Contig 002212:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003N06Sequence627002212 (16)ref|NP_001274887.1|5e-55cytochrome b-c1 complex subunit 7 [Solanum tuberosum] sp|P48502.1|QCR7_SOLTU Rec721002212 (16)ref|NP_001274887.1|1e-54cytochrome b-c1 complex subunit 7 [Solanum tuberosum] sp|P48502.1|QCR7_SOLTU Rec
JMFF018P11Sequence583002212 (16)ref|NP_001274887.1|3e-47cytochrome b-c1 complex subunit 7 [Solanum tuberosum] sp|P48502.1|QCR7_SOLTU Rec663002212 (16)ref|NP_001274887.1|8e-55cytochrome b-c1 complex subunit 7 [Solanum tuberosum] sp|P48502.1|QCR7_SOLTU Rec
JMFN004P01Sequence624002212 (16)ref|NP_001274887.1|5e-55cytochrome b-c1 complex subunit 7 [Solanum tuberosum] sp|P48502.1|QCR7_SOLTU Rec
JMFN006O03Sequence640002212 (16)ref|NP_001274887.1|6e-55cytochrome b-c1 complex subunit 7 [Solanum tuberosum] sp|P48502.1|QCR7_SOLTU Rec
JMFN008A11Sequence622002212 (16)ref|XP_007013811.1|4e-41Cytochrome bd ubiquinol oxidase, 14kDa subunit [Theobroma cacao] gb|EOY31430.1|
JMFN014K21Sequence640002212 (16)ref|NP_001274887.1|6e-55cytochrome b-c1 complex subunit 7 [Solanum tuberosum] sp|P48502.1|QCR7_SOLTU Rec
JMFN033O01Sequence629002212 (16)ref|NP_001274887.1|5e-55cytochrome b-c1 complex subunit 7 [Solanum tuberosum] sp|P48502.1|QCR7_SOLTU Rec
JMFN039P01Sequence624002212 (16)ref|NP_001274887.1|5e-55cytochrome b-c1 complex subunit 7 [Solanum tuberosum] sp|P48502.1|QCR7_SOLTU Rec
JMSF011H17Sequence449002212 (16)ref|NP_001274887.1|6e-56cytochrome b-c1 complex subunit 7 [Solanum tuberosum] sp|P48502.1|QCR7_SOLTU Rec717002212 (16)ref|NP_001274887.1|1e-54cytochrome b-c1 complex subunit 7 [Solanum tuberosum] sp|P48502.1|QCR7_SOLTU Rec
JMSF021F11Sequence669002212 (16)ref|NP_001274887.1|8e-55cytochrome b-c1 complex subunit 7 [Solanum tuberosum] sp|P48502.1|QCR7_SOLTU Rec738002212 (16)ref|NP_001274887.1|2e-54cytochrome b-c1 complex subunit 7 [Solanum tuberosum] sp|P48502.1|QCR7_SOLTU Rec
JMSF049K14Sequence699002212 (16)ref|NP_001274887.1|1e-54cytochrome b-c1 complex subunit 7 [Solanum tuberosum] sp|P48502.1|QCR7_SOLTU Rec697002212 (16)ref|NP_001274887.1|1e-54cytochrome b-c1 complex subunit 7 [Solanum tuberosum] sp|P48502.1|QCR7_SOLTU Rec

Alignment

This contig is upended


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JMFN008A11+                                                               TTTTTTTT
                      ____________________________________________________________
consensus                                                                 TTTTTTTT
 
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JMFN008A11+           GAACACAGAATGCGTAAGTTTTTATTTCATGTCATCATTGTCAAAAAAGAATCAAGCTCA
rJMFF003N06-                         AAGTTTTTATTTCATGTCATCATTGTCAAAAAAGAATCAAGCTCA
JMSF049K14+                                                            AATCAAGCTCA
rJMSF049K14-                                                     AAAAAGAATCAAGCTCA
rJMSF011H17-                                                     AAAAAGAATCAAGCTCA
rJMSF021F11-                                                     AAAAAGAATCAAGCTCA
                      ____________________________________________________________
consensus             GAACACAGAATGCGTAAGTTTTTATTTCATGTCATCATTGTCAAAAAAGAATCAAGCTCA
 
