| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004F02 | Sequence | 486 | 000146 (9) | ref|XP_002284112.1| | 6e-50 | PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Vitis vinifera] emb|CBI15127 | 758 | 000146 (9) | ref|XP_002284112.1| | 5e-36 | PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Vitis vinifera] emb|CBI15127 |
| JMFF026N10 | Sequence | 547 | 000146 (9) | ref|XP_002284112.1| | 1e-49 | PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Vitis vinifera] emb|CBI15127 | 758 | 000146 (9) | ref|XP_002317963.2| | 2e-16 | hypothetical protein POPTR_0012s06720g [Populus trichocarpa] gb|EEE96183.2| hypo |
| JMFF049D23 | Sequence | 630 | 000146 (9) | ref|XP_002284112.1| | 9e-50 | PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Vitis vinifera] emb|CBI15127 | 651 | 000146 (9) | |||
| JMFN038A01 | Sequence | 633 | 000146 (9) | ref|XP_002284112.1| | 2e-49 | PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Vitis vinifera] emb|CBI15127 | |||||
| JMSF045F02 | Sequence | 698 | 000146 (9) | ref|XP_002284112.1| | 4e-49 | PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Vitis vinifera] emb|CBI15127 | 775 | 000146 (9) | ref|XP_002284112.1| | 1e-43 | PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Vitis vinifera] emb|CBI15127 |
This contig is upended
. : . : . : . : . : . :
rJMFF026N10- CCATATAAGGAACTAACAA
____________________________________________________________
consensus CCATATAAGGAACTAACAA
. : . : . : . : . : . :
rJMFF026N10- CGCCCGTGATCTTTGGCAGAGAGAGAGATAGAGAGGAAGAAGAAAAAAAACAAAAATGCA
____________________________________________________________
consensus CGCCCGTGATCTTTGGCAGAGAGAGAGATAGAGAGGAAGAAGAAAAAAAACAAAAATGCA
. : . : . : . : . : . :
rJMFF049D23- TGTCCAAAGATATTCCTTAAAGGGTAAGTGCAGTGGCTATCACATGTACGTACTGC
rJMFF026N10- TGGCTGTCCAAAGATATTCCTTAAAGGGTAAGTGCAGTGGCTATCACATGTACGTACTGC
rJMFF004F02- GGGTAAGTGCAGTGGCTATCACATGTACGTACTGC
rJMSF045F02- TCACATGTACGTACTGC
____________________________________________________________
consensus TGGCTGTCCAAAGATATTCCTTAAAGGGTAAGTGCAGTGGCTATCACATGTACGTACTGC
. : . : . : . : . : . :
rJMFF049D23- CTGATTCCCCACCACTAGTGCACATAATAAAATTTTCAACATCAATAATTTTGAGATACC
rJMFF026N10- CTGATTCCCCACCACTAGTGCACATAATAAAATTTTCAACATCAATAATTTTGAGATACC
rJMFF004F02- CTGATTCCCCACCACTAGTGCACATAATAAAATTTTCAACATCAATAATTTTGAGATACC
