| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF031L03 | Sequence | 579 | 005250 (8) | ref|XP_009619128.1| | 213 | PREDICTED: uncharacterized protein LOC104111188 [Nicotiana tomentosiformis] | 225 | 005250 (8) | ref|XP_010278470.1| | 45.1 | PREDICTED: uncharacterized protein LOC104612652 [Nelumbo nucifera] ref|XP_010278 |
| JMSF030G11 | Sequence | 659 | 005250 (8) | ref|XP_009619128.1| | 258 | PREDICTED: uncharacterized protein LOC104111188 [Nicotiana tomentosiformis] | 740 | 005250 (8) | ref|XP_009619128.1| | 291 | PREDICTED: uncharacterized protein LOC104111188 [Nicotiana tomentosiformis] |
| JMSF034C06 | Sequence | 681 | 005250 (8) | ref|XP_009619128.1| | 290 | PREDICTED: uncharacterized protein LOC104111188 [Nicotiana tomentosiformis] | 729 | 005250 (8) | ref|XP_009619128.1| | 291 | PREDICTED: uncharacterized protein LOC104111188 [Nicotiana tomentosiformis] |
| JMSF041F15 | Sequence | 834 | 005250 (8) | ref|XP_009619128.1| | 291 | PREDICTED: uncharacterized protein LOC104111188 [Nicotiana tomentosiformis] | 558 | 005250 (8) | gb|AFK41765.1| | 3e-64 | unknown [Lotus japonicus] |
This contig is upended
. : . : . : . : . : . :
JMFF031L03- ACAAGTTAAAATAGAGAGAGAGAAGTCAATGGTCCG
JMSF030G11- TTAAAATAGAGAGAGAGAAGTCAATGGTCCG
____________________________________________________________
consensus ACAAGTTAAAATAGAGAGAGAGAAGTCAATGGTCCG
. : . : . : . : . : . :
JMFF031L03- GCCTTGCTTTATCTTCTTCCTCTCGTCGCAAGCAGATGTAAAGTGGCTGGCACGGCACGA
JMSF030G11- GCCTTGCTTTATCTTCTTCCTCTCGTCGCAAGCAGATGTAAAGTGGCTGGCACGGCACGA
JMSF034C06- GTAAAGTGGCTGGCACGGCACGA
____________________________________________________________
consensus GCCTTGCTTTATCTTCTTCCTCTCGTCGCAAGCAGATGTAAAGTGGCTGGCACGGCACGA
. : . : . : . : . : . :
JMFF031L03- CCAACCCATTAAAGAGTCCGCACAACCTTCATCATCTCCATCCCCTTCTTCATCTCTAAC
JMSF030G11- CCAACCCATTAAAGAGTCCGCACAACCTTCATCATCTCCATCCCCTTCTTCATCTCTAAC
JMSF034C06- CCAACCCATTAAAGAGTCCGCACAACCTTCATCATCTCCATCCCCTTCTTCATCTCTAAC
rJMSF034C06+ T
rJMSF030G11+ ATCTCTAAC
JMSF041F15- ATTAAAGAGTCCGCACAACCTTCATCATCTCCATCCCCTTCTTCATCTCTAAC
____________________________________________________________
consensus CCAACCCATTAAAGAGTCCGCACAACCTTCATCATCTCCATCCCCTTCTTCATCTCTAAC
. : . : . : . : . : . :
JMFF031L03- ---AGAAGTGTGCTCGTAACTTGAAGGCAAGATGGCAATGGGCATGAAGGAGATGTCTAT
JMSF030G11- ---AGAAGTGTGCTCGTAACTTGAAGGCAAGATGGCAATGGGCATGAAGGAGATGTCTAT
JMSF034C06- ---AGAAGTGTGCTCGTAACTTGAAGGCAAGATGGCAATGGGCATGAAGGAGATGTCTAT
rJMSF034C06+ AACAGAAGTGTGCTCGTAACTTGAAGGCAAGATGGCAATGGGCATGAAGGAGATGTCTAT
