| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012F17 | Sequence | 546 | 003917 (10) | ref|XP_009618462.1| | 113 | PREDICTED: uncharacterized protein LOC104110640 [Nicotiana tomentosiformis] | 665 | 003917 (10) | ref|XP_009618462.1| | 113 | PREDICTED: uncharacterized protein LOC104110640 [Nicotiana tomentosiformis] |
| JMFF048A04 | Sequence | 453 | 003917 (10) | ref|XP_009757265.1| | 165 | PREDICTED: uncharacterized protein LOC104210145 [Nicotiana sylvestris] | 197 | 003917 (10) | |||
| JMSF037D19 | Sequence | 693 | 003917 (10) | ref|XP_009618462.1| | 214 | PREDICTED: uncharacterized protein LOC104110640 [Nicotiana tomentosiformis] | 666 | 003917 (10) | ref|XP_009618462.1| | 214 | PREDICTED: uncharacterized protein LOC104110640 [Nicotiana tomentosiformis] |
| JMSF037M14 | Sequence | 692 | 003917 (10) | ref|XP_009618462.1| | 214 | PREDICTED: uncharacterized protein LOC104110640 [Nicotiana tomentosiformis] | |||||
| JMSF051P04 | Sequence | 676 | 003917 (10) | ref|XP_009618462.1| | 214 | PREDICTED: uncharacterized protein LOC104110640 [Nicotiana tomentosiformis] | |||||
| JMSF052J01 | Sequence | 687 | 003917 (10) | ref|XP_009618462.1| | 214 | PREDICTED: uncharacterized protein LOC104110640 [Nicotiana tomentosiformis] | 664 | 003917 (10) | ref|XP_009618462.1| | 214 | PREDICTED: uncharacterized protein LOC104110640 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMFF048A04- GTATTGCATTTGCATTTCAGTATATGTTTGTGGAAATATAGGTAAATGAGAGGA
rJMFF012F17- ATGTTTGTGGAAATATAGGTAAATGAGAGGA
JMSF037M14+ AATATAGGTAAATGAGAGGA
JMSF052J01+ AATATAGGTAAATGAGAGGA
JMSF037D19+ AATATAGGTAAATGAGAGGA
rJMSF052J01- TAAATGAGAGGA
rJMSF037D19- TAAATGAGAGGA
JMSF051P04+ ATAGGTAAATGAGAGGA
____________________________________________________________
consensus GTATTGCATTTGCATTTCAGTATATGTTTGTGGAAATATAGGTAAATGAGAGGA
. : . : . : . : . : . :
rJMFF048A04- CAGAAGATTGTAGCATCATCATATACATGTTTCTGGAAATTAAAATTACAATATAATGTC
rJMFF012F17- CAGAAGATTGTAGCATCATCATATACATGTTTCTGGAAATTAAAATTACAATATAATGTC
JMSF037M14+ CAGAAGATTGTAGCATCATCATATACATGTTTCTGGAAATTAAAATTACAATATAATGTC
JMSF052J01+ CAGAAGATTGTAGCATCATCATATACATGTTTCTGGAAATTAAAATTACAATATAATGTC