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JMFN008A11+           ATAACTGACGGGATCAAGGAAAACTAGCAATAAAGGAAAATCCAATGCCTCTGTAGTCTG
rJMFF003N06-          ATAACTGACGGGATCAAGGAAAACTAGCAATAAAGGAAAATCCAATGCCTCTGTAGTCTG
JMSF049K14+           ATAACTGACGGGATCAAGGAAAACTAGCAATAAAGGAAAATCCAATGCCTCTGTAGTCTG
rJMSF049K14-          ATAACTGACGGGATCAAGGAAAACTAGCAATAAAGGAAAATCCAATGCCTCTGTAGTCTG
rJMFF018P11-                                       ATAAAGGAAAATCCAATGCCTCTGTAGTCTG
JMFN014K21+                                                       ATGCCTCTGTAGTCTG
JMFN006O03+                                        ATAAAGGAAAATCCAATGCCTCTGTAGTCTG
JMFN004P01+                                                            TCTGTAGTCTG
JMFN033O01+                                                                TAGTCTG
JMFN039P01+                                                            TCTGTAGTCTG
rJMSF011H17-          ATAACTGACGGGATCAAGGAAAACTAGCAATAAAGGAAAATCCAATGCCTCTGTAGTCTG
rJMSF021F11-          ATAACTGACGGGATCAAGGAAAACTAGCAATAAAGGAAAATCCAATGCCTCTGTAGTCTG
JMSF021F11+                                                             CTGTAGTCTG
                      ____________________________________________________________
consensus             ATAACTGACGGGATCAAGGAAAACTAGCAATAAAGGAAAATCCAATGCCTCTGTAGTCTG
 
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JMFN008A11+           TATTGAACATTTTAAAGTACGGTAGAGAAACCATCAAAGATGACCGAGCTAATAGATGTT
rJMFF003N06-          TATTGAACATTTTAAAGTACGGTAGAGAAACCATCAAAGATGACCGAGCTAATAGATGTT
JMSF049K14+           TATTGAACATTTTAAAGTACGGTAGAGAAACCATCAAAGATGACCGAGCTAATAGATGTT
rJMSF049K14-          TATTGAACATTTTAAAGTACGGTAGAGAAACCATCAAAGATGACCGAGCTAATAGATGTT
rJMFF018P11-          TATTGAACATTTTAAAGTACGGTAGAGAAACCATCAAAGATGACCGAGCTAATAGATGTT
JMFN014K21+           TATTGAACATTTTAAAGTACGGTAGAGAAACCATCAAAGATGACCGAGCTAATAGATGTT
JMFN006O03+           TATTGAACATTNTAAAGTACGGTAGAGAAACCATCAAAGATGACCGAGCTAATAGATGTT
JMFN004P01+           TATTGAACATTTTAAAGTACGGTAGAGAAACCATCAAAGATGACCGAGCTAATAGATGTT
JMFN033O01+           TATTGAACATTTNAAAGTACGGTAGAGAAACCATCAAAGATGACCGAGCTAATAGATGTT
JMFF003N06+                    TTTTAAAGTACGGTAGAGAAACCATCAAAGATGACCGAGCTAATAGATGTT
JMFN039P01+           TATGNAACATTTTAAAGTACGGTAGAGAAACCATCAAAGATGACCGAGCTAATAGATGTT
JMFF018P11+                                                             AATAGATGTT
rJMSF011H17-          TATTGAACATTTTAAAGTACGGTAGAGAAACCATCAAAGATGACCGAGCTAATAGATGTT
rJMSF021F11-          TATTGAACATTTTAAAGTACGGTAGAGAAACCATCAAAGATGACCGAGCTAATAGATGTT
JMSF021F11+           TATTGAACATTTTAAAGTACGGTAGAGAAACCATCAAAGATGACCGAGCTAATAGATGTT
                      ____________________________________________________________
consensus             TATTGAACATTTTAAAGTACGGTAGAGAAACCATCAAAGATGACCGAGCTAATAGATGTT
 
