTTAGCTTCACTATAC
JMSF028J22+ GTTCCCTTAGTCTTTGGGAACCACAAGTATATGTAGAATGCCAACTTAGCTTCACTATAC
JMFS134G02+ GTTCCCTTAGTCTTTGGGAACCACAAGTATATGTAGAATGCCAACTTAGCTTCACTATAC
____________________________________________________________
consensus GTTCCCTTAGTCTTTGGGAACCACAAGTATATGTAGAATGCCAACTTAGCTTCACTATAC
. : . : . : . : . : . :
rJMSF052E15- ATAGGAACCCATGAGACAAAAGTATCAGCAATTCTCTCACAAACGGTCATTATAGCAACT
JMSF052E15+ ATAGGAACCCATGAGACAAAAGTATCAGCAATTCTCTCACAAACGGTCATTATAGCAACT
JMSF029H13+ ATAGGAACCCATGAGACAAAAGTATCAGCAATTCTCTCACAAACGGTCATTATAGCAACT
JMSF028J22+ ATAGGAACCCATGAGACAAAAGTATCAGCAATTCTCTCACAAACGGTCATTATAGCAACT
JMSF009F24+ ACGGTCATTATAGCAACT
JMFS134G02+ ATAGGAACCCATGAGACAAAAGTATCAGCAATTCTCTCACAAACGGTCATTATAGCAACT
____________________________________________________________
consensus ATAGGAACCCATGAGACAAAAGTATCAGCAATTCTCTCACAAACGGTCATTATAGCAACT
. : . : . : . : . : . :
rJMSF052E15- ATGATC
JMSF052E15+ ATGATCCAATACTGGCACCAAAAGCGAAGTTGCTGGATATCTGGCTTATTCAACTCCACA
JMSF029H13+ ATGATCCAATACTGGCACCAAAAGCGAAGTTGCTGGATATCTGGCTTATTCAACTCCACA
JMSF028J22+ ATGATCCAATACTGGCACCAAAAGCGAAGTTGCTGGATATCTGGCTTATTCAACTCCACA
JMSF009F24+ ATGATCCAATACTGGCACCAAAAGCGAAGTTGCTGGATATCTGGCTTATTCAACTCCACA
JMFS134G02+ ATGATCCAATACTGGCACCAAAAGCGAAGTTGCTGGATATCTGGCTTATTCAACTCCACA
____________________________________________________________
consensus ATGATCCAATACTGGCACCAAAAGCGAAGTTGCTGGATATCTGGCTTATTCAACTCCACA
. : . : . : . : . : . :
JMSF052E15+ GTTTTAAAGCACTCATAAGCTGGATATGCATAACCAAAAACCATCACAAGGCCTCTGGTG
JMSF029H13+ GTTTTAAAGCACTCATAAGCTGGATATGCATAACCAAAAACCATCACAAGGCCTCTGGTG
JMSF028J22+ GTTTTAAAGCACTCATAAGCTGGATATGCATAACCAAAAACCATCACAAGGCCTCTGGTG
JMSF009F24+ GTTTTAAAGCACTCATAAGCTGGATATGCATAACCAAAAACCATCACAAGGCCTCTGGTG
JMFS134G02+ GTTTTAAAGCACTCATAAGCTGGATATGCATAACCAAAAACCATCACAAGGCCTCTGGTG
____________________________________________________________
consensus GTTTTAAAGCACTCATAAGCTGGATATGCATAACCAAAAACCATCACAAGGCCTCTGGTG
. : . : . : . : . : . :
JMSF052E15+ AGAAACGAGCCAATCATGTTGATTTCAATTGCAAAATATCGAAAGTGATCGGTAGTTGAG
JMSF029H13+ AGAAACGAGCCAATCATGTTGATTTCAATTGCAAAATATCGAAAGTGATCGGTAGTTGAG
JMSF028J22+ AGAAACGAGCCAATCATGTTGATTTCAATTGCAAAATATCGAAAGTGATCGGTAGTTGAG
JMSF009F24+ AGAAACGAGCCAATCATGTTGATTTCAATTGCAAAATATCGAAAGTGATCGGTAGTTGAG