rJMSF045F02- CTGATTCCCCACCACTAGTGCACATAATAAAATTTTCAACATCAATAATTTTGAGATACC
____________________________________________________________
consensus CTGATTCCCCACCACTAGTGCACATAATAAAATTTTCAACATCAATAATTTTGAGATACC
. : . : . : . : . : . :
rJMFF049D23- CATCCAATAATGTTGCCACCAGTTCATTCATCCAAAGCCCGCACTGGTTCAGTAGACAGT
rJMFF026N10- CATCCAATAATGTTGCCACCAGTTCATTCATCCAAAGCCCGCACTGGTTCAGTAGACAGT
rJMFF004F02- CATCCAATAATGTTGCCACCAGTTCATTCATCCAAAGCCCGCACTGGTTCAGTAGACAGT
rJMSF045F02- CATCCAATAATGTTGCCACCAGTTCATTCATCCAAAGCCCGCACTGGTTCAGTAGACAGT
JMSF045F02+ ACTGGTTCAGTAGACAGT
____________________________________________________________
consensus CATCCAATAATGTTGCCACCAGTTCATTCATCCAAAGCCCGCACTGGTTCAGTAGACAGT
. : . : . : . : . : . :
rJMFF049D23- ATTTAGAAAAAGAAGTTCGTTCATCTAAAGATCGATCTACTGGCCTTGTTGAAGCCACAA
rJMFF026N10- ATTTAGAAAAAGAAGTTCGTTCATCTAAAGATCGATCTACTGGCCTTGTTGAAGCCACAA
rJMFF004F02- ATTTAGAAAAAGAAGTTCGTTCATCTAAAGATCGATCTACTGGCCTTGTTGAAGCCACAA
rJMSF045F02- ATTTAGAAAAAGAAATTCGTTCATCTAAAGATCGATCTACTGGCCTTGTTGAAGCCACAA
JMSF045F02+ ATTTAGAAAAAGAAATTCGTTCATCTAAAGATCGATCTACTGGCCTTGTTGAAGCCACAA
JMFF049D23+ CAA
____________________________________________________________
consensus ATTTAGAAAAAGAAGTTCGTTCATCTAAAGATCGATCTACTGGCCTTGTTGAAGCCACAA
. : . : . : . : . : . :
rJMFF049D23- TAATGGTGCTAGTGCTGAGATTAGGAGGGTGATGGAGGGGAAAATGGCATTATTCCTTAT
rJMFF026N10- TAATGGTGCTAGTGCTGAGATTAGGAGGGTGATGGAGGGGAAAATGGCATTATTCCTTAT
rJMFF004F02- TAATGGTGCTAGTGCTGAGATTAGGAGGGTGATGGAGGGGAAAATGGCATTATTCCTTAT
rJMSF045F02- TAATGGTGCTAGTGCTGAGATTAGGAGGGTGATGGAGGGGAAAATGGCATTATTCCTTAT
JMSF045F02+ TAATGGTGCTAGTGCTGAGATTAGGAGGGTGATGGAGGGGAAAATGGCATTATTCCTTAT
JMFF049D23+ TAATGGTGCTAGTGCTGAGATTAGGAGGGTGATGGAGGGGAAAATGGCATTATTCCTTAT
____________________________________________________________
consensus TAATGGTGCTAGTGCTGAGATTAGGAGGGTGATGGAGGGGAAAATGGCATTATTCCTTAT
. : . : . : . : . : . :
rJMFF049D23- TAGCATTGAAATCCCAGCATGACTCATATCGTTGTAGGTGCCGACACCACCTGAACCCGA
rJMFF026N10- TAGCATTGAAATCCCAGCATGACTCATATCGTTGTAGGTGCCGACACCACCTGAACCCGA
rJMFF004F02- TAGCATTGAAATCCCAGCATGACTCATATCGTTGTAGGTGCCGACACCACCTGAACCCGA
rJMSF045F02- TAGCATTGAAATCCCAGCATGACTCATATCGTTGTAGGTGCCGACACCACCTGAACCCGA
JMSF045F02+ TAGCATTGAAATCCCAGCATGACTCATATCGTTGTAGGTGCCGACACCACCTGAACCCGA
JMFF049D23+ TAGCATTGAAATCCCAGCATGACTCATATCGTTGTAGGTGCCGACACCACCTGAACCCGA