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JMFN008A11+           TGGCATCAGTAACAAATTTCTGACATAATACATTCTTGAAATGGAGATCTTGTATAGATA
rJMFF003N06-          TGGCATCAGTAACAAATTTCTGACATAATACATTCTTGAAATGGAGATCTTGTATAGATA
JMSF049K14+           TGGCATCAGTAACAAATTTCTGACATAATACATTCTTGAAATGGAGATCTTGTATAGATA
rJMSF049K14-          TGGCATCAGTAACAAATTTCTGACATAATACATTCTTGAAATGGAGATCTTGTATAGATA
rJMFF018P11-          TGGCATCAGTAACAAATTTCTGACATAATACATTCTTGAAATGGAGATCTTGTATAGATA
JMFN014K21+           TGGCATCAGTAACAAATTTCTGACATAATACATTCTTGAAATGGAGATCTTGTATAGATA
JMFN006O03+           TGGCATCAGTAACAAATTTCTGACATAATACATTCTTGAAATGGAGATCTTGTATAGATA
JMFN004P01+           TGGCATCAGTAACAAATTTCTGACATAATACATTCTTGAAATGGAGATCTTGTATAGATA
JMFN033O01+           TGGCATCAGTAACAAATTTCTGACATAATACATTCTTGAAATGGAGATCTNGTATAGATA
JMFF003N06+           TGGCATCAGTAACAAATTTCTGACATAATACATTCTTGAAATGGAGATCTTGTATAGATA
JMFN039P01+           TGGCATCAGTAACAAATTTCTGACATAATACATTCTTGAAATGGAGATCTTGTATAGATA
JMFF018P11+           TGGCATCAGTAACAAATTTCTGACATAATACATTCTTGAAATGGAGATCTTGTATAGATA
rJMSF011H17-          TGGCATCAGTAACAAATTTCTGACATAATACATTCTTGAAATGGAGATCTTGTATAGATA
rJMSF021F11-          TGGCATCAGTAACAAATTTCTGACATAATACATTCTTGAAATGGAGATCTTGTATAGATA
JMSF021F11+           TGGCATCAGTAACAAATTTCTGACATAATACATTCTTGAAATGGAGATCTTGTATAGATA
                      ____________________________________________________________
consensus             TGGCATCAGTAACAAATTTCTGACATAATACATTCTTGAAATGGAGATCTTGTATAGATA
 
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JMFN008A11+           CCGTGCTTGTGCTTATTCTTCCATACCCATACATAGAATATACGCTTGCCTTCATTGGCA
rJMFF003N06-          CCGTGCTTGTGCTTATTCTTCCATACCCATACATAGAATATACGCTTGCCTTCATTGGCA
JMSF049K14+           CCGTGCTTGTGCTTATTCTTCCATACCCATACATAGAATATACGCTTGCCTTCATTGGCA
rJMSF049K14-          CCGTGCTTGTGCTTATTCTTCCATACCCATACATAGAATATACGCTTGCCTTCATTGGCA
rJMFF018P11-          CCGTGCTTGTGCTTATTCTTCCATACCCATACATAGAATATACGCTTGCCTTCATTGGCA
JMFN014K21+           CCGTGCTTGTGCTTATTCTTCCATACCCATACATAGAATATACGCTTGCCTTCATTGGCA
JMFN006O03+           CCGTGCTTGTGCTTATTCTTCCATACCCATACATAGAATATACGCTTGCCTTCATTGGCA
JMFN004P01+           CCGTGCTTGTGCTTATTCTTCCATACCCATACATAGAATATACGCTTGCCTTCATTGGCA
JMFN033O01+           CCGTGCTTGTGCTTATTCTTCCATACCCATACATAGAATATACGCTTGCCTTCATTGGCA
JMFF003N06+           CCGTGCTTGTGCTTATTCTTCCATACCCATACATAGAATATACGCTTGCCTTCATTGGCA
JMFN039P01+           CCGTGCTTGTGCTTATTCTTCCATACCCATACATAGAATATACGCTTGCCTTCATTGGCA
JMFF018P11+           CCGTGCTTGTGCTTATTCTTCCATACCCATACATAGAATATACGCTTGCCTTCATTGGCA
rJMSF011H17-          CCGTGCTTGTGCTTATTCTTCCATACCCATACATAGAATATACGCTTGCCTTCATTGGCA
rJMSF021F11-          CCGTGCTTGTGCTTATTCTTCCATACCCATACATAGAATATACGCTTGCCTTCATTGGCA
JMSF021F11+           CCGTGCTTGTGCTTATTCTTCCATACCCATACATAGAATATACGCTTGCCTTCATTGGCA
                      ____________________________________________________________
consensus             CCGTGCTTGTGCTTATTCTTCCATACCCATACATAGAATATACGCTTGCCTTCATTGGCA
 
