clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF009G01 | Sequence | 471 | 004545 (12) | emb|CDP02313.1| | 1e-23 | unnamed protein product [Coffea canephora] | 753 | 004545 (12) | emb|CDP11628.1| | 2e-68 | unnamed protein product [Coffea canephora] |
JMFF019F07 | Sequence | 509 | 004545 (12) | emb|CDP02313.1| | 3e-16 | unnamed protein product [Coffea canephora] | 760 | 004545 (12) | emb|CDP02313.1| | 1e-83 | unnamed protein product [Coffea canephora] |
JMFF019H19 | Sequence | 588 | 004545 (12) | emb|CDP11627.1| | 2e-76 | unnamed protein product [Coffea canephora] | 750 | 004545 (12) | emb|CDP02313.1| | 1e-85 | unnamed protein product [Coffea canephora] |
JMFF021L19 | Sequence | 464 | 004545 (12) | 731 | 004545 (12) | emb|CDP02313.1| | 9e-87 | unnamed protein product [Coffea canephora] | |||
JMFF043H12 | Sequence | 645 | 004545 (12) | emb|CDP02313.1| | 1e-101 | unnamed protein product [Coffea canephora] | 602 | 004545 (12) | emb|CDP11628.1| | 2e-49 | unnamed protein product [Coffea canephora] |
JMFN034G14 | Sequence | 586 | 004545 (12) | emb|CDP11627.1| | 3e-52 | unnamed protein product [Coffea canephora] | |||||
JMFN044H15 | Sequence | 644 | 004545 (12) | gb|KDP27240.1| | 6e-67 | hypothetical protein JCGZ_19939 [Jatropha curcas] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig004545============================================1627 72 ---------------------------->JMFF021L19 <--------------------------------------------rJMFF021L19 272 ------------------------->JMFF009G01 <---------------------------------------------rJMFF009G01 282 ---------------------->JMFF019F07 <----------------------------------------------rJMFF019F07 346 ----------------------------------->JMFF019H19 <---------------------------------------------rJMFF019H19 381 --------------------------------------->JMFF043H12 <------------------------------------rJMFF043H12
The following clones don't have the opposite end in this pair.
------------------------------------>JMFN044H15- -------------------------------->JMFN034G14-