Contig 004545:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009G01Sequence471004545 (12)emb|CDP02313.1|1e-23unnamed protein product [Coffea canephora]753004545 (12)emb|CDP11628.1|2e-68unnamed protein product [Coffea canephora]
JMFF019F07Sequence509004545 (12)emb|CDP02313.1|3e-16unnamed protein product [Coffea canephora]760004545 (12)emb|CDP02313.1|1e-83unnamed protein product [Coffea canephora]
JMFF019H19Sequence588004545 (12)emb|CDP11627.1|2e-76unnamed protein product [Coffea canephora]750004545 (12)emb|CDP02313.1|1e-85unnamed protein product [Coffea canephora]
JMFF021L19Sequence464004545 (12)731004545 (12)emb|CDP02313.1|9e-87unnamed protein product [Coffea canephora]
JMFF043H12Sequence645004545 (12)emb|CDP02313.1|1e-101unnamed protein product [Coffea canephora]602004545 (12)emb|CDP11628.1|2e-49unnamed protein product [Coffea canephora]
JMFN034G14Sequence586004545 (12)emb|CDP11627.1|3e-52unnamed protein product [Coffea canephora]
JMFN044H15Sequence644004545 (12)gb|KDP27240.1|6e-67hypothetical protein JCGZ_19939 [Jatropha curcas]

Alignment

This contig is upended


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rJMFF043H12-                                                               AGCCAAT
                      ____________________________________________________________
consensus                                                                  AGCCAAT
 
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rJMFF043H12-          AGTTGGTGTTAAATAAAGTCAGCTATCAAATACATGAATGCTCCACCAGAACAGCAATAT
rJMFF009G01-                     AATAAAGTCAGCTATCAAATACATGAATGCTCCACCAGAACAGCAATAT
rJMFF019F07-                               GCTATCAAATACATGAATGCTCCACCAGAACAGCAATAT
rJMFF019H19-                                            TGAATGCTCCACCAGAACAGCAATAT
                      ____________________________________________________________
consensus             AGTTGGTGTTAAATAAAGTCAGCTATCAAATACATGAATGCTCCACCAGAACAGCAATAT
 
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rJMFF043H12-          CTAATCACTTATTGTTTTTGCATACATGACTGCAGAATATCCACCACACACTCCCTAGAA
rJMFF009G01-          CTAATCACTTATTGTTTTTGCATACATGACTGCAGAATATCCACCACACACTCCCTAGAA
rJMFF019F07-          CTAATCACTTATTGTTTTTGCATACATGACTGCAGAATATCCACCACACACTCCCTAGAA
rJMFF019H19-          CTAATCACTTATTGTTTTTGCATACATGACTGCAGAATATCCACCACACACTCCCTAGAA
rJMFF021L19-               CACTTATTGTTTTTGCATACATGACTGCAGAATATCCACCACACACTCCCTAGAA
                      ____________________________________________________________
consensus             CTAATCACTTATTGTTTTTGCATACATGACTGCAGAATATCCACCACACACTCCCTAGAA
 
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rJMFF043H12-          ACAGATGGTATCAGAGGAGGAACAGACACACTTTACCTAGAGCAAAGAGAGTTGTAACTT
rJMFF009G01-          ACAGATGGTATCAGAGGAGGAACAGACACACTTTACCTAGAGCAAAGAGAGTTGTAACTT
rJMFF019F07-          ACAGATGGTATCAGAGGAGGAACAGACACACTTTACCTAGAGCAAAGAGAGTTGTAACTT
rJMFF019H19-          ACAGATGGTATCAGAGGAGGAACAGACACACTTTACCTAGAGCAAAGAGAGTTGTAACTT
rJMFF021L19-          ACAGATGGTATCAGAGGAGGAACAGACACACTTTACCTAGAGCAAAGAGAGTTGTAACTT
                      ____________________________________________________________
consensus             ACAGATGGTATCAGAGGAGGAACAGACACACTTTACCTAGAGCAAAGAGAGTTGTAACTT
 