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JMFN008A11+           GCAAGACAACAAGGAAAATTGCATTAAGGAATTGTGCGCTGATAGAGAGGTAGGGCCCCC
rJMFF003N06-          GCAAGACAACAAGGAAAATTGCATTAAGGAATTGTGCGCTGATAGAGAGGTAGGGCCCCC
JMSF049K14+           GCAAGACAACAAGGAAAATTGCATTAAGGAATTGTGCGCTGATAGAGAGGTAGGGCCCCC
rJMSF049K14-          GCAAGACAACAAGGAAAATTGCATTAAGGAATTGTGCGCTGATAGAGAGGTAGGGCCCCC
rJMFF018P11-          GCAAGACAACAAGGAAAATTGCATTAAGGAATTGTGCGCTGATAGAGAGGTAGGGCCCCC
JMFN014K21+           GCAAGACAACAAGGAAAATTGCATTAAGGAATTGTGCGCTGATAGAGAGGTAGGGCCCCC
JMFN006O03+           GCAAGACAACAAGGAAAATTGCATTAAGGAATTGTGCGCTGATAGAGAGGTAGGGCCCCC
JMFN004P01+           GCAAGACAACAAGGAAAATTGCATTAAGGAATTGTGCGCTGATAGAGAGGTAGGGCCCCC
JMFN033O01+           GCAAGACAACAAGGAAAATTGCATTAAGGAATTGTGCGCTGATAGAGAGGTAGGGCCCCC
JMFF003N06+           GCAAGACAACAAGGAAAATTGCATTAAGGAATTGTGCGCTGATAGAGAGGTAGGGCCCCC
JMFN039P01+           GCAAGACAACAAGGAAAATTGCATTAAGGAATTGTGCGCTGATAGAGAGGTAGGGCCCCC
JMFF018P11+           GCAAGACAACAAGGAAAATTGCATTAAGGAATTGTGCGCTGATAGAGAGGTAGGGCCCCC
JMSF011H17+                    CAAGGAAAATTGCATTAAGGAATTGTGCGCTGATAGAGAGGTAGGGCCCCC
rJMSF011H17-          GCAAGACAACAAGGAAAATTGCATTAAGGAATTGTGCGCTGATAGAGAGGTAGGGCCCCC
rJMSF021F11-          GCAAGACAACAAGGAAAATTGCATTAAGGAATTGTGCGCTGATAGAGAGGTAGGGCCCCC
JMSF021F11+           GCAAGACAACAAGGAAAATTGCATTAAGGAATTGTGCGCTGATAGAGAGGTAGGGCCCCC
                      ____________________________________________________________
consensus             GCAAGACAACAAGGAAAATTGCATTAAGGAATTGTGCGCTGATAGAGAGGTAGGGCCCCC
 
