| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF038H11 | Sequence | 566 | 008890 (8) | gb|EYU18040.1| | 7e-67 | hypothetical protein MIMGU_mgv11b012697mg [Erythranthe guttata] | 702 | 008890 (8) | gb|ABM55742.1| | 2e-78 | putative transcription factor Btf3 [Capsicum annuum] |
| JMFF048N06 | Sequence | 442 | 008890 (8) | gb|ABM55742.1| | 2e-57 | putative transcription factor Btf3 [Capsicum annuum] | 272 | 008890 (8) | ref|XP_010037015.1| | 2e-09 | PREDICTED: transcription factor BTF3 homolog 4 [Eucalyptus grandis] |
| JMFF048N14 | Sequence | 512 | 008890 (8) | ref|XP_009629608.1| | 9e-67 | PREDICTED: transcription factor BTF3 homolog 4-like [Nicotiana tomentosiformis] | 433 | 008890 (8) | gb|ABE01085.1| | 5e-39 | BTF3 [Nicotiana benthamiana] |
| JMFN029L02 | Sequence | 633 | 008890 (8) | gb|ABM55742.1| | 2e-76 | putative transcription factor Btf3 [Capsicum annuum] | |||||
| JMFN033F22 | Sequence | 504 | 008890 (8) | ref|XP_009766702.1| | 6e-70 | PREDICTED: transcription factor BTF3 homolog 4-like [Nicotiana sylvestris] | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF048N14- AGGGTAAAATTAATTGAT
____________________________________________________________
consensus AGGGTAAAATTAATTGAT
. : . : . : . : . : . :
rJMFF048N14- AACAATAACATCCATGTAATAAAGCTTGGAATCTCATAATACACATCATATTCAGCACTC
____________________________________________________________
consensus AACAATAACATCCATGTAATAAAGCTTGGAATCTCATAATACACATCATATTCAGCACTC
. : . : . : . : . : . :
rJMFF048N06- GAACAAAATTTAATTGAAATTTTA
rJMFF048N14- ACCCATAGATAGCAAAGATCACAAATCACATAAAAGGAACAAAATTTAATTGAAATTTTA
rJMFF038H11- GAACAAAATTTAATTAAAATTTTA
____________________________________________________________
consensus ACCCATAGATAGCAAAGATCACAAATCACATAAAAGGAACAAAATTTAATTGAAATTTTA
. : . : . : . : . : . :
rJMFF048N06- TTTTTGTCCCTCATCGGCAGCAGCTTCAAAGGTTTCACCATCCACAAGTTGGGGCACCTC
rJMFF048N14- TTTTTGTCCCTCATCGGCAGCAGCTTCAAAGGTTTCACCATCCACAAGTTGGGGCACCTC
JMFN029L02+ CATCGGCAGCAGCTTCAAAGGTTTCACCATCCACAAGTTGGGGCACCTC
rJMFF038H11- TTTTTGTCCCTCATCGGCAGCAGCTTCAAAGGTTTCACCATCCACGAGTTGGGGCACC--
____________________________________________________________
consensus TTTTTGTCCCTCATCGGCAGCAGCTTCAAAGGTTTCACCATCCACAAGTTGGGGCACCTC
. : . : . : . : . : . :
rJMFF048N06- ATCATCATCATCTTCTTGAAGGGCATTTGCACCAGTAAATGCATCTGCACTATCAGCAGA
rJMFF048N14- ATCATCATCATCTTCTTGAAGGGCATTTGCACCAGTAGATGCATCTGCACTATCAGCAGT
JMFN033F22+ ATCATCATCTTCTTGCGGGGCATTTGCACCAGCAATTAAATCTGCACTATCAGCTGT
