clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF014B24 | Sequence | 488 | 012394 (12) | ref|XP_010278125.1| | 3e-79 | PREDICTED: 40S ribosomal protein S15-like [Nelumbo nucifera] | 698 | 012394 (12) | ref|XP_010278125.1| | 1e-90 | PREDICTED: 40S ribosomal protein S15-like [Nelumbo nucifera] |
JMFF015A12 | Sequence | 249 | 012394 (12) | gb|ACN30872.1| | 1e-18 | unknown [Zea mays] | |||||
JMFF018F22 | Sequence | 598 | 012394 (12) | ref|XP_010278125.1| | 3e-91 | PREDICTED: 40S ribosomal protein S15-like [Nelumbo nucifera] | 676 | 012394 (12) | ref|XP_010278125.1| | 8e-91 | PREDICTED: 40S ribosomal protein S15-like [Nelumbo nucifera] |
JMFF028L22 | Sequence | 585 | 012394 (12) | ref|XP_010278125.1| | 5e-90 | PREDICTED: 40S ribosomal protein S15-like [Nelumbo nucifera] | 702 | 012394 (12) | ref|XP_010278125.1| | 2e-89 | PREDICTED: 40S ribosomal protein S15-like [Nelumbo nucifera] |
JMFF040E14 | Sequence | 487 | 012394 (12) | ref|XP_010278125.1| | 3e-79 | PREDICTED: 40S ribosomal protein S15-like [Nelumbo nucifera] | 675 | 012394 (12) | ref|XP_010278125.1| | 8e-91 | PREDICTED: 40S ribosomal protein S15-like [Nelumbo nucifera] |
JMFF042M22 | Sequence | 610 | 012394 (12) | ref|XP_010278125.1| | 4e-91 | PREDICTED: 40S ribosomal protein S15-like [Nelumbo nucifera] | 590 | 012394 (12) | ref|XP_002517015.1| | 3e-78 | 40S ribosomal protein S15, putative [Ricinus communis] gb|EEF45178.1| 40S riboso |
JMFN005K04 | Sequence | 590 | 012394 (12) | ref|XP_002517015.1| | 1e-91 | 40S ribosomal protein S15, putative [Ricinus communis] gb|EEF45178.1| 40S riboso |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig012394============================================ 683 2 ---------------------------------------------------------------------->JMFF040E14 <--------------------------------------------------------------------------------------------------rJMFF040E14 7 --------------------------------------------------------------------------------------->JMFF018F22 <--------------------------------------------------------------------------------------------------rJMFF018F22 141 ---------------------------------------------------------------------------------------->JMFF042M22 <----------------------------------------------------------rJMFF042M22 142 ---------------------------------------------------------------------->JMFF014B24 <------------------------------------------------------------------------------rJMFF014B24 142 ------------------------------------------------------------------------------------->JMFF028L22 <------------------------------------------------------------------------------rJMFF028L22
The following clones don't have the opposite end in this pair.
<-----------------------------------rJMFF015A12- ------------------------------------------------------------------------------------->JMFN005K04-