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rJMFF043H12-          GTAAGAGTGGACTGCGCTATCTATAAATCTTCTTTAATTTTACAGTATGATTCCACACAA
rJMFF009G01-          GTAAGAGTGGACTGCGCTATCTATAAATCTTCTTTAATTTTACAGTATGATTCCACACAA
rJMFF019F07-          GTAAGAGTGGACTGCGCTATCTATAAATCTTCTTTAATTTTACAGTATGATTCCACACAA
rJMFF019H19-          GTAAGAGTGGACTGCGCTATCTATAAATCTTCTTTAATTTTACAGTATGATTCCACACAA
rJMFF021L19-          GTAAGAGTGGACTGCGCTATCTATAAATCTTCTTTAATTTTACAGTATGATTCCACACAA
                      ____________________________________________________________
consensus             GTAAGAGTGGACTGCGCTATCTATAAATCTTCTTTAATTTTACAGTATGATTCCACACAA
 
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rJMFF043H12-          GTATCTTCGTCTCCTCGAGCAAAATCAGCAATCAGCTTTGCAACCGAGTGTGGTTCTTCA
rJMFF009G01-          GTATCTTCGTCTCCTCGAGCAAAATCAGCAATCAGCTTTGCAACCGAGTGTGGTTCTTCA
rJMFF019F07-          GTATCTTCGTCTCCTCGAGCAAAATCAGCAATCAGCTTTGCAACCGAGTGTGGTTCTTCA
rJMFF019H19-          GTATCTTCGTCTCCTCGAGCAAAATCAGCAATCAGCTTTGCAACCGAGTGTGGTTCTTCA
rJMFF021L19-          GTATCTTCGTCTCCTCGAGGAAAATCAGCAATCAGCTTTGCAACCGAGTGTGGTTCTTCA
                      ____________________________________________________________
consensus             GTATCTTCGTCTCCTCGAGCAAAATCAGCAATCAGCTTTGCAACCGAGTGTGGTTCTTCA
 
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rJMFF043H12-          ACGTGGGGAAGATGCCCAGAATTTGGAATCTGATGCACTATGGCATTTGGTAGTTCTCTG
rJMFF009G01-          ACGTGGGGAAGATGCCCAGAATTTGGAATCTGATGCACTATGGCATTTGGTAGTTCTCTG
rJMFF019F07-          ACGTGGGGAAGATGCCCAGAATTTGGAATCTGATGCACTATGGCATTTGGTAGTTCTCTG
rJMFF019H19-          ACGTGGGGAAGATGCCCAGAATTTGGAATCTGATGCACTATGGCATTTGGTAGTTCTCTG
rJMFF021L19-          ACGTGGGGAAGATGCCCAGAATTTGGAATCTGATGCACTATGGCATTTGGTAGTTCTCTG
                      ____________________________________________________________
consensus             ACGTGGGGAAGATGCCCAGAATTTGGAATCTGATGCACTATGGCATTTGGTAGTTCTCTG
 
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rJMFF043H12-          CATAATCTCATTGCAAGCTCATTGCTGACTAACTTATCCCGCATGCCCGTTATGACTAGT
rJMFF009G01-          CATAATCTCATTGCAAGCTCATTGCTGACTAACTTATCCCGCATGCCCGTTATGACTAGT
rJMFF019F07-          CATGATCTCATTGCAAGCTCATTGCTGACTAACTTATCCCGCATGCCCGTTATGACTAGT
rJMFF019H19-          CATAATCTCATTGCAAGCTCATTGCTGACTAACTTATCCCGCATGCCCGTTATGACTAGT
rJMFF021L19-          CATAATCTCATTGCAAGCTCATTGCTGACTAACTTATCCCGCATGCCCGTTATGACTAGT
                      ____________________________________________________________
consensus             CATAATCTCATTGCAAGCTCATTGCTGACTAACTTATCCCGCATGCCCGTTATGACTAGT
 
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rJMFF043H12-          GTTCTTTGATTCACCTTTTTAATTTGATGAACAACATTATAACCCCCACTGAGCATGAAA
rJMFF009G01-          GTTCTTTGATTCACCTTTTTAATTTGATGAACAACACTATAACCCCCACTGAGCATGAAA
rJMFF019F07-          GTTCTTTGATTCACCTTTTTAATTTGATGAACAACATTATAACCCCCACTGAGCATGAAA
rJMFF019H19-          GTTCTTTGATTCACCTTTTTAATTTGATGAACAACATTATAACCCCCACTGAGCATGAAA
rJMFF021L19-          GTTCTTTGATTCACCTTTTTAATTTGATGAACAACATTATAACCCCCACTGAGCATGAAA
                      ____________________________________________________________
consensus             GTTCTTTGATTCACCTTTTTAATTTGATGAACAACATTATAACCCCCACTGAGCATGAAA
 