JMFF038H11+ ATCTGCACTATCAGCTGT
JMFN029L02+ ATCATCATCATCTTCTTGAAGGGCATTGCACCCAGTAGATGCATCTGCACTATCAGCAGT
rJMFF038H11- -TCATCATCATCTTCTTGCGGGGCATTTGCACCAGCAATTAAATCTGCACTATCAGCTGT
JMFF048N14+ GCACCAGTAGATGCATCTGCACTATCAGCAGT
____________________________________________________________
consensus ATCATCATCATCTTCTTGAAGGGCATTTGCACCAGTAGATGCATCTGCACTATCAGCAGT
. : . : . : . : . : . :
rJMFF048N06- ACCAGTTGTTTGCTTTTGGAACTGCTCTGCCA
rJMFF048N14- ACCAGTTGTTTGCTTTTGGAACTGCTCTGCCAACTTCTTCAAGTTCTCAAGATTGTCAGG
JMFN033F22+ ACCAGTCGTTTGCTTTTGGAACTGCTCTGCCAACTTCTTCAAGTTCTCGAGATTGTCAGG
JMFF038H11+ ACCAGTCGTTTGCTTTTGGAACTGCTCTGCCAACTTCTTCAAGTTCTCGAGATTGTCAGG
JMFF048N06+ CAAGATTGTCAGG
JMFN029L02+ ACCAGTTGTTTGCTTTTGGAACTGCTCTGCCAACTTCTTCAAGTTCTCAAGATTGTCAGG
rJMFF038H11- ACCAGTCGTTTGCTTTTGGAACTGCTCTGCCAACTTCTTCAAGTTCTCGAGATTGTCAGG
JMFF048N14+ ACCAGTTGTTTGCTTTTGGAACTGCTCTGCCAACTTCTTCAAGTTCTCAAGATTGTCAGG
____________________________________________________________
consensus ACCAGTTGTTTGCTTTTGGAACTGCTCTGCCAACTTCTTCAAGTTCTCAAGATTGTCAGG
. : . : . : . : . : . :
rJMFF048N14- ACCCAATTGGTGAATAATTTGAGGAAGAATATCTTGCAATTTCTTAATCTGAGGAGAACC
JMFN033F22+ ACCCAATTGGTGAATAATTTGTGGAAGAATATCTTGCAATTTCTTAATGTGAGGAGCACC
JMFF038H11+ ACCCAATTGGTGAATAATTTGTGGAAGAATATCTTGCAATTTCTTAATCTGAGGAGCACC
JMFF048N06+ ACCCAATTGGTGAATAATTTGAGGAAGAATATCTTGCAATTTCTTAATCTGAGGAGAACC
JMFN029L02+ ACCCAATTGGTGAATAATTTGAGGAAGAATATCTTGCAATTTCTTAATCTGAGGAGAACC
rJMFF038H11- ACCCAATTGGTGAATAATTTGTGGAAGAATATCTTGCAATTTCTTAATCTGAGGAGCACC
JMFF048N14+ ACCCAATTGGTGAATAATTTGAGGAAGAATATCTTGCAATTTCTTAATCTGAGGAGAACC
____________________________________________________________
consensus ACCCAATTGGTGAATAATTTGAGGAAGAATATCTTGCAATTTCTTAATCTGAGGAGAACC
. : . : . : . : . : . :
rJMFF048N14- ACTCACAACCCAAGTATTTGCAGCAATTGAAGCTTGAACTTTTGGATTAAGGAAC
JMFN033F22+ ACTCACAACCCAAGTATTTGCGGCAATTGAAGCTTGAACTTTTGGATTAAGGAACTGGAC
JMFF038H11+ ACTCACAACCCAAGTATTTGCGGCAATTGAAGCTTGAACTTTTGGATTAAGGAACTGGAC
JMFF048N06+ ACTCACAACCCAAGTATTTGCAGCAATTGAAGCTTGAACTTTTGGATTAAGGAACTGGAC
JMFN029L02+ ACTCACAACCCAAGTATTTGCAGCAATTGAAGCTTGAACTTTTGGATTAAGGAACTGGAC
rJMFF038H11- ACTCACAACCCAAGTATTTGCGGCAATTGAAGCTTGAACTTTTGGATTAAGGAACTGGAC
JMFF048N14+ ACTCACAACCCAAGTATTTGCAGCAATTGAAGCTTGAACTTTTGGATTAAGGAACTGGAC
____________________________________________________________
consensus ACTCACAACCCAAGTATTTGCAGCAATTGAAGCTTGAACTTTTGGATTAAGGAACTGGAC
. : . : . : . : . : . :