JMSF037D19+ CAGAAGATTGTAGCATCATCATATACATGTTTCTGGAAATTAAAATTACAATATAATGTC
rJMSF052J01- CAGAAGATTGTAGCATCATCATATACATGTTTCTGGAAATTAAAATTACAATATAATGTC
rJMSF037D19- CAGAAGATTGTAGCATCATCATATACATGTTTCTGGAAATTAAAATTACAATATAATGTC
JMSF051P04+ CAGAAGATTGTAGCATCATCATATACATGTTTCTGGAAATTAAAATTACAATATAATGTC
____________________________________________________________
consensus CAGAAGATTGTAGCATCATCATATACATGTTTCTGGAAATTAAAATTACAATATAATGTC
. : . : . : . : . : . :
rJMFF048A04- AAACAAATGATCATTTGACAAGCTCTTCTTCCTTAGCCTCTTCTAGCTCTCGTAGCCCTT
rJMFF012F17- AAACAAATGATCATTTGACAAGCTCTTCTTCCTTAGCCTCTTCTAGCTCTCGTAGCCCTT
JMSF037M14+ AAACAAATGATCATTTGACAAGCTCTTCTTCCTTAGCCTCTTCTAGCTCTCGTAGCCCTT
JMSF052J01+ AAACAAATGATCATTTGACAAGCTCTTCTTCCTTAGCCTCTTCTAGCTCTCGTAGCCCTT
JMFF012F17+ CTAGCTCTCGTAGCCCTT
JMSF037D19+ AAACAAATGATCATTTGACAAGCTCTTCTTCCTTAGCCTCTTCTAGCTCTCGTAGCCCTT
rJMSF052J01- AAACAAATGATCATTTGACAAGCTCTTCTTCCTTAGCCTCTTCTAGCTCTCGTAGCCCTT
rJMSF037D19- AAACAAATGATCATTTGACAAGCTCTTCTTCCTTAGCCTCTTCTAGCTCTCGTAGCCCTT
JMSF051P04+ AAACAAATGATCATTTGACAAGCTCTTCTTCCTTAGCCTCTTCTAGCTCTCGTAGCCCTT
____________________________________________________________
consensus AAACAAATGATCATTTGACAAGCTCTTCTTCCTTAGCCTCTTCTAGCTCTCGTAGCCCTT
. : . : . : . : . : . :
rJMFF048A04- CAACCTTCTGCTCTATCTCCTCT
rJMFF012F17- CAACCTTCTGCTCTATCTCCTCTATCAGCTCCTCACGCCATAGCTCCGCCCGAGATCTTT
JMSF037M14+ CAACCTTCTGCTCTATCTCCTCTATCAGCTCCTCACGCCATAGCTCCGCCCGAGATCTTT
JMSF052J01+ CAACCTTCTGCTCTATCTCCTCTATCAGCTCCTCACGCCATAGCTCCGCCCGAGATCTTT
JMFF012F17+ CAACCTTCTGCTCTATCTCCTCTATCAGCTCCTCACGCCATAGCTCCGCCCGAGATCTTT
JMSF037D19+ CAACCTTCTGCTCTATCTCCTCTATCAGCTCCTCACGCCATAGCTCCGCCCGAGATCTTT
rJMSF052J01- CAACCTTCTGCTCTATCTCCTCTATCAGCTCCTCACGCCATAGCTCCGCCCGAGATCTTT
rJMSF037D19- CAACCTTCTGCTCTATCTCCTCTATCAGCTCCTCACGCCATAGCTCCGCCCGAGATCTTT
JMSF051P04+ CAACCTTCTGCTCTATCTCCTCTATCAGCTCCTCACGCCATAGCTCCGCCCGAGATCTTT
____________________________________________________________
consensus CAACCTTCTGCTCTATCTCCTCTATCAGCTCCTCACGCCATAGCTCCGCCCGAGATCTTT
. : . : . : . : . : . :
rJMFF012F17- CTTCAATGTCTTCTTGCTTATCATAGATCCAATGTCCAGTACCATCCCCACCATCTCCTC