rJMSF030G11+ ---AGAAGTGTGCTCGTAACTTGAAGGCAAGATGGCAATGGGCATGAAGGAGATGTCTAT
JMSF041F15- AGTAGAAGTGTGCTCGTAACTTGAAGGCAAGATGGCAATGGGCATGAAGGAGATGTCTAT
____________________________________________________________
consensus ---AGAAGTGTGCTCGTAACTTGAAGGCAAGATGGCAATGGGCATGAAGGAGATGTCTAT
. : . : . : . : . : . :
JMFF031L03- CATAATAGCAACATTAGGTTTGGTATCCTTTATTTTTGGAGTTGTCGCCGAAAACAAAAA
JMSF030G11- CATAATAGCAACATTAGGTTTGGTATCCTTTATTTTTGGAGTTGTCGCCGAAAACAAAAA
JMSF034C06- CATAATAGCAACATTAGGTTTGGTATCCTTTATTTTTGGAGTTGTCGCCGAAAACAAAAA
rJMSF034C06+ CATAATAGCAACATTAGGTTTGGTATCCTTTATTTTTGGAGTTGTCGCCGAAAACAAAAA
rJMSF030G11+ CATAATAGCAACATTAGGTTTGGTATCCTTTATTTTTGGAGTTGTCGCCGAAAACAAAAA
JMSF041F15- CATAATAGCAACATTAGGTTTGGTATCCTTTATTTTTGGAGTTGTCGCCGAAAACAAAAA
____________________________________________________________
consensus CATAATAGCAACATTAGGTTTGGTATCCTTTATTTTTGGAGTTGTCGCCGAAAACAAAAA
. : . : . : . : . : . :
JMFF031L03- GCCTGCATATGGTACTGCAATCCCGGGGAAAGGCATAGTCATTTGCAAGTATCCGTCCGA
JMSF030G11- GCCTGCATATGGTACTGCAATCCCGGGGAAAGGCATAGTCATTTGCAAGTATCCGTCCGA
JMSF034C06- GCCTGCATATGGTACTGCAATCCCGGGGAAAGGCATAGTCATTTGCAAGTATCCGTCCGA
rJMSF034C06+ GCCTGCATATGGTACTGCAATCCCGGGGAAAGGCATAGTCATTTGCAAGTATCCGTCCGA
rJMSF030G11+ GCCTGCATATGGTACTGCAATCCCGGGGAAAGGCATAGTCATTTGCAAGTATCCGTCCGA
rJMSF041F15+ GA
JMSF041F15- GCCTGCATATGGTACTGCAATCCCGGGGAAAGGCATAGTCATTTGCAAGTATCCGTCCGA
____________________________________________________________
consensus GCCTGCATATGGTACTGCAATCCCGGGGAAAGGCATAGTCATTTGCAAGTATCCGTCCGA
. : . : . : . : . : . :
JMFF031L03- TCCAACTCCCGTTCTCGGATATTTGTCTGTCGCCTTTCTGTTGGCCTCCACTGCAGTTGG
JMSF030G11- TCCAACTCCCGTTCTCGGATATTTGTCTGTCGCCTTTCTGTTGGCCTCCACTGCAGTTGG
JMSF034C06- TCCAACTCCCGTTCTCGGATATTTGTCTGTCGCCTTTCTGTTGGCCTCCACTGCAGTTGG
rJMSF034C06+ TCCAACTCCCGTTCTCGGATATTTGTCTGTCGCCTTTCTGTTGGCCTCCACTGCAGTTGG
rJMSF030G11+ TCCAACTCCCGTTCTCGGATATTTGTCTGTCGCCTTTCTGTTGGCCTCCACTGCAGTTGG
rJMSF041F15+ TCCAACTCCCGTTCTCGGATATTTGTCTGTCGCCTTTCTGTTGGCCTCCACTGCAGTTGG
JMSF041F15- TCCAACTCCCGTTCTCGGATATTTGTCTGTCGCCTTTCTGTTGGCCTCCACTGCAGTTGG
____________________________________________________________
consensus TCCAACTCCCGTTCTCGGATATTTGTCTGTCGCCTTTCTGTTGGCCTCCACTGCAGTTGG
. : . : . : . : . : . :
JMFF031L03- ATACTTTTCGCTATTCTATCCATACAAGGGGAAGTCTATTCCACAGTCTGCGTTCTTCAA
JMSF030G11- ATACTTTTCGCTATTCTATCCATACAAGGGGAAGTCTATTCCACAGTCTGCGTTCTTCAA
JMSF034C06- ATACTTTTCGCTATTCTATCCATACAAGGGGAAGTCTATTCCACAGTCTGCGTTCTTCAA
