clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF049I14 | Sequence | 624 | 002439 (6) | ref|XP_009791843.1| | 1e-80 | PREDICTED: 20 kDa chaperonin, chloroplastic [Nicotiana sylvestris] ref|XP_009791 | 618 | 002439 (6) | ref|XP_009618950.1| | 4e-50 | PREDICTED: 20 kDa chaperonin, chloroplastic-like [Nicotiana tomentosiformis] |
JMSF003A11 | Sequence | 211 | 002439 (6) | emb|CDP03050.1| | 2e-34 | unnamed protein product [Coffea canephora] | 612 | 002439 (6) | ref|XP_009618950.1| | 4e-74 | PREDICTED: 20 kDa chaperonin, chloroplastic-like [Nicotiana tomentosiformis] |
JMSF047D08 | Sequence | 663 | 002439 (6) | ref|XP_009791843.1| | 9e-88 | PREDICTED: 20 kDa chaperonin, chloroplastic [Nicotiana sylvestris] ref|XP_009791 | 766 | 002439 (6) | ref|XP_009618950.1| | 4e-94 | PREDICTED: 20 kDa chaperonin, chloroplastic-like [Nicotiana tomentosiformis] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig002439============================================1181 10 --------------------------------------------------->JMFF049I14 <---------------------------------------------------rJMFF049I14 131 ------------------------------------------------------->JMSF047D08 <---------------------------------------------------------rJMSF047D08 584 ----------------->JMSF003A11 <--------------------------------------------------rJMSF003A11
The following clones don't have the opposite end in this pair.