JMFN038A01+ TGAAATCNCAGCATGACTCATATCGTTGTAGGTGCCGACACCACCTGAACCCGA
____________________________________________________________
consensus TAGCATTGAAATCCCAGCATGACTCATATCGTTGTAGGTGCCGACACCACCTGAACCCGA
. : . : . : . : . : . :
rJMFF049D23- TGGACCTAAACCACCATTGTTGAAGCCACCTCCTAAAGCACACGCTGCCGCCTGTAGTAG
rJMFF026N10- TGGACCTAAACCACCATTGTTGAAGCCACCTCCTAAAGCAC-CGCTGCCGCCTGTAGTAG
rJMFF004F02- TGGACCTAAACCACCATTGTTGAAGCCACCTCCTAAAGCAC-CGCTGCCGCCTGTAGTAG
rJMSF045F02- TGGACCTAAACCACCATTGTTGAAGCCACCTCCTAAAGCAC-CGCTGCCGCCTGTAGTAG
JMSF045F02+ TGGACCTAAACCACCATTGTTGAAGCCACCTCCTAAAGCAC-CGCTGCCGCCTGTAGTAG
JMFF004F02+ GAAGCCACCTCCTAAAGCAC-CGCTGCCGCCTGTAGTAG
JMFF049D23+ TGGACCTAAACCACCATTGTTGAAGCCACCTCCTAAAGCAC-CGCTGCCGCCTGTAGTAG
JMFN038A01+ TGGACCTAAACCACCATTGTTGAAGCCACCTCCTAAAGCAC-CGCTGCCGCCTGTAGTAG
____________________________________________________________
consensus TGGACCTAAACCACCATTGTTGAAGCCACCTCCTAAAGCAC-CGCTGCCGCCTGTAGTAG
. : . : . : . : . : . :
rJMFF049D23- TAGTAGTGGGAGTAGTAGTGATGATTGGATTTGGAGAAGAACCACTGCCTGTGCTTGTAG
rJMFF026N10- TAGTAGTGGGAGTAGTAGTGATGATTGGATTTGGAGAAGAACCACTGCCTGTGCTTGTAG
rJMFF004F02- TAGTAGTGGGAGTAGTAGTGATGATTGGATTTGGAGAAGAACCACTGCCTGTGCTTGTAG
rJMSF045F02- TAGTAGTGGGAGTAGTAGTGATGATTGGATTTGGAGAAGAACCACTGCCTGTGCTTGTAG
JMSF045F02+ TAGTAGTGGGAGTAGTAGTGATGATTGGATTTGGAGAAGAACCACTGCCTGTGCTTGTAG
JMFF004F02+ TAGTAGTGGGAGTAGTAGTGATGATTGGATTTGGAGAAGAACCACTGCCTGTGCTTGTAG
JMFF049D23+ TAGTAGTGGGAGTAGTAGTGATGATTGGATTTGGAGAAGAACCACTGCCTGTGCTTGTAG
JMFN038A01+ TAGTAGTGGGAGTAGTAGTGATGATTGGATTTGGAGAAGAACCACTGCCTGTGCTTGTAG
JMFF026N10+ CTTGTAG
____________________________________________________________
consensus TAGTAGTGGGAGTAGTAGTGATGATTGGATTTGGAGAAGAACCACTGCCTGTGCTTGTAG
. : . : . : . : . : . :
rJMFF049D23- ATGGAGTCCCAGTTGAAGGTGTGGTAGGGCTTGTGCTTCCACTTCCACTTGCACTGGAGG
rJMFF026N10- ATGGAGTCCCAGTTGAAGGTGTGGTAGGGCTTGTGCTTCCACTTCCACTTGCACTGGAGG
rJMFF004F02- ATGGAGTCCCAGTTGAAGGTGTGGTAGGGCTTGTGCTTCCACTTCCACTTGCACTGGAGG
rJMSF045F02- ATGGAGTCCCAGTTGAAGGTGTGGTAGGGCTTGTGCTTCCACTTCCACTTGCACTGGAGG
JMSF045F02+ ATGGAGTCCCAGTTGAAGGTGTGGTAGGGCTTGTGCTTCCACTTCCACTTGCACTGGAGG
JMFF004F02+ ATGGAGTCCCAGTTGAAGGTGTGGTAGGGCTTGTGCTTCCACTTCCACTTGCACTGGAGG
JMFF049D23+ ATGGAGTCCCAGTTGAAGGTGTGGTAGGGCTTGTGCTTCCACTTCCACTTGCACTGGAGG
JMFN038A01+ ATGGAGTCCCAGTTGAAGGTGTGGTAGGGCTTGTGCTTCCACTTCCACTTGCACTGGAGG