rJMSF034C06+ ATACTTTTCGCTATTCTATCCATACAAGGGGAAGTCTATTCCACAGTCTGCGTTCTTCAA
rJMSF030G11+ ATACTTTTCGCTATTCTATCCATACAAGGGGAAGTCTATTCCACAGTCTGCGTTCTTCAA
rJMSF041F15+ ATACTTTTCGCTATTCTATCCATACAAGGGGAAGTCTATTCCACAGTCTGCGTTCTTCAA
JMSF041F15- ATACTTTTCGCTATTCTATCCATACAAGGGGAAGTCTATTCCACAGTCTGCGTTCTTCAA
____________________________________________________________
consensus ATACTTTTCGCTATTCTATCCATACAAGGGGAAGTCTATTCCACAGTCTGCGTTCTTCAA
. : . : . : . : . : . :
JMFF031L03- AAACACCAGTTTCCTCGTGTTCTTCAATATTGCTATAGGGACGACTGGATTAGCTGCAGC
JMSF030G11- AAACACCAGTTTCCTCGTGTTCTTCAATATTGCTATAGGGACGACTGGATTAGCTGCAGC
JMSF034C06- AAACACCAGTTTCCTCGTGTTCTTCAATATTGCTATAGGGACGACTGGATTAGCTGCAGC
rJMSF034C06+ AAACACCAGTTTCCTCGTGTTCTTCAATATTGCTATAGGGACGACTGGATTAGCTGCAGC
rJMSF030G11+ AAACACCAGTTTCCTCGTGTTCTTCAATATTGCTATAGGGACGACTGGATTAGCTGCAGC
rJMSF041F15+ AAACACCAGTTTCCTCGTGTTCTTCAATATTGCTATAGGGACGACTGGATTAGCTGCAGC
JMSF041F15- AAACACCAGTTTCCTCGTGTTCTTCAATATTGCTATAGGGACGACTGGATTAGCTGCAGC
____________________________________________________________
consensus AAACACCAGTTTCCTCGTGTTCTTCAATATTGCTATAGGGACGACTGGATTAGCTGCAGC
. : . : . : . : . : . :
JMFF031L03- GTTTCTGTTATGGCCAACAATCACCGAGCAACTTCACATTACGAACAACGTTCATCAAGA
JMSF030G11- GTTTCTGTTATGGCCAACAATCACCGAGCAACTTCACATTACGAACAACGTTCATCAAGA
JMSF034C06- GTTTCTGTTATGGCCAACAATCACCGAGCAACTTCACATTACGAACAACGTTCATCAAGA
rJMSF034C06+ GTTTCTGTTATGGCCAACAATCACCGAGCAACTTCACATTACGAACAACGTTCATCAAGA
rJMSF030G11+ GTTTCTGTTATGGCCAACAATCACCGAGCAACTTCACATTACGAACAACGTTCATCAAGA
rJMSF041F15+ GTTTCTGTTATGGCCAACAATCACCGAGCAACTTCACATTACGAACAACGTTCATCAAGA
JMSF041F15- GTTTCTGTTATGGCCAACAATCACCGAGCAACTTCACATTACGAACAACGTTCATCAAGA
____________________________________________________________
consensus GTTTCTGTTATGGCCAACAATCACCGAGCAACTTCACATTACGAACAACGTTCATCAAGA
. : . : . : . : . : . :
JMFF031L03- CTTGCA
JMSF030G11- CTTGCAAACAGGCGGGTGCCCCACGGCTAAGACGGGCCTTCTTGGTGGTGGTGCGTTTTT
JMSF034C06- CTTGCAAACAGGCGGGTGCCCCACGGCTAAGACGGGCCTTCTTGGTGGTGGTGCGTTTTT
rJMSF034C06+ CTTGCAAACAGGCGGGTGCCCCACGGCTAAGACGGGCCTTCTTGGTGGTGGTGCGTTTTT
rJMSF030G11+ CTTGCAAACAGGCGGGTGCCCCACGGCTAAGACGGGCCTTCTTGGTGGTGGTGCGTTTTT
rJMSF041F15+ CTTGCAAACAGGCGGGTGCCCCACGGCTAAGACGGGCCTTCTTGGTGGTGGTGCGTTTTT
JMSF041F15- CTTGCAAACAGGCGGGTGCCCCACGGCTAAGACGGGCCTTCTTGGTGGTGGTGCGTTTTT
____________________________________________________________
consensus CTTGCAAACAGGCGGGTGCCCCACGGCTAAGACGGGCCTTCTTGGTGGTGGTGCGTTTTT
. : . : . : . : . : . :
JMSF030G11- GTCTCTCGACTCGTCCCTCTTCTGGTT
JMSF034C06- GTCTCTCGACTCGTCCCTCTTCTGGTTGGTCTTGATGATGCTAGCGCACAATGCTCGGGA
