clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF012F17 | Sequence | 546 | 003917 (10) | ref|XP_009618462.1| | 113 | PREDICTED: uncharacterized protein LOC104110640 [Nicotiana tomentosiformis] | 665 | 003917 (10) | ref|XP_009618462.1| | 113 | PREDICTED: uncharacterized protein LOC104110640 [Nicotiana tomentosiformis] |
JMFF048A04 | Sequence | 453 | 003917 (10) | ref|XP_009757265.1| | 165 | PREDICTED: uncharacterized protein LOC104210145 [Nicotiana sylvestris] | 197 | 003917 (10) | |||
JMSF037D19 | Sequence | 693 | 003917 (10) | ref|XP_009618462.1| | 214 | PREDICTED: uncharacterized protein LOC104110640 [Nicotiana tomentosiformis] | 666 | 003917 (10) | ref|XP_009618462.1| | 214 | PREDICTED: uncharacterized protein LOC104110640 [Nicotiana tomentosiformis] |
JMSF037M14 | Sequence | 692 | 003917 (10) | ref|XP_009618462.1| | 214 | PREDICTED: uncharacterized protein LOC104110640 [Nicotiana tomentosiformis] | |||||
JMSF051P04 | Sequence | 676 | 003917 (10) | ref|XP_009618462.1| | 214 | PREDICTED: uncharacterized protein LOC104110640 [Nicotiana tomentosiformis] | |||||
JMSF052J01 | Sequence | 687 | 003917 (10) | ref|XP_009618462.1| | 214 | PREDICTED: uncharacterized protein LOC104110640 [Nicotiana tomentosiformis] | 664 | 003917 (10) | ref|XP_009618462.1| | 214 | PREDICTED: uncharacterized protein LOC104110640 [Nicotiana tomentosiformis] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig003917============================================ 714 9 -------------------------------------------------------------->JMFF048A04 <---------------------------rJMFF048A04 33 ---------------------------------------------------------------------------->JMFF012F17 <--------------------------------------------------------------------------------------------rJMFF012F17 50 --------------------------------------------------------------------------------------------->JMSF037D19 <--------------------------------------------------------------------------------------------rJMSF037D19 50 --------------------------------------------------------------------------------------------->JMSF052J01 <--------------------------------------------------------------------------------------------rJMSF052J01
The following clones don't have the opposite end in this pair.
---------------------------------------------------------------------------------------------->JMSF051P04- --------------------------------------------------------------------------------------------->JMSF037M14-