JMFN033F22+ AACTACATCCTCCTTAAAAATGTTCACCTCTTCTATGGCAGGAATGGCATTCACCCCTAT
JMFF038H11+ AACTACATCCTCCTTAAAAATGTTCACCTCTTCTATGGCAGGAATGGCATTCACCCCTAT
JMFF048N06+ AACTACATCCTCCTTAAAAATGTTCACCTCTTCTATGGCAGGAATGGCATTCACCCCTAT
JMFN029L02+ AACTACATCCTCCTTAAAAATGTTCACCTCTTCTATGGCAGGAATGGCATTCACCCCTAT
rJMFF038H11- AACTACATCCTCCTTAAAAATGTTCACCTCTTCTATGGCAGGAATGGCATTCACCCCTAT
JMFF048N14+ AACTACATCCTCCTTAAAAATGTTCACCTCTTCTATGGCAGGAATGGCATTCACCCCTAT
____________________________________________________________
consensus AACTACATCCTCCTTAAAAATGTTCACCTCTTCTATGGCAGGAATGGCATTCACCCCTAT
. : . : . : . : . : . :
JMFN033F22+ TCTCTTCAGAGTACTCTGAAGTCTTTTGTCATCTGTAGTAGTAGTTTTGTGAACCGCCTT
JMFF038H11+ TCTCTTCAGAGTACTCTGAAGTCTTTTGTCATCTGTAGTAGTAGTTTTGTGAACCGCCTT
JMFF048N06+ TCTCTTCAGAGTACTCTGAAGTCTTTTGTCATCCGTGGTAGTAGTTTTGTGAACCGCCTT
JMFN029L02+ TCTCTTCAGAGTACTCTGAAGTCTTTTGTCATCCGTGGTAGTAGTTTTGTGAACCGCCTT
rJMFF038H11- TCTCTTCAGAGTACTCTGAAGTCTTTTGTCATCTGTAGTAGTAGTTTTGTGAACCGCCTT
JMFF048N14+ TCTCTTCAGAGTACTCTGAAGTCTTTTGTCATCCGTGGTAGTAGTTTTGTGAACCGCCTT
____________________________________________________________
consensus TCTCTTCAGAGTACTCTGAAGTCTTTTGTCATCTGTAGTAGTAGTTTTGTGAACCGCCTT
. : . : . : . : . : . :
JMFN033F22+ CTTCTTTCTCCTCATAGTTCCCTTGCCACCGGTCCGGACAGAACCAGCCATCTTTTGAAG
JMFF038H11+ CTTCTTTCTCCTCATAGTTCCCTTGCCACCGGTCCGGACAGAACCAGCCATCTTTTGAAG
JMFF048N06+ CTTCTTTCTCCTCATAGTTCCCTTGCCACCAGTCCGGACAGAACCGGCCATCTTTTGAAG
JMFN029L02+ CTTCTTTCTCCTCATAGTTCCCTTGCCACCAGTCCGGACAGAACCGGCCATCTTTTGAAG
rJMFF038H11- CTTCTTTCTCCTCATAGTTCCCTTGCCACCGGTCCGGACAGAACCAGCCATCTTTTGAAG
JMFF048N14+ CTTCTTTCTCCTCATAGTTCCCTTGCCACCAGTCCGGACAGAACCGGCCATCTTTTGAAG
____________________________________________________________
consensus CTTCTTTCTCCTCATAGTTCCCTTGCCACCGGTCCGGACAGAACCAGCCATCTTTTGAAG
. : . : . : . : . : . :
JMFN033F22+ CTTTTCTACATTCATCTCTGACGATGCTT
JMFF038H11+ CTTTTCTACATTCATCTC
JMFF048N06+ CTTTTCTACATTCATCTCG
JMFN029L02+ CTTTTCTACATTCATCTCG
rJMFF038H11- CTTTTCTACATTCATCTCTGACGATGCTT
JMFF048N14+ CTTTTCTACATTCATCTCGCACGATGCTTTAGCGGCTGTTGACCGAGGGCGGGAAATAGT
____________________________________________________________
consensus CTTTTCTACATTCATCTCTGACGATGCTTTAGCGGCTGTTGACCGAGGGCGGGAAATAGT
. : . : . : . : . : . :
JMFF048N14+ GGCGGACGGTGGCGAGGGAGAGAGAGCGAGAGCTAGAGCTGTGATAGTTGGGATAAAAGT
____________________________________________________________
consensus GGCGGACGGTGGCGAGGGAGAGAGAGCGAGAGCTAGAGCTGTGATAGTTGGGATAAAAGT