JMSF037M14+ CTTCAATGTCTTCTTGCTTATCATAGATCCAATGTCCAGTACCATCCCCACCATCTCCTC
JMSF052J01+ CTTCAATGTCTTCTTGCTTATCATAGATCCAATGTCCAGTACCATCCCCACCATCTCCTC
JMFF012F17+ CTTCAATGTCTTCTTGCTTATCATAGATCCAATGTCCAGTACCATCCCCACCATCTCCTC
JMSF037D19+ CTTCAATGTCTTCTTGCTTATCATAGATCCAATGTCCAGTACCATCCCCACCATCTCCTC
rJMSF052J01- CTTCAATGTCTTCTTGCTTATCATAGATCCAATGTCCAGTACCATCCCCACCATCTCCTC
JMFF048A04+ ATCATAGATCCAATGTCCAGTACCATCCCCACCATCTCCTC
rJMSF037D19- CTTCAATGTCTTCTTGCTTATCATAGATCCAATGTCCAGTACCATCCCCACCATCTCCTC
JMSF051P04+ CTTCAATGTCTTCTTGCTTATCATAGATCCAATGTCCAGTACCATCCCCACCATCTCCTC
____________________________________________________________
consensus CTTCAATGTCTTCTTGCTTATCATAGATCCAATGTCCAGTACCATCCCCACCATCTCCTC
. : . : . : . : . : . :
rJMFF012F17- TATACTGCTCTGAATCATAGTAGGGATCTTTAGTAGAACCAAAGAAGCAGCATCCCCAAA
JMSF037M14+ TATACTGCTCTGAATCATAGTAGGGATCTTTAGTAGAACCAAAGAAGCAGCATCCCCAAA
JMSF052J01+ TATACTGCTCTGAATCATAGTAGGGATCTTTAGTAGAACCAAAGAAGCAGCATCCCCAAA
JMFF012F17+ TATACTGCTCTGAATCATAGTAGGGATCTTTAGTAGAACCAAAGAAGCAGCATCCCCAAA
JMSF037D19+ TATACTGCTCTGAATCATAGTAGGGATCTTTAGTAGAACCAAAGAAGCAGCATCCCCAAA
rJMSF052J01- TATACTGCTCTGAATCATAGTAGGGATCTTTAGTAGAACCAAAGAAGCAGCATCCCCAAA
JMFF048A04+ TATACTGCTCTGAATCATAGTAGGGATCTTTAGTAGAACCAAAGAAGCAGCATCCCCAAA
rJMSF037D19- TATACTGCTCTGAATCATAGTAGGGATCTTTAGTAGAACCAAAGAAGCAGCATCCCCAAA
JMSF051P04+ TATACTGCTCTGAATCATAGTAGGGATCTTTAGTAGAACCAAAGAAGCAGCATCCCCAAA
____________________________________________________________
consensus TATACTGCTCTGAATCATAGTAGGGATCTTTAGTAGAACCAAAGAAGCAGCATCCCCAAA
. : . : . : . : . : . :
rJMFF012F17- TAGTGAA-ATGATGTAAAATGAGTAAACATTTTTTATGGCTGCATCACTTAGATGCCAAA
JMSF037M14+ TAGTGAACATGATGTAAAATGAGTAAACATTTTTTATGGCTGCATCACTTAGATGCCAAA
JMSF052J01+ TAGTGAACATGATGTAAAATGAGTAAACATTTTTTATGGCTGCATCACTTAGATGCCAAA
JMFF012F17+ TAGTGAA-ATGATGTAAAATGAGTAAACATTTTTTATGGCTGCATCACTTAGATGCCAAA
JMSF037D19+ TAGTGAACATGATGTAAAATGAGTAAACATTTTTTATGGCTGCATCACTTAGATGCCAAA
rJMSF052J01- TAGTGAACATGATGTAAAATGAGTAAACATTTTTTATGGCTGCATCACTTAGATGCCAAA
JMFF048A04+ TAGTGAACATGATGTAAAATGAGTAAACATTTTTTATGGCTGCATCACTTAGATGCCAAA
rJMSF037D19- TAGTGAACATGATGTAAAATGAGTAAACATTTTTTATGGCTGCATCACTTAGATGCCAAA