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JMFN008A11+           AAAG-CCTCACGTTCTGCTCTCTCTTTCTTCACAATGGCCAACATATCCTGAAGATAGTT
rJMFF003N06-          AAAG-CCTCACGTTCTGCTCTCTCTTTCTTCACAATGGCCAACATATCCTGAAGATAGTT
JMSF049K14+           AAAG-CCTCACGTTCTGCTCTCTCTTTCTTCACAATGGCCAACATATCCTGAAGATAGTT
rJMSF049K14-          AAAG-CCTCACGTTCTGCTCTCTCTTTCTTCACAATGGCCAACATATCCTGAAGATAGTT
rJMFF018P11-          AAAG-CCTCACGTTCTGCTCTCTCTTTCTTCACAATGGCCAACATATCCTGAAGATAGTT
JMFN014K21+           AAAG-CCTCACGTTCTGCTCTCTCTTTCTTCACAATGGCCAACATATCCTGAAGATAGTT
JMFN006O03+           AAAG-CCTCACGTTCTGCTCTCTCTTTCTTCACAATGGCCAACATATCCTGAAGATAGTT
JMFN004P01+           AAAG-CCTCACGTTCTGCTCTCTCTTTCTTCACAATGGCCAACATATCCTGAAGATAGTT
JMFN033O01+           AAAG-CCTCACGTTCTGCTCTCTCTTTCTTCACAATGGCCAACATATCCTGAAGATAGTT
JMFF003N06+           AAAG-CCTCACGTTCTGCTCTCTCTTTCTTCACAATGGCCAACATATCCTGAAGATAGTT
JMFN039P01+           AAAG-CCTCACGTTCTGCTCTCTCTTTCTTCACAATGGCCAACATATCCTGAAGATAGTT
JMFF018P11+           AAAGCCCTCACGTTCTGCTCTCTCTTTCTTCACAATGGCCAACATATCCTGAAGATAGTT
JMSF011H17+           AAAG-CCTCACGTTCTGCTCTCTCTTTCTTCACAATGGCCAACATATCCTGAAGATAGTT
rJMSF011H17-          AAAG-CCTCACGTTCTGCTCTCTCTTTCTTCACAATGGCCAACATATCCTGAAGATAGTT
rJMSF021F11-          AAAG-CCTCACGTTCTGCTCTCTCTTTCTTCACAATGGCCAACATATCCTGAAGATAGTT
JMSF021F11+           AAAG-CCTCACGTTCTGCTCTCTCTTTCTTCACAATGGCCAACATATCCTGAAGATAGTT
                      ____________________________________________________________
consensus             AAAG-CCTCACGTTCTGCTCTCTCTTTCTTCACAATGGCCAACATATCCTGAAGATAGTT
 
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JMFN008A11+           TCTAAATGGCGTCTGCATTGCCTGAAGGTCCTCTGGGAGGTACAAATGCTTCATTGAGAG
rJMFF003N06-          TCTAAATGGCGTCTGCATTGCCTGAAGGTCCTCTGGGAGGTACAAATGCTTCATTGAGAG
JMSF049K14+           TCTAAATGGCGTCTGCATTGCCTGAAGGTCCTCTGGGAGGTACAAATGCTTCATTGAGAG
rJMSF049K14-          TCTAAATGGCGTCTGCATTGCCTGAAGGTCCTCTGGGAGGTACAAATGCTTCATTGAGAG
rJMFF018P11-          TCTAAATGGCGTCTGCATTGCCTGAAGGTCCTCTGGGAGGTACAAATGCTTCATTGAGAG
JMFN014K21+           TCTAAATGGCGTCTGCATTGCCTGAAGGTCCTCTGGGAGGTACAAATGCTTCATTGAGAG
JMFN006O03+           TCTAAATGGCGTCTGCATTGCCTGAAGGTCCTCTGGGAGGTACAAATGCTTCATTGAGAG
JMFN004P01+           TCTAAATGGCGTCTGCATTGCCTGAAGGTCCTCTGGGAGGTACAAATGCTTCATTGAGAG
JMFN033O01+           TCTAAATGGCGTCTGCATTGCCTGAAGGTCCTCTGGGAGGTACAAATGCTTCATTGAGAG
JMFF003N06+           TCTAAATGGCGTCTGCATTGCCTGAAGGTCCTCTGGGAGGTACAAATGCTTCATTGAGAG
JMFN039P01+           TCTAAATGGCGTCTGCATTGCCTGAAGGTCCTCTGGGAGGTACAAATGCTTCATTGAGAG
JMFF018P11+           TCTAAATGGCGTCTGCATTGCCTGAAGGTCCTCTGGGAGGTACAAATGCTTCATTGAGAG
JMSF011H17+           TCTAAATGGCGTCTGCATTGCCTGAAGGTCCTCTGGGAGGTACAAATGCTTCATTGAGAG
rJMSF011H17-          TCTAAATGGCGTCTGCATTGCCTGAAGGTCCTCTGGGAGGTACAAATGCTTCATTGAGAG
rJMSF021F11-          TCTAAATGGCGTCTGCATTGCCTGAAGGTCCTCTGGGAGGTACAAATGCTTCATTGAGAG
JMSF021F11+           TCTAAATGGCGTCTGCATTGCCTGAAGGTCCTCTGGGAGGTACAAATGCTTCATTGAGAG
                      ____________________________________________________________
consensus             TCTAAATGGCGTCTGCATTGCCTGAAGGTCCTCTGGGAGGTACAAATGCTTCATTGAGAG
 
