clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF004F02 | Sequence | 486 | 000146 (9) | ref|XP_002284112.1| | 6e-50 | PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Vitis vinifera] emb|CBI15127 | 758 | 000146 (9) | ref|XP_002284112.1| | 5e-36 | PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Vitis vinifera] emb|CBI15127 |
JMFF026N10 | Sequence | 547 | 000146 (9) | ref|XP_002284112.1| | 1e-49 | PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Vitis vinifera] emb|CBI15127 | 758 | 000146 (9) | ref|XP_002317963.2| | 2e-16 | hypothetical protein POPTR_0012s06720g [Populus trichocarpa] gb|EEE96183.2| hypo |
JMFF049D23 | Sequence | 630 | 000146 (9) | ref|XP_002284112.1| | 9e-50 | PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Vitis vinifera] emb|CBI15127 | 651 | 000146 (9) | |||
JMFN038A01 | Sequence | 633 | 000146 (9) | ref|XP_002284112.1| | 2e-49 | PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Vitis vinifera] emb|CBI15127 | |||||
JMSF045F02 | Sequence | 698 | 000146 (9) | ref|XP_002284112.1| | 4e-49 | PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Vitis vinifera] emb|CBI15127 | 775 | 000146 (9) | ref|XP_002284112.1| | 1e-43 | PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Vitis vinifera] emb|CBI15127 |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig000146============================================1099 1 ------------------------------------------------->JMFF026N10 <--------------------------------------------------------------------rJMFF026N10 239 -------------------------------------------------------->JMFF049D23 <-------------------------------------------------------rJMFF049D23 260 ------------------------------------------->JMFF004F02 <--------------------------------------------------------------------rJMFF004F02 282 --------------------------------------------------------------->JMSF045F02 <----------------------------------------------------------------------rJMSF045F02
The following clones don't have the opposite end in this pair.
------------------------------------------------------>JMFN038A01-