JMSF051P04+ TAGTGAACATGATGTAAAATGAGTAAACATTTTTTATGGCTGCATCACTTAGATGCCAAA
____________________________________________________________
consensus TAGTGAACATGATGTAAAATGAGTAAACATTTTTTATGGCTGCATCACTTAGATGCCAAA
. : . : . : . : . : . :
rJMFF012F17- CAGACTTGTGAGTGACGAGGTCCCTTTGGCCATCCAAGTGTTCAACCATTACTGCCATCA
JMSF037M14+ CAGACTTGTGAGTGACGAGGTCCCTTTGGCCATCCAAGTGTTCAACCATTACTGCCATCA
JMSF052J01+ CAGACTTGTGAGTGACGAGGTCCCTTTGGCCATCCAAGTGTTCAACCATTACTGCCATCA
JMFF012F17+ CAGACTTGTGAGTGACGAGGTCCCTTTGGCCATCCAAGTGTTCAACCATTACTGCCATCA
JMSF037D19+ CAGACTTGTGAGTGACGAGGTCCCTTTGGCCATCCAAGTGTTCAACCATTACTGCCATCA
rJMSF052J01- CAGACTTGTGAGTGACGAGGTCCCTTTGGCCATCCAAGTGTTCAACCATTACTGCCATCA
JMFF048A04+ CAGACTTGTGAGTGACGAGGTCCCTTTGGCCATCCAAGTGTTCAACCATTACTGCCATCA
rJMSF037D19- CAGACTTGTGAGTGACGAGGTCCCTTTGGCCATCCAAGTGTTCAACCATTACTGCCATCA
JMSF051P04+ CAGACTTGTGAGTGACGAGGTCCCTTTGGCCATCCAAGTGTTCAACCATTACTGCCATCA
____________________________________________________________
consensus CAGACTTGTGAGTGACGAGGTCCCTTTGGCCATCCAAGTGTTCAACCATTACTGCCATCA
. : . : . : . : . : . :
rJMFF012F17- ATTGCAAACCTGGGAATGCATTCACTCTTGTTCTACAAC-CCCTTCTGCTCTTCCCCCCA
JMSF037M14+ ATTGCAAACCTGGGAATGCATTCACTCTTGTTCTACAAC-CCCTTCTGCTCTTCCCCCCA
JMSF052J01+ ATTGCAAACCTGGGAATGCATTCACTCTTGTTCTACAAC-CCCTTCTGCTCTTCCCCCCA
JMFF012F17+ ATTGCAAACCTGGGAATGCATTCACTCTTGTTCTACAAC-CCCTTCTGCTCTTCCCCCCA
JMSF037D19+ ATTGCAAACCTGGGAATGCATTCACTCTTGTTCTACAAC-CCCTTCTGCTCTTCCCCCCA
rJMSF052J01- ATTGCAAACCTGGGAATGCATTCACTCTTGTTCTACAAC-CCCTTCTGCTCTTCCCCCCA
JMFF048A04+ ATTGCAAACCTGGGAATGCATTCACTCTTGTTCTACAACTCCCTTCTGCTCTTCCCCCCC
rJMSF037D19- ATTGCAAACCTGGGAATGCATTCACTCTTGTTCTACAAC-CCCTTCTGCTCTTCCCCCCA
JMSF051P04+ ATTGCAAACCTGGGAATGCATTCACTCTTGTTCTACAAC-CCCTTCTGCTCTTCCCCCCA
____________________________________________________________
consensus ATTGCAAACCTGGGAATGCATTCACTCTTGTTCTACAAC-CCCTTCTGCTCTTCCCCCCA
. : . : . : . : . : . :
rJMFF012F17- CCTTCAATCTGGTAACTACTGCAAGGGCTAAAGGCAGAATTTAAGCATTGCCCGAGTGGT
JMSF037M14+ CCTTCAATCTGGTAACTACTGCAAGGGCTAAAGGCAGAATTTAAGCATTGCCCGAGTGGT
JMSF052J01+ CCTTCAATCTGGTAACTACTGCAAGGGCTAAAGGCAGAATTTAAGCATTGCCCGAGTGGT