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rJMFF043H12-          TTGACCATAGCATCTTCCCACCAAGGTAAGAGACAGTGCAGTCGCCCCACATTGGTCCAG
rJMFF009G01-          TTGACCATAGCATCTTCCCACCAAGGTAAGAGACAGTGCAGTCGCCCCACATTGGTCCAG
rJMFF019F07-          TTGACCATAGCATCTTCCCACCAAGGTAAGAGACAGTGCAGTCGCCCCACATTGGTCCAG
rJMFF019H19-          TTGACCATAGCATCTTCCCACCAAGGTAAGAGACAGTGCAGTCGCCCCACATTGGTCCAG
rJMFF021L19-          TTGACCATAGCATCTTCCCACCAAGGTAAGAGACAGTGCAGTCGCCCCACATTGGTCCAG
                      ____________________________________________________________
consensus             TTGACCATAGCATCTTCCCACCAAGGTAAGAGACAGTGCAGTCGCCCCACATTGGTCCAG
 
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rJMFF043H12-          TCCAAGGTAGTAGATAGAGATAAGCCATCAAAACACTGTAACTCAGCATAGATCC     
rJMFF009G01-          TCCAAGGTAGTAGATAGAGATAAGCCATCAAAACACTGTAACTTAGCATAGATCCGCAAC
rJMFF019F07-          TCCAAGGTAGTAGATAGAGATAAGCCATCAAAACACTGTAACTTAGCATAGATCCGCAAC
rJMFF019H19-          TCCAAGGTAGTAGATAGAGATAAGCCATCAAAACACTGTAACTTAGCATAGATCCGCAAC
rJMFF021L19-          TCCAAGGTAGTAGATAGAGATAAGCCATCAAAACACTGTAACTTAGCATAGATCCGCAAC
JMFF043H12+                                                                 CGCAAC
                      ____________________________________________________________
consensus             TCCAAGGTAGTAGATAGAGATAAGCCATCAAAACACTGTAACTTAGCATAGATCCGCAAC
 
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rJMFF009G01-          GGGATGCTCTTCAACAAGGAGACCCCGCCATATGCCACCATTTTAGGCAGCTTTGTCATA
rJMFF019F07-          GGGATGCTCTTCAACAAGGAGACCCCGCCATATGCCACCATTTTAGGCAGCTTTGTCATA
rJMFF019H19-          GGGATGCTCTTCAACAAGGAGACCCCGCCATATGCCACCATTTTAGGCAGCTTTGTCATA
rJMFF021L19-          GGGATGCTCTTCAACAAGGAGACCCCGCCATATGCCACCATTTTAGGCAGCTTTGTCATA
JMFF043H12+           GGGATGCTCTTCAACAAGGAGACCCCGCCATATGCCACCATNNTAGGCAGCTTNGTCATA
                      ____________________________________________________________
consensus             GGGATGCTCTTCAACAAGGAGACCCCGCCATATGCCACCATTTTAGGCAGCTTTGTCATA
 
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rJMFF009G01-          AATCCAGTTCCTTCTCCATAAACGCTTGCATTTATCAGAAACCAGTTTATGAACAGCTTC
rJMFF019F07-          AATCCAGTTCCTTCTCCATAAACGCTTGCATTTATCAG-AACCAGTTTATGAACAGCTTC
rJMFF019H19-          AATCCAGTTCCTTCTCCATAAACGCTTGCATTTATCAG-AACCAGTTTATGAACAGCTTC
rJMFF021L19-          AATCCAGTTCCTTCTCCATAAACGCTTGCATTTATCAG-AACCAGTTTATGAACAGCTTC
JMFF043H12+           AATCCAGTTCCTTCTCCATAAACGCTTGCATTTATCAG-AACCAGTTTATGAACAGCTTC
                      ____________________________________________________________
consensus             AATCCAGTTCCTTCTCCATAAACGCTTGCATTTATCAG-AACCAGTTTATGAACAGCTTC
 
