clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMSF003B17 | Sequence | 227 | 004422 (8) | ref|XP_009610046.1| | 85.5 | PREDICTED: uncharacterized protein LOC104103818 [Nicotiana tomentosiformis] | 764 | 004422 (8) | ref|XP_006359266.1| | 221 | PREDICTED: uncharacterized protein LOC102581141 [Solanum tuberosum] |
JMSF035F17 | Sequence | 671 | 004422 (8) | ref|XP_009610046.1| | 289 | PREDICTED: uncharacterized protein LOC104103818 [Nicotiana tomentosiformis] | 727 | 004422 (8) | ref|XP_006359266.1| | 192 | PREDICTED: uncharacterized protein LOC102581141 [Solanum tuberosum] |
JMSF036F17 | Sequence | 678 | 004422 (8) | ref|XP_006359266.1| | 144 | PREDICTED: uncharacterized protein LOC102581141 [Solanum tuberosum] | |||||
JMSF052F12 | Sequence | 670 | 004422 (8) | ref|XP_009610046.1| | 286 | PREDICTED: uncharacterized protein LOC104103818 [Nicotiana tomentosiformis] | |||||
JMSF052F13 | Sequence | 672 | 004422 (8) | ref|XP_009610046.1| | 291 | PREDICTED: uncharacterized protein LOC104103818 [Nicotiana tomentosiformis] | 905 | 004422 (8) | ref|XP_006359266.1| | 219 | PREDICTED: uncharacterized protein LOC102581141 [Solanum tuberosum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig004422============================================1388 1 ----------------------------------------------->JMSF052F13 <----------------------------------------------------------------rJMSF052F13 133 ----------------------------------------------->JMSF035F17 <---------------------------------------------------rJMSF035F17 158 --------------->JMSF003B17 <------------------------------------------------------rJMSF003B17
The following clones don't have the opposite end in this pair.
----------------------------------------------->JMSF052F12- <-----------------------------------------------rJMSF036F17-