List of clones in pair P017663.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003N06Sequence627002212 (16)ref|NP_001274887.1|5e-55cytochrome b-c1 complex subunit 7 [Solanum tuberosum] sp|P48502.1|QCR7_SOLTU Rec721002212 (16)ref|NP_001274887.1|1e-54cytochrome b-c1 complex subunit 7 [Solanum tuberosum] sp|P48502.1|QCR7_SOLTU Rec
JMFF018P11Sequence583002212 (16)ref|NP_001274887.1|3e-47cytochrome b-c1 complex subunit 7 [Solanum tuberosum] sp|P48502.1|QCR7_SOLTU Rec663002212 (16)ref|NP_001274887.1|8e-55cytochrome b-c1 complex subunit 7 [Solanum tuberosum] sp|P48502.1|QCR7_SOLTU Rec
JMFN004P01Sequence624002212 (16)ref|NP_001274887.1|5e-55cytochrome b-c1 complex subunit 7 [Solanum tuberosum] sp|P48502.1|QCR7_SOLTU Rec
JMFN006O03Sequence640002212 (16)ref|NP_001274887.1|6e-55cytochrome b-c1 complex subunit 7 [Solanum tuberosum] sp|P48502.1|QCR7_SOLTU Rec
JMFN008A11Sequence622002212 (16)ref|XP_007013811.1|4e-41Cytochrome bd ubiquinol oxidase, 14kDa subunit [Theobroma cacao] gb|EOY31430.1|
JMFN014K21Sequence640002212 (16)ref|NP_001274887.1|6e-55cytochrome b-c1 complex subunit 7 [Solanum tuberosum] sp|P48502.1|QCR7_SOLTU Rec
JMFN033O01Sequence629002212 (16)ref|NP_001274887.1|5e-55cytochrome b-c1 complex subunit 7 [Solanum tuberosum] sp|P48502.1|QCR7_SOLTU Rec
JMFN039P01Sequence624002212 (16)ref|NP_001274887.1|5e-55cytochrome b-c1 complex subunit 7 [Solanum tuberosum] sp|P48502.1|QCR7_SOLTU Rec
JMSF011H17Sequence449002212 (16)ref|NP_001274887.1|6e-56cytochrome b-c1 complex subunit 7 [Solanum tuberosum] sp|P48502.1|QCR7_SOLTU Rec717002212 (16)ref|NP_001274887.1|1e-54cytochrome b-c1 complex subunit 7 [Solanum tuberosum] sp|P48502.1|QCR7_SOLTU Rec
JMSF021F11Sequence669002212 (16)ref|NP_001274887.1|8e-55cytochrome b-c1 complex subunit 7 [Solanum tuberosum] sp|P48502.1|QCR7_SOLTU Rec738002212 (16)ref|NP_001274887.1|2e-54cytochrome b-c1 complex subunit 7 [Solanum tuberosum] sp|P48502.1|QCR7_SOLTU Rec
JMSF049K14Sequence699002212 (16)ref|NP_001274887.1|1e-54cytochrome b-c1 complex subunit 7 [Solanum tuberosum] sp|P48502.1|QCR7_SOLTU Rec697002212 (16)ref|NP_001274887.1|1e-54cytochrome b-c1 complex subunit 7 [Solanum tuberosum] sp|P48502.1|QCR7_SOLTU Rec

Contig 2212 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig002212============================================ 788         
  51     ------------------------------------------------------------------------------>JMFF003N06                    
           <-------------------------------------------------------------------------------------------rJMFF003N06  
  51 ------------------------------------------------------------------------------------>JMSF021F11                  
     <---------------------------------------------------------------------------------------------rJMSF021F11  
  76    -------------------------------------------------------->JMSF011H17                                           
        <-----------------------------------------------------------------------------------------rJMSF011H17  
  84     ---------------------------------------------------------------------------------------->JMSF049K14          
          <---------------------------------------------------------------------------------------rJMSF049K14  
 124     ------------------------------------------------------------------------->JMFF018P11                         
         <-----------------------------------------------------------------------------------rJMFF018P11

The following clones don't have the opposite end in this pair.

           ------------------------------------------------------------------------------>JMFN039P01-                 
          ------------------------------------------------------------------------------->JMFN033O01-                 
           ------------------------------------------------------------------------------>JMFN004P01-                 
                          ------------------------------------------------------------------------------>JMFN008A11-  
           -------------------------------------------------------------------------------->JMFN006O03-               
          -------------------------------------------------------------------------------->JMFN014K21-