JMFF026N10+ ATGGAGTCCCAGTTGAAGGTGTGGTAGGGCTTGTGCTTCCACTTCCACTTGCACTGGAGG
____________________________________________________________
consensus ATGGAGTCCCAGTTGAAGGTGTGGTAGGGCTTGTGCTTCCACTTCCACTTGCACTGGAGG
. : . : . : . : . : . :
rJMFF049D23- GATAAGCACAACCATTTATACTGGGGTCAGTTGTGGTTATGGAGGCAGTGCTAGAGAAGT
rJMFF026N10- GATAAGCACAACCATTTATACTGGGGTCAGTTGTGGTTATGGAGGCAGTGCTAGAGAAGT
rJMFF004F02- GATAAGCACAACCATTTATACTGGGGTCAGTTGTGGTTATGGAGGCAGTGCTAGAGAAGT
rJMSF045F02- GATAAGCACAACCATTTATACTGGGGTCAGTTGTGGTTATGGAGGCAGTGCTAGAGAAGT
JMSF045F02+ GATAAGCACAACCATTTATACTGGGGTCAGTTGTGGTTATGGAGGCAGTGCTAGAGAAGT
JMFF004F02+ GATAAGCACAACCATTTATACTGGGGTCAGTTGTGGTTATGGAGGCAGTGCTAGAGAAGT
JMFF049D23+ GATAAGCACAACCATTTATACTGGGGTCAGTTGTGGTTATGGAGGCAGTGCTAGAGAAGT
JMFN038A01+ GATAAGCACAACCATTTATACTGGGGTCAGTTGTGGTTATGGAGGCAGTGCTAGAGAAGT
JMFF026N10+ GATAAGCACAACCATTTATACTGGGGTCAGTTGTGGTTATGGAGGCAGTGCTAGAGAAGT
____________________________________________________________
consensus GATAAGCACAACCATTTATACTGGGGTCAGTTGTGGTTATGGAGGCAGTGCTAGAGAAGT
. : . : . : . : . : . :
rJMFF049D23- CACAAGTGCCTGCAGC
rJMFF026N10- CACAAGTGCCTGCAGCTTGGCCCTTCTTCTGGAAAAAGCTATTGACAGCATAATTGCAAT
rJMFF004F02- CACAAGTGCCTGCAGCTTGGCCCTTCTTCTGGAAAAAGCTATTGACAGCATAATTGCAAT
rJMSF045F02- CACAAGTGCCTGCAGCTTGGCCCTTCTTCTGGAAAAAGCTATTGACAGCATAATTGCAAT
JMSF045F02+ CACAAGTGCCTGCAGCTTGGCCCTTCTTCTGGAAAAAGCTATTGACAGCATAATTGCAAT
JMFF004F02+ CACAAGTGCCTGCAGCTTGGCCCTTCTTCTGGAAAAAGCTATTGACAGCATAATTGCAAT
JMFF049D23+ CACAAGTGCCTGCAGCTTGGCCCTTCTTCTGGAAAAAGCTATTGACAGCATAATTGCAAT
JMFN038A01+ CACAAGTGCCTGCAGCTTGGCCCTTCTTCTGGAAAAAGCTATTGACAGCATAATTGCAAT
JMFF026N10+ CACAAGTGCCTGCAGCTTGGCCCTTCTTCTGGAAAAAGCTATTGACAGCATAATTGCAAT
____________________________________________________________
consensus CACAAGTGCCTGCAGCTTGGCCCTTCTTCTGGAAAAAGCTATTGACAGCATAATTGCAAT
. : . : . : . : . : . :
rJMFF026N10- GAGCTCTTACAGTGTTGGGG
rJMFF004F02- GAGCTCTTACAGTGTTGGGGTTATAACATGGCCCATTCTGATGAATGGGGTTGCAATCTG
rJMSF045F02- GAGCTCTTACAGTGTTGGGGTTATAACATGGCCCATTCTGATGAATGGGGTTGCAATCTG
JMSF045F02+ GAGCTCTTACAGTGTTGGGGTTATAACATGGCCCATTCTGATGAATGGGGTTGCAATCTG
JMFF004F02+ GAGCTCTTACAGTGTTGGGGTTATAACATGGCCCATTCTGATGAATGGGGTTGCAATCTG
JMFF049D23+ GAGCTCTTACAGTGTTGGGGTTATAACATGGCCCATTCTGATGAATGGGGTTGCAATCTG
JMFN038A01+ GAGCTCTTACAGTGTTGGGGTTATAACATGGCCCATTCTGATGAATGGGGTTGCAATCTG
JMFF026N10+ GAGCTCTTACAGTGTTGGGGTTATAACATGGCCCATTCTGATGAATGGGGTTGCAATCTG