JMFF012F17+ CCTTCAATCTGGTAACTACTGCAAGGGCTAAAGGCAGAATTTAAGCATTGCCCGAGTGGT
JMSF037D19+ CCTTCAATCTGGTAACTACTGCAAGGGCTAAAGGCAGAATTTAAGCATTGCCCGAGTGGT
rJMSF052J01- CCTTCAATCTGGTAACTACTGCAAGGGCTAAAGGCAGAATTTAAGCATTGCCCGAGTGGT
JMFF048A04+ CCTTCTATCTGGTAACTACTGCAAGGGCTAAAGGCAGAATTTAAGCATTGCCCGAGTGGT
rJMSF037D19- CCTTCAATCTGGTAACTACTGCAAGGGCTAAAGGCAGAATTTAAGCATTGCCCGAGTGGT
JMSF051P04+ CCTTCAATCTGGTAACTACTGCAAGGGCTAAAGGCAGAATTTAAGCATTGCCCGAGTGGT
____________________________________________________________
consensus CCTTCAATCTGGTAACTACTGCAAGGGCTAAAGGCAGAATTTAAGCATTGCCCGAGTGGT
. : . : . : . : . : . :
rJMFF012F17- TTAGGAAGTTTTGATGGACAATGAAGAGAGGGGTTATGAATTCTTGGTTTGATAATCGTG
JMSF037M14+ TTAGGAAGTTTTGATGGACAATGAAGAGAGGGGTTATGAATTCTTGGTTTGATAATCGTG
JMSF052J01+ TTAGGAAGTTTTGATGGACAATGAAGAGAGGGGTTATGAATTCTTGGTTTGATAATCGTG
JMFF012F17+ TTAGGAAGTTTTGATGGACAATGAAGAGAGGGGTTATGAATTCTTGGTTTGATAATCGTG
JMSF037D19+ TTAGGAAGTTTTGATGGACAATGAAGAGAGGGGTTATGAATTCTTGGTTTGATAATCGTG
rJMSF052J01- TTAGGAAGTTTTGATGGACAATGAAGAGAGGGGTTATGAATTCTTGGTTTGATAATCGTG
JMFF048A04+ TTAGGAAGTTTTGATGGACAATGAAGAGAGGGGTTATGAATTCTTGGTTTGATAATCGTG
rJMSF037D19- TTAGGAAGTTTTGATGGACAATGAAGAGAGGGGTTATGAATTCTTGGTTTGATAATCGTG
JMSF051P04+ TTAGGAAGTTTTGATGGACAATGAAGAGAGGGGTTATGAATTCTTGGTTTGATAATCGTG
____________________________________________________________
consensus TTAGGAAGTTTTGATGGACAATGAAGAGAGGGGTTATGAATTCTTGGTTTGATAATCGTG
. : . : . : . : . : . :
rJMFF012F17- AAGCTCATCACAGCTTCAGCCATTTTTCCGTGCTGT
JMSF037M14+ AAGCTCATCACAGCTTCAGCCATTTTTCCGTGCTGTGAAAGGATTGGTC
JMSF052J01+ AAGCTCATCACAGCTTCAGCCATTTTTCCGTGCTGTGAAAGGATTGGTCTGT
JMFF012F17+ AAGCTCATCACAGCTTCAGCCATTTTTCCGTGCTGTGAAAGGATTGGTCT
JMSF037D19+ AAGCTCATCACAGCTTCAGCCATTTTTCCGTGCTGTGAAAGGATTGGTCTGT
rJMSF052J01- AAGCTCATCACAGCTTCAGCCATTTTTCCGTGCTGTGAAAGGATTGGTCTGT
JMFF048A04+ AAGCTCATCACAGCTTCAGCCATTTTTCCGTGCTGTGAAAGGATTGGTCTGT
rJMSF037D19- AAGCTCATCACAGCTTCAGCCATTTTTCCGTGCTGTGAAAGGATTGGTCTGT
JMSF051P04+ AAGCTCATCACAGCTTCAGCCATTTTTCCGTGCTGTGAAAGGATTGGTCTGTAGAAAGTC
____________________________________________________________
consensus AAGCTCATCACAGCTTCAGCCATTTTTCCGTGCTGTGAAAGGATTGGTCTGTAGAAAGTC