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rJMFF009G01-          NGGAAAATTGACTGCAAAATCAATCGCGACTGCTG                         
rJMFF019F07-          GGGAAAATTGACTGCAAAATCAATCGCGACTGCTGCACCAAGGCTTGGACCGACCAATAT
rJMFF019H19-          GGGAAAATTGACTGCAAAATCAATCGCGACTGCTGCACCAAGGCTTGGACCGACCAATAT
rJMFF021L19-          GGGAAAATTGACTGCAAAATCAATCGCGACTGCTGCACCAAGGCTTGGACCGACCAATAT
JMFF043H12+           GGGAAAATTGACTGCAAAATCAATCGCGACTGCTGCACCAAGGCTTGGACCGACCAATAT
JMFF019H19+                      CTGCAAAATCAATCGCGACTGCTGCACCAAGGCTTGGACCGACCAATAT
JMFN044H15+                                                         GGACCGACCAATAT
                      ____________________________________________________________
consensus             GGGAAAATTGACTGCAAAATCAATCGCGACTGCTGCACCAAGGCTTGGACCGACCAATAT
 
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rJMFF019F07-          CA                                                          
rJMFF019H19-          CATA                                                        
rJMFF021L19-          CATANGCCTTTTAATGT                                           
JMFF043H12+           CATAGGCCTTTTAATGTAAGACTTCCATAGCTGGTAAAGATGGTATCTTTTTGATGCAGC
JMFF019H19+           CATAGGCCTTTTAATGTAAGACTTCCATAGCTGGTAAAGATGGTATCTTTTTGATGCAGC
JMFN044H15+           CATAGGCCTTNTAATGTAAGACTTCCATAGCTGGTAAAGATGGTATCTTTTTGATGCAGC
JMFN034G14+                                                          TTTTTGATGCAGC
                      ____________________________________________________________
consensus             CATAGGCCTTTTAATGTAAGACTTCCATAGCTGGTAAAGATGGTATCTTTTTGATGCAGC
 
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JMFF043H12+           ATCACAGGTTGGACGTCTTTCTAAATCGGAGAAACCCCATCCAAGAATGTCGATCGCCCA
JMFF019H19+           ATCACAGGTTGGACGTCTTTCTAAATCGGAGAAACCCCATCCAAGAATGTCGATCGCCCA
JMFN044H15+           ATCACAGGTTGGACGTCTTTCTAAATCGGAGAAACCCCATCCAAGAATGTCGATCGCCCA
JMFN034G14+           ATCACAGGTTGGACGTCTTTCTAAATCGGAGAAACCCCATCCAAGAATGTCGATCGCCCA
                      ____________________________________________________________
consensus             ATCACAGGTTGGACGTCTTTCTAAATCGGAGAAACCCCATCCAAGAATGTCGATCGCCCA
 
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JMFF043H12+           AGCCTCGACACCAGTATCCTCGAGCAAGGGATACGTGCGCCTCCACTCCAAGCATGAGCT
JMFF019H19+           AGCCTCGACACCAGTATCCTCGAGCAAGGGATACGTGCGCCTCCACTCCAAGCATGAGCT
JMFN044H15+           AGCCTCGACACCAGTATCCTCGAGCAAGGGATACGTGCGCCTCCACTCCAAGCATGAGCT
JMFN034G14+           AGCCTCGACACCAGTATCCTCGAGCAAGGGATACGTGCGCCTCCACTCCAAGCATGAGCT
JMFF009G01+                                                           CAAGCATGAGNT
                      ____________________________________________________________
consensus             AGCCTCGACACCAGTATCCTCGAGCAAGGGATACGTGCGCCTCCACTCCAAGCATGAGCT
 
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JMFF043H12+           GTCAAAACAGTGAAGAAGGACAACTGGTTCCTTGTCACCTTGTATCACAGGCTTAATACA
JMFF019H19+           GTCAAAACAGTGAAGAAGGACAACTGGTTCCTTGTCACCTTGTATCACAGGCTTAATACA
JMFN044H15+           GTCAAAACAGTGAAGAAGGACAACTGGTTCCTTGTCACCTTGTATCACAGGCTTAATACA
JMFN034G14+           GTCAAAACAGTGAAGAAGGACAACTGGTTCCTTGTCACCTTGTATCACAGGCTTAATACA
JMFF009G01+           GTCAAANCAGTGAAGAAGGACAACTGGTTCCTTGTCNCCTTGTATCACAGGCTTAATACA
JMFF019F07+                                          TTGTCACCTTGTATCACAGGCTTAATACA
                      ____________________________________________________________
consensus             GTCAAAACAGTGAAGAAGGACAACTGGTTCCTTGTCACCTTGTATCACAGGCTTAATACA
 