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JMFN008A11+           GTCCATGGCGCGCTTGAGACGCTGGTTCCGGGCATCGACAATCTCCCTAGGCAGCCGATT
rJMFF003N06-          GTCCATGGCGCGCTTGAGACGCTGGTTCCGGGCATCGACAATCTCCCTAGGCAGCCGATT
JMSF049K14+           GTCCATGGCGCGCTTGAGACGCTGGTTCCGGGCATCGACAATCTCCCTAGGCAGCCGATT
rJMSF049K14-          GTCCATGGCGCGCTTGAGACGCTGGTTCCGGGCATCGACAATCTCCCTAGGCAGCCGATT
rJMFF018P11-          GTCCATGGCGCGCTTGAGACGCTGGTTCCGGGCATCGACAATCTCCCTAGGCAGCCGATT
JMFN014K21+           GTCCATGGCGCGCTTGAGACGCTGGTTCCGGGCATCGACAATCTCCCTAGGCAGCCGATT
JMFN006O03+           GTCCATGGCGCGCTTGAGACGCTGGTTCCGGGCATCGACAATCTCCCTAGGCAGCCGATT
JMFN004P01+           GTCCATGGCGCGCTTGAGACGCTGGTTCCGGGCATCGACAATCTCCCTAGGCAGCCGATT
JMFN033O01+           GTCCATGGCGCGCTTGAGACGCTGGTTCCGGGCATCGACAATCTCCCTAGGCAGCCGATT
JMFF003N06+           GTCCATGGCGCGCTTGAGACGCTGGTTCCGGGCATCGACAATCTCCCTAGGCAGCCGATT
JMFN039P01+           GTCCATGGCGCGCTTGAGACGCTGGTTCCGGGCATCGACAATCTCCCTAGGCAGCCGATT
JMFF018P11+           GTCCATGGCGCGCTTGAGACGCTGGTTCCGGGCATCGACAATCTCCCTAGGCAGCCGATT
JMSF011H17+           GTCCATGGCGCGCTTGAGACGCTGGTTCCGGGCATCGACAATCTCCCTAGGCAGCCGATT
rJMSF011H17-          GTCCATGGCGCGCTTGAGACGCTGGTTCCGGGCATCGACAATCTCCCTAGGCAGCCGATT
rJMSF021F11-          GTCCATGGCGCGCTTGAGACGCTGGTTCCGGGCATCGACAATCTCCCTAGGCAGCCGATT
JMSF021F11+           GTCCATGGCGCGCTTGAGACGCTGGTTCCGGGCATCGACAATCTCCCTAGGCAGCCGATT
                      ____________________________________________________________
consensus             GTCCATGGCGCGCTTGAGACGCTGGTTCCGGGCATCGACAATCTCCCTAGGCAGCCGATT
 