JMFS134G02+ AGAAACGAGCCAATCATGTTGATTTCAATTGCAAAATATCGAAAGTGATCGGTAGTTGAG
____________________________________________________________
consensus AGAAACGAGCCAATCATGTTGATTTCAATTGCAAAATATCGAAAGTGATCGGTAGTTGAG
. : . : . : . : . : . :
JMSF052E15+ AGTAGCGGCGAAGCGAGATGCTCGAATCCGGTGCAGAAGATCCCGGTGAGCAGAAAAGCG
JMSF029H13+ AGTAGCGGCGAAGCGAGATGCTCGAATCCGGTGCAGAAGATCCCGGTGAGCAGAAAAGCG
JMSF028J22+ AGTAGCGGCGAAGCGAGATGCTCGAATCCGGTGCAGAAGATCCCGGTGAGCAGAAAAGCG
JMSF009F24+ AGTAGCGGCGAAGCGAGATGCTCGAATCCGGTGCAGAAGATCCCGGTGAGCAGAAAAGCG
JMFS134G02+ AGTAGCGGCGAAGCGAGATGCTCGAATCCGGTGCAGAAGATCCCGGTGAGCAGAAAAGCG
____________________________________________________________
consensus AGTAGCGGCGAAGCGAGATGCTCGAATCCGGTGCAGAAGATCCCGGTGAGCAGAAAAGCG
. : . : . : . : . : . :
JMSF052E15+ GCACCGCCGTACAGCGACGGCGAACCGTTGCGATGTCGGCGGCGATGAGGTTGAGTGTGA
JMSF029H13+ GCACCGCCGTACAGCGACGGCGAACCGTTGCGATGTCGGCGGCGATGAGGTTGAGTGTGA
JMSF028J22+ GCACCGCCGTACAGCGACGGCGAACCGTTGCGATGTCGGCGGCGATGAGGTTGAGTGTGA
JMSF009F24+ GCACCGCCGTACAGCGACGGCGAACCGTTGCGATGTCGGCGGCGATGAGGCTGAGTGTGA
JMFS134G02+ GCACCGCCGTACAGCGACGGCGAACCGTTGCGATGTCGGCGGCGATGAGGTTGAGTGTGA
____________________________________________________________
consensus GCACCGCCGTACAGCGACGGCGAACCGTTGCGATGTCGGCGGCGATGAGGTTGAGTGTGA
. : . : . : . : . : . :
JMSF052E15+ CTAGAGAAAGCGGAAATGACCAAACTGCCAACGGGTGTTTTGAAATCCAGTAATGTC
JMSF029H13+ CTAGAGAAAGCGGAAATGACCAAACTGCCAACGGGTGTTTTGAAATCCAGTAATGTCT
JMSF028J22+ CTAGAGAAAGCGGAAATGACCAAACTGCCAACGGGTGTTTTGAAATCCAGTAATGTCT
JMSF009F24+ CTAGAGAAAGCGGAAATGACCAAACTGCCAACGGGTGTTTTGAAATCCAGTAATGTCT
JMFS134G02+ CTAGAGAAAGCGGAAATGACCAAACTGCCAACGGGTGTTTTGAAATCCAGTAATGTCTAT
____________________________________________________________
consensus CTAGAGAAAGCGGAAATGACCAAACTGCCAACGGGTGTTTTGAAATCCAGTAATGTCTAT
. : . : . : . : . : . :
JMFS134G02+ CGTAGTTATAAATTTTTGGCTTTTTAAACTCCGTCAGTGGATTTGGTGCAAGAGTACCCA
____________________________________________________________
consensus CGTAGTTATAAATTTTTGGCTTTTTAAACTCCGTCAGTGGATTTGGTGCAAGAGTACCCA
. : . : . : . : . : . :
JMFS134G02+ CGGTGATAGCCTGGGCATTCGTTTTCTCCACCGTTCGATAACAACAACGGTTCAGATTGA
____________________________________________________________
consensus CGGTGATAGCCTGGGCATTCGTTTTCTCCACCGTTCGATAACAACAACGGTTCAGATTGA