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JMFF043H12+           ACTGCTCATTATACTACTCTCAGAGAACACAACCTGAACAGGAAGCCTCTGGATTCTCCG
JMFF019H19+           ACTGCTCATTATACTACTCTCAGAGAACCCAACCTGAACAGGAAGCCTCTGGATTCTCCG
JMFN044H15+           ACTGCTCATTATACTACTCTCAGAGAACCCAACCTGAACAGGAAGCCTCTGGATTCTCCG
JMFN034G14+           ACTGCTCATTATACTACTCTCAGAGAACCCAACCTGAACAGGAAGCCTCTGGATTCTCCG
JMFF009G01+           NCTGCTCATTATACTACTCTCAGAGAACCCAACCTGAACAGGAAGCCTCTGGATTCTCCG
JMFF019F07+           ACTGCTCATTATACTACTCTCAGAGAACCCAACCTGAACAGGAAGCCTCTGGATTCTCCG
                      ____________________________________________________________
consensus             ACTGCTCATTATACTACTCTCAGAGAACCCAACCTGAACAGGAAGCCTCTGGATTCTCCG
 
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JMFF043H12+           GGCCAAGCTCCGAGCAAAAGGGTCTTTGATTTCGTGAACCTCCTTGGGGAGAAACAGCGG
JMFF019H19+           GGCCAAGCTCCGAGCAAAAGGGTCTTTGATTTCGTGAACCTCCTTGGGGAGAAACAGCGG
JMFN044H15+           GGCCAAGCTCCGAGCAAAAGGGTCTTTGATTTCGTGAACCTCCTTGGGGAGAAACAGCGG
JMFN034G14+           GGCCAAGCTCCGAGCAAAAGGGTCTTTGATTTCGTGAACCTCCTTGGGGAGAAACAGCGG
JMFF009G01+           GGCCAAGCTCCGAGCAAAAGGGTCTTTGATTTCGTGAACCTCCTTGGGGAGAAACAGCGG
JMFF019F07+           GGCCAAGCTCCGAGCAAAAGGGTCTTTGATTTCGTGAACCTCCTTGGGGAGAAACAGCGG
                      ____________________________________________________________
consensus             GGCCAAGCTCCGAGCAAAAGGGTCTTTGATTTCGTGAACCTCCTTGGGGAGAAACAGCGG
 
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JMFF043H12+           AAAACCACCACCGCCGGCGACACCAACGCCGTCCACATTCCCTCCGGGCAATCTCGAGCC
JMFF019H19+           AAAACCACCACCGCCGGCGACACCAACGCCGTCCACATTCCCTCCGGGCAATCTCGAGCC
JMFN044H15+           AAAACCACCACCGCCGGCGACACCAACGCCGTCCACATTCCCTCCGGGCAATCTCGAGCC
JMFN034G14+           AAAACCACCACCGCCGGCGACACCAACGCCGTCCACATTCCCTCCGGGCAATCTCGAGCC
JMFF009G01+           AAAACCACCACCGCCGGCGACACCAACGCCGTCCACATTCCCTCCGGGCAATCTCGAGCC
JMFF019F07+           AAAACCACCACCGCCGGCGACACCAACGCCGTCCACATTCCCTCCGGGCAATCTCGAGCC
JMFF021L19+                           GCGACACCAACGCCGTCCACATTCCCTCCGGGCAATCTCGAGCC
                      ____________________________________________________________
consensus             AAAACCACCACCGCCGGCGACACCAACGCCGTCCACATTCCCTCCGGGCAATCTCGAGCC
 