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JMFN008A11+           CAGAGCTTCCTTGATGTCCAGATCGTAATACGGATCGTACAAGTCATCGTATCTCAGACC
rJMFF003N06-          CAGAGCTTCCTTGATGTCCAGATCGTAATACGGATCGTACAAGTCATCGTATCTCAGACC
JMSF049K14+           CAGAGCTTCCTTGATGTCCAGATCGTAATACGGATCGTACAAGTCATCGTATCTCAGACC
rJMSF049K14-          CAGAGCTTCCTTGATGTCCAGATCGTAATACGGATCGTACAAGTCATCGTATCTCAGACC
rJMFF018P11-          CAGAGCTTCCTTGATGTCCAGATCGTAATACGGATCGTACAAGTCATCGTATCTCAGACC
JMFN014K21+           CAGAGCTTCCTTGATGTCCAGATCGTAATACGGATCGTACAAGTCATCGTATCTCAGACC
JMFN006O03+           CAGAGCTTCCTTGATGTCCAGATCGTAATACGGATCGTACAAGTCATCGTATCTCAGACC
JMFN004P01+           CAGAGCTTCCTTGATGTCCAGATCGTAATACGGATCGTACAAGTCATCGTATCTCAGACC
JMFN033O01+           CAGAGCTTCCTTGATGTCCAGATCGTAATACGGATCGTACAAGTCATCGTATCTCAGACC
JMFF003N06+           CAGAGCTTCCTTGATGTCCAGATCGTAATACGGATCGTACAAGTCATCGTATCTCAGACC
JMFN039P01+           CAGAGCTTCCTTGATGTCCAGATCGTAATACGGATCGTACAAGTCATCGTATCTCAGACC
JMFF018P11+           CAGAGCTTCCTTGATGTCCAGATCGTAATACGGATCGTACAAGTCATCGTATCTCAGACC
JMSF011H17+           CAGAGCTTCCTTGATGTCCAGATCGTAATACGGATCGTACAAGTCATCGTATCTCAGACC
rJMSF011H17-          CAGAGCTTCCTTGATGTCCAGATCGTAATACGGATCGTACAAGTCATCGTATCTCAGACC
rJMSF021F11-          CAGAGCTTCCTTGATGTCCAGATCGTAATACGGATCGTACAAGTCATCGTATCTCAGACC
JMSF021F11+           CAGAGCTTCCTTGATGTCCAGATCGTAATACGGATCGTACAAGTCATCGTATCTCAGACC
                      ____________________________________________________________
consensus             CAGAGCTTCCTTGATGTCCAGATCGTAATACGGATCGTACAAGTCATCGTATCTCAGACC
 
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JMFN008A11+           GTATTTGCGGAGGCG                                             
rJMFF003N06-          GTATTTGCGGAGGCGAGAATCGAGGGTTTTCTTATGGATAGCGGCGAGAGGGTTCCTCTT
JMSF049K14+           GTATTTGCGGAGGCGAGAATCGAGGGTTTTCTTATGGATAGCGGCGAGAGGGTTCCTCTT
rJMSF049K14-          GTATTTGCGGAGGCGAGAATCGAGGGTTTTCTTATGGATAGCGGCGAGAGGGTTCCTCTT
rJMFF018P11-          GTATTTGCGGAGGCGAGAATCGAGGGTTTTCTTATGGATAGCGGCGAGAGGGTTCCTCTT
JMFN014K21+           GTATTTGCGGAGGCGAGAATCGAGGGTTTTCTTATGGATAGCGGCGAGAGGGTTCCTCTT
JMFN006O03+           GTATTTGCGGAGGCGAGAATCGAGGGTTTTCTTATGGATAGCGGCGAGAGGGTTCCTCTT
JMFN004P01+           GTATTTGCGGAGGCGAGAATCGAGGGTTTTCTTATGGATAGCGGCGAGAGGGTTCCTCTT
JMFN033O01+           GTATTTGCGGAGGCGAGAATCGAGGGTTTTCTTATGGATAGCGGCGAGAGGGTTCCTCTT
JMFF003N06+           GTATTTGCGGAGGCGAGAATCGAGGGTTTTCTTATGGATAGCGGCGAGAGGGTTCCTCTT
JMFN039P01+           GTATTTGCGGAGGCGAGAATCGAGGGTTTTCTTATGGATAGCGGCGAGAGGGTTCCTCTT
JMFF018P11+           GTATTTGCGGAGGCGAGAATCGAGGGTTTTCTTATGGATAGCGGCGAGAGGGTTCCTCTT
JMSF011H17+           GTATTTGCGGAGGCGAGAATCGAGGGTTTTCTTATGGATAGCGGCGAGAGGGTTCCTCTT
rJMSF011H17-          GTATTTGCGGAGGCGAGAATCGAGGGTTTTCTTATGGATAGCGGCGAGAGGGTTCCTCTT
rJMSF021F11-          GTATTTGCGGAGGCGAGAATCGAGGGTTTTCTTATGGATAGCGGCGAGAGGGTTCCTCTT
JMSF021F11+           GTATTTGCGGAGGCGAGAATCGAGGGTTTTCTTATGGATAGCGGCGAGAGGGTTCCTCTT
                      ____________________________________________________________
consensus             GTATTTGCGGAGGCGAGAATCGAGGGTTTTCTTATGGATAGCGGCGAGAGGGTTCCTCTT
 
