List of clones in pair P017416.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007A23Sequence611002379 (13)ref|XP_009611798.1|2e-71PREDICTED: 40S ribosomal protein S15 [Nicotiana tomentosiformis]
JMFF014L16Sequence530002379 (13)gb|ADR71251.1|1e-7140S ribosomal protein S15D [Hevea brasiliensis]666002379 (13)gb|ADR71251.1|6e-7140S ribosomal protein S15D [Hevea brasiliensis]
JMFF031C11Sequence614002379 (13)ref|XP_009611798.1|2e-71PREDICTED: 40S ribosomal protein S15 [Nicotiana tomentosiformis]680002379 (13)ref|XP_009611798.1|5e-71PREDICTED: 40S ribosomal protein S15 [Nicotiana tomentosiformis]
JMFF041F16Sequence659002379 (13)ref|XP_009611798.1|4e-71PREDICTED: 40S ribosomal protein S15 [Nicotiana tomentosiformis]610002379 (13)ref|XP_010069156.1|9e-66PREDICTED: 40S ribosomal protein S15-4-like [Eucalyptus grandis]
JMFN016E11Sequence637002379 (13)ref|XP_009611798.1|5e-71PREDICTED: 40S ribosomal protein S15 [Nicotiana tomentosiformis]
JMFN016L17Sequence592002379 (13)gb|ADR71251.1|3e-7140S ribosomal protein S15D [Hevea brasiliensis]
JMFN018P20Sequence620002379 (13)ref|XP_009611798.1|3e-71PREDICTED: 40S ribosomal protein S15 [Nicotiana tomentosiformis]
JMFN028L21Sequence626002379 (13)ref|XP_009611798.1|1e-70PREDICTED: 40S ribosomal protein S15 [Nicotiana tomentosiformis]
JMFN030F03Sequence515002379 (13)ref|XP_004241029.1|6e-46PREDICTED: 40S ribosomal protein S15 [Solanum lycopersicum]
JMSF039A18Sequence613002379 (13)ref|XP_009611798.1|5e-69PREDICTED: 40S ribosomal protein S15 [Nicotiana tomentosiformis]

Contig 2379 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig002379============================================ 739         
  59 ---------------------------------------------------------------------------------->JMFF031C11                    
     <-------------------------------------------------------------------------------------------rJMFF031C11  
 207 ---------------------------------------------------------------------------------------->JMFF041F16              
                  <----------------------------------------------------------rJMFF041F16  
 236     ----------------------------------------------------------------------->JMFF014L16                           
         <-------------------------------------------------------------------rJMFF014L16

The following clones don't have the opposite end in this pair.

        ------------------------------------------------------------------------------------>JMFN028L21-              
        ----------------------------------------------------------------------------------->JMFN018P20-               
                                   <---------------------------------------------------------------------JMFN030F03-  
       ------------------------------------------------------------------------------->JMFN016L17-                    
        ------------------------------------------------------------------------------------->JMFN016E11-             
     ---------------------------------------------------------------------------------->JMFF007A23-                   
     ---------------------------------------------------------------------------------->JMSF039A18-