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JMFF043H12+           TGGAATCTCCAGATCCATCACGCTTCGGGTGCCCCATTTC                    
JMFF019H19+           TGGAATCTCCAGATCCATCACGCTTCGGGTGCCCCATTTCCCTCCACCCGGAGCAGAACC
JMFN044H15+           TGGAATCTCCAGATCCATCACGCTTCGGGTGCCCCATTTCCCTCCACCCGGAGCAGAACC
JMFN034G14+           TGGAATCTCCAGATCCATCACGCTTCGGGTGCCCCATTTCCCTCCACCCGGAGCAGAACC
JMFF009G01+           TGGAATCTCCAGATCCATCACGCTTCGGGTGCCCCATTTCCCTCCACCCGGAGCAGAACC
JMFF019F07+           TGGAATCTCCAGATCCATCACGCTTCGGGTGCCCCATTTCCCTCCACCCGGAGCAGAACC
JMFF021L19+           TGGAATCTCCAGATCCATCACGCTTCGGGTGCCCCATTTCCCTCCACCCGGAGCAGAACC
                      ____________________________________________________________
consensus             TGGAATCTCCAGATCCATCACGCTTCGGGTGCCCCATTTCCCTCCACCCGGAGCAGAACC
 
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JMFF019H19+           CAACATCAAAGATATCATCTTTTCGGCCGACCCTCACCCAACACACAAGTACAGT     
JMFN044H15+           CAACATCAAAGATATCATCTTTTCGGCCGACCCTCACCCAACACACAAGTACAGTTCCCG
JMFN034G14+           CAACATCAAAGATATCATCTTTTCGGCCGACCCTCACCCAACACACAAGTACAGTTCCCG
JMFF009G01+           CAACATCAAAGATATCATCTTTTCGGCCGACCCTCACCCAACACACAAGTACAGTTCCCG
JMFF019F07+           CAACATCAAAGATATCATCTTTTCGGCCGACCCTCACCCAACACACAAGTACAGTTCCCG
JMFF021L19+           CAACATCAAAGATATCATCTTTTCGGCCGACCCTCACCCAACACACAAGTACAGTTCCCG
                      ____________________________________________________________
consensus             CAACATCAAAGATATCATCTTTTCGGCCGACCCTCACCCAACACACAAGTACAGTTCCCG
 
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JMFN044H15+           AATCCTCTAACCCCGAAACTTCACACTCAATGCCAAAAAGAACCCT              
JMFN034G14+           AATCCTCTAACCCCGAAACTTCACACTCAATGCCAAAAAGAACCCT              
JMFF009G01+           AATCCTCTAACCCCGAAACTTCACACTCAATGCCAAAAAGAACCCT              
JMFF019F07+           AATCCTCTAACCCCGAAACTTCACACTCAATGCCAAAAAGAACCCT              
JMFF021L19+           AATCCTCTAACCCCGAAACTTCACACTCAATGCCAAAAAGAACCCTAGGAGAAGTGACAG
                      ____________________________________________________________
consensus             AATCCTCTAACCCCGAAACTTCACACTCAATGCCAAAAAGAACCCTAGGAGAAGTGACAG
 
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JMFF021L19+           TGTTAATACCGAACAATTAACGGGCTAATATAGTTATATAATACAGTTAACTACGGAGGA
                      ____________________________________________________________
consensus             TGTTAATACCGAACAATTAACGGGCTAATATAGTTATATAATACAGTTAACTACGGAGGA
 
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JMFF021L19+           GTAATATGAGGTGGCCGGCGACGGTGATCGGTCTCTGTACGACGGGGCCTTGATTTGGAA
                      ____________________________________________________________
consensus             GTAATATGAGGTGGCCGGCGACGGTGATCGGTCTCTGTACGACGGGGCCTTGATTTGGAA
 
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JMFF021L19+           AGTTTTGGACAAGGTCATGATGAACCTGAGAACTGAGAGGTACTTAAAATTGATTGATCA
                      ____________________________________________________________
consensus             AGTTTTGGACAAGGTCATGATGAACCTGAGAACTGAGAGGTACTTAAAATTGATTGATCA
 
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JMFF021L19+           AACAGTGACCATTAATAATACCAATGACTCATGGGCACTCAATTCTTTAAATTGACTCGC
                      ____________________________________________________________
consensus             AACAGTGACCATTAATAATACCAATGACTCATGGGCACTCAATTCTTTAAATTGACTCGC