clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF038H11 | Sequence | 566 | 008890 (8) | gb|EYU18040.1| | 7e-67 | hypothetical protein MIMGU_mgv11b012697mg [Erythranthe guttata] | 702 | 008890 (8) | gb|ABM55742.1| | 2e-78 | putative transcription factor Btf3 [Capsicum annuum] |
JMFF048N06 | Sequence | 442 | 008890 (8) | gb|ABM55742.1| | 2e-57 | putative transcription factor Btf3 [Capsicum annuum] | 272 | 008890 (8) | ref|XP_010037015.1| | 2e-09 | PREDICTED: transcription factor BTF3 homolog 4 [Eucalyptus grandis] |
JMFF048N14 | Sequence | 512 | 008890 (8) | ref|XP_009629608.1| | 9e-67 | PREDICTED: transcription factor BTF3 homolog 4-like [Nicotiana tomentosiformis] | 433 | 008890 (8) | gb|ABE01085.1| | 5e-39 | BTF3 [Nicotiana benthamiana] |
JMFN029L02 | Sequence | 633 | 008890 (8) | gb|ABM55742.1| | 2e-76 | putative transcription factor Btf3 [Capsicum annuum] | |||||
JMFN033F22 | Sequence | 504 | 008890 (8) | ref|XP_009766702.1| | 6e-70 | PREDICTED: transcription factor BTF3 homolog 4-like [Nicotiana sylvestris] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig008890============================================ 738 1 -------------------------------------------------------------------->JMFF048N14 <----------------------------------------------------------rJMFF048N14 215 -------------------------------------------->JMFF048N06 <-----------------------rJMFF048N06 216 ----------------------------------------------------->JMFF038H11 <-----------------------------------------------------------------------rJMFF038H11
The following clones don't have the opposite end in this pair.
----------------------------------------------------------------->JMFN029L02- ----------------------------------------------------------->JMFN033F22-