____________________________________________________________
consensus GAGCTCTTACAGTGTTGGGGTTATAACATGGCCCATTCTGATGAATGGGGTTGCAATCTG
. : . : . : . : . : . :
rJMFF004F02- CCCCATTCCCACATGCATAGTCCAGTGTCGTTTGTAACTCACTATCACTCATCCCTCCCT
rJMSF045F02- CCCCATTCCCACATGCATAGTCCAGTGTCGTTTGTAACTCACTATCACTCATCCCTCCCT
JMSF045F02+ CCCCATTCCCACATGCATAGTCCAGTGTCGTTTGTAACTCACTATCACTCATCCCTCCCT
JMFF004F02+ CCCCATTCCCACATGCATAGTCCAGTGTCGTTTGTAACTCACTATCACTCATCCCTCCCT
JMFF049D23+ CCCCATTCCCACATGCATAGTCCAGTGTCGTTTGTAACTCACTATCACTCATCCCTCCCT
JMFN038A01+ CCCCATTCCCACATGCATAGTCCAGTGTCGTTTGTAACTCACTATCACTCATCCCTCCCT
JMFF026N10+ CCCCATTCCCACATGCATAGTCCAGTGTCGTTTGTAACTCACTATCACTCATCCCTCCCT
____________________________________________________________
consensus CCCCATTCCCACATGCATAGTCCAGTGTCGTTTGTAACTCACTATCACTCATCCCTCCCT
. : . : . : . : . : . :
rJMFF004F02- TGCA
rJMSF045F02- TGCAAATGCACCATGTTGCACTTGAGTGGCCAGCCATGG
JMSF045F02+ TGCAAATGCACCATGTTGCACTTGAGTGGCCAGCCATGGCCAAAAAGAGCAATGCAGACA
JMFF004F02+ TGCAAATGCACCATGTTGCACTTGAGTGGCCAGCCATGGCCAAAAAGAGCAATGCAGACA
JMFF049D23+ TGCAAATGCACCATGTTGCACTTGAGTGGCCAGCCATGGCCAAAAAGAGCAATGCAGACA
JMFN038A01+ TGCAAATGCACCATGTTGCACTTGAGTGGCCAGCCATGGCCAAAAAGAGCAATGCAGACA
JMFF026N10+ TGCAAATGCACCATGTTGCACTTGAGTGGCCAGCCATGGCCAAAAAGAGCAATGCAGACA
____________________________________________________________
consensus TGCAAATGCACCATGTTGCACTTGAGTGGCCAGCCATGGCCAAAAAGAGCAATGCAGACA
. : . : . : . : . : . :
JMSF045F02+ CTAAAGAAGCCATGGCAGAT
JMFF004F02+ CTAAAGAAGCCATGGCAGATGGAG
JMFF049D23+ CTAAAGAAGCCATGGCAGATGGAG
JMFN038A01+ CTAAAGAAGCCATGGCAGATGGAGAGATAACACAAGAAGAAGCCCTCTTAGAATATAATG
JMFF026N10+ CTAAAGAAGCCATGGCAGATGGAGAGATAACACAAGAAGAAGCCCTCTTAGAATATAATG
____________________________________________________________
consensus CTAAAGAAGCCATGGCAGATGGAGAGATAACACAAGAAGAAGCCCTCTTAGAATATAATG
. : . : . : . : . : . :
JMFN038A01+ ACGATAAACAAAGAA
JMFF026N10+ ACGATAAACAAAGAAGGCCTGGTAGCTTAGGAGAAGGTGGTGGGACTGGGAGAGAGTGAG
____________________________________________________________
consensus ACGATAAACAAAGAAGGCCTGGTAGCTTAGGAGAAGGTGGTGGGACTGGGAGAGAGTGAG
. : . : . : . : . : . :
JMFF026N10+ AAATAAAGGCGTGTTTGGGAAAGGAAAAATTACCAAACAGAAAAATACAAAGGCAGCAAT
____________________________________________________________
consensus AAATAAAGGCGTGTTTGGGAAAGGAAAAATTACCAAACAGAAAAATACAAAGGCAGCAAT