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rJMFF003N06-          TGGATCTACGAGCCACCGCGAGAACGACGACATCGCCATTTTCTAGGGTTCTTCTTTGAG
JMSF049K14+           TGGGTCTACGAGCCACCGCGAGAACGACGACATCGCCATTTTCTAGGGTTCTTCTTTGAG
rJMSF049K14-          TGGGTCTACGAGCCACCGCGAGAACGACGACATCGCCATTTTCTAGGGTTCTTCTTTGAG
rJMFF018P11-          TGGATCTACGAGCCACCGCGAGAACGACGACATCGCCATTTTCTAGGGTTCTTCTTTGAG
JMFN014K21+           TGGATCTACGAGCCACCGCGAGAACGACGACATCGCCATTTTCTAGGGTTCTTCTTTGAG
JMFN006O03+           TGGATCTACGAGCCACCGCGAGAACGACGACATCGCCATTTTCTAGGGTTCTTCTTTGAG
JMFN004P01+           TGGATCTACGAGCCACCGCGAGAACGACGACATCGCCATTTTCTAGGGTTCTTCTTTGAG
JMFN033O01+           TGGATCTACGAGCCACCGCGAGAACGACGACATCGCCATTTTCTAGGGTTCTTCTTTGAG
JMFF003N06+           TGGATCTACGAGCCACCGCGAGAACGACGACATCGCCATTTTCTAGGGTTCTTCTTTGAG
JMFN039P01+           TGGATCTACGAGCCACCGCGAGAACGACGACATCGCCATTTTCTAGGGTTCTTCTTTGAG
JMFF018P11+           TGGATCTACGAGCCACCGCGAGAACGACGACATCGCCATTTTCTAGGGTTCTTCTTTGAG
JMSF011H17+           TGGATCTACGAGCCACCGCGAGAACGACGACATCGCCATTTTCTAGGGTTCTTCTTTGAG
rJMSF011H17-          TGGATCTACGAGCCACCGCGAGAACGACGACATCGCCATTTTCTAGGGTTCTTCTTTGAG
rJMSF021F11-          TGGATCTACGAGCCACCGCGAGAACGACGACATCGCCATTTTCTAGGGTTCTTCTTTGAG
JMSF021F11+           TGGATCTACGAGCCACCGCGAGAACGACGACATCGCCATTTTCTAGGGTTCTTCTTTGAG
                      ____________________________________________________________
consensus             TGGATCTACGAGCCACCGCGAGAACGACGACATCGCCATTTTCTAGGGTTCTTCTTTGAG
 
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rJMFF003N06-          TCAATTTCTCTTTCTCT                                           
JMSF049K14+           TCAATTTCTCTTTCTCTCTCTTGTCTC                                 
rJMSF049K14-          TCAATTTCTCTTTCTCTCT                                         
rJMFF018P11-          TCAATTTCTCTTTCTCTCTCTTGTCTCAGACTC                           
JMFN014K21+           TCAATTTCTCTTTCTCTCTCTTGTC                                   
JMFN006O03+           TCAATTTCTC                                                  
JMFN004P01+           TCAATTTCTCTTTC                                              
JMFN033O01+           TCAATTTCTCTTTCTCTCTCTTG                                     
JMFF003N06+           TCAATTTCTCTTTCTCTCTCTTGTCTCAGACT                            
JMFN039P01+           TCAATTTCTCTTTC                                              
JMFF018P11+           TCAATTTCTCTTTCTCTCTCTTGTCTCAGACTC                           
JMSF011H17+           TCAATTTCTCTTTCTCTCTCTTGTCTCAGACTCGA                         
rJMSF011H17-          TCAATTTCTCTTTCTCTCTCTTGTCTCAGACTCGA                         
rJMSF021F11-          TCAATTTCTCTTTCTCTCTCTTGTCTCAGACTCGATCTAGAAGCCTCTTCTTCCGGACTC
JMSF021F11+           TCAATTTCTCTTTCTCTCTCTTGTCTCAGACTCGATCTAGAAGCCTCTTCTTCCGGACTC
                      ____________________________________________________________
consensus             TCAATTTCTCTTTCTCTCTCTTGTCTCAGACTCGATCTAGAAGCCTCTTCTTCCGGACTC