clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF031L03 | Sequence | 579 | 005250 (8) | ref|XP_009619128.1| | 213 | PREDICTED: uncharacterized protein LOC104111188 [Nicotiana tomentosiformis] | 225 | 005250 (8) | ref|XP_010278470.1| | 45.1 | PREDICTED: uncharacterized protein LOC104612652 [Nelumbo nucifera] ref|XP_010278 |
JMSF030G11 | Sequence | 659 | 005250 (8) | ref|XP_009619128.1| | 258 | PREDICTED: uncharacterized protein LOC104111188 [Nicotiana tomentosiformis] | 740 | 005250 (8) | ref|XP_009619128.1| | 291 | PREDICTED: uncharacterized protein LOC104111188 [Nicotiana tomentosiformis] |
JMSF034C06 | Sequence | 681 | 005250 (8) | ref|XP_009619128.1| | 290 | PREDICTED: uncharacterized protein LOC104111188 [Nicotiana tomentosiformis] | 729 | 005250 (8) | ref|XP_009619128.1| | 291 | PREDICTED: uncharacterized protein LOC104111188 [Nicotiana tomentosiformis] |
JMSF041F15 | Sequence | 834 | 005250 (8) | ref|XP_009619128.1| | 291 | PREDICTED: uncharacterized protein LOC104111188 [Nicotiana tomentosiformis] | 558 | 005250 (8) | gb|AFK41765.1| | 3e-64 | unknown [Lotus japonicus] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig005250============================================ 936 57 --------------------------------------------------------------------->JMSF030G11 <------------------------------------------------------------------------------rJMSF030G11 70 ------------------------------------------------------------->JMFF031L03 <-----------------------rJMFF031L03 125 ------------------------------------------------------------------------>JMSF034C06 <-----------------------------------------------------------------------------rJMSF034C06 153 ---------------------------------------------------------------------------------------->JMSF041F15 <----------------------------------------------------------rJMSF041F15
The following clones don't have the opposite end in this pair.