rJMSF034C06+ GTCTCTCGACTCGTCCCTCTTCTGGTTGGTCTTGATGATGCTAGCGCACAATGCTCGGGA
rJMSF030G11+ GTCTCTCGACTCGTCCCTCTTCTGGTTGGTCTTGATGATGCTAGCGCACAATGCTCGGGA
rJMFF031L03+ CGACTCGTCCCTCTTCTGGTTGGTCTTGATGATGCTAGCGCACAATGCTCGGGA
rJMSF041F15+ GTCTCTCGACTCGTCCCTCTTCTGGTTGGTCTTGATGATGCTAGCGCACAATGCTCGGGA
JMSF041F15- GTCTCTCGACTCGTCCCTCTTCTGGTTGGTCTTGATGATGCTAGCGCACAATGCTCGGGA
____________________________________________________________
consensus GTCTCTCGACTCGTCCCTCTTCTGGTTGGTCTTGATGATGCTAGCGCACAATGCTCGGGA
. : . : . : . : . : . :
JMSF034C06- AGACTACCTGGAGGACGAGGGCATCAAAGGTGGGGAAGGGTACGCGGTTTCTGCCGATTA
rJMSF034C06+ AGACTACCTGGAGGACGAGGGCATCAAAGGTGGGGAAGGGTACGCGGTTTCTGCCGATTA
rJMSF030G11+ AGACTACCTGGAGGACGAGGGCATCAAAGGTGGGGAAGGGTACGCGGTTTCTGCCGATTA
rJMFF031L03+ AGACTNCCTGGAGGACGAGGGCATCAAAGGTGGGGAAGGGTACGCGGTTTCTGCCGATTA
rJMSF041F15+ AGACTACCTGGAGGACGAGGGCATCAAAGGTGGGGAAGGGTACGCGGTTTCTGCCGATTA
JMSF041F15- AGACTACCTGGAGGACGAGGGCATCAAAGGTGGGGAAGGGTACGCGGTTTCTGCCGATTA
____________________________________________________________
consensus AGACTACCTGGAGGACGAGGGCATCAAAGGTGGGGAAGGGTACGCGGTTTCTGCCGATTA
. : . : . : . : . : . :
rJMSF034C06+ TGAGGCAGATGTGCCAATTTCATCAAAGGCTTCTCACTGAACTTTGCTATTAATCTGTAA
rJMSF030G11+ TGAGGCAGATGTGCCAATTTCATCAAAGGCTTCTCACTGAACTTTGCTATTAATCTGTAA
rJMFF031L03+ TGAGGCAGATGTGCCAATTTCATCAAAGGCTTCTCACTGAACTTTGCTATTAATCTGTAA
rJMSF041F15+ TGAGGCAGATGTGCCAATTTCATCAAAGGCTTCTCACTGAACTTTGCTATTAATCTGTAA
JMSF041F15- TGAGGCAGATGTGCCAATTTCATCAAAGGCTTCTCACTGAACTTTGCTATTAATCTGTAA
____________________________________________________________
consensus TGAGGCAGATGTGCCAATTTCATCAAAGGCTTCTCACTGAACTTTGCTATTAATCTGTAA
. : . : . : . : . : . :
rJMSF034C06+ ATATTATTGCTATTAATAGAAAGGCAATATGTATTATGAACTTATTGTTCTTTGATGTTG
rJMSF030G11+ ATATTATTGCTATTAATAGAAAGGCAATATGTATTATGAACTTATTGTTCTTTGATGTTG
rJMFF031L03+ ATATTATTGCTATTAATAGAAAGGCAATATGTATTATGAACTTATTGTTCT
rJMSF041F15+ ATATTATTGCTATTAATAGAAAGGCAATATGTATTATGAACTTATTGTTCTTTGATGTTG
JMSF041F15- ATATTATTGCTATTAATAGAAAGGCAATATGTATTATGAACTTATTGTTCTTTGATGTTG
____________________________________________________________
consensus ATATTATTGCTATTAATAGAAAGGCAATATGTATTATGAACTTATTGTTCTTTGATGTTG
. : . : . : . : . : . :
rJMSF034C06+ TGCTGCAT
rJMSF030G11+ TGCTGCAT
rJMSF041F15+ TGCTGCATTG
JMSF041F15- TGCTGCATTGTACCATACTATTGCAAATAAGAATGTTGGCCCTGTTTGGTAAAAAAAAAA
____________________________________________________________
consensus TGCTGCATTGTACCATACTATTGCAAATAAGAATGTTGGCCCTGTTTGGTAAAAAAAAAA