clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF033P17 | Sequence | 481 | 001309 (7) | ref|XP_009601289.1| | 4e-53 | PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Nicotiana tomentosifo | 677 | 001309 (7) | ref|XP_009601289.1| | 5e-53 | PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Nicotiana tomentosifo |
JMFN018B12 | Sequence | 625 | 001309 (7) | ref|XP_009601289.1| | 7e-55 | PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Nicotiana tomentosifo | |||||
JMSF001H08 | Sequence | 422 | 001309 (7) | ref|XP_009601289.1| | 8e-39 | PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Nicotiana tomentosifo | 653 | 001309 (7) | ref|XP_009601289.1| | 4e-53 | PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Nicotiana tomentosifo |
JMSF012M24 | Sequence | 244 | 001309 (7) | ref|XP_009601289.1| | 2e-11 | PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Nicotiana tomentosifo | 674 | 001309 (7) | ref|XP_009601289.1| | 8e-53 | PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Nicotiana tomentosifo |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig001309============================================ 735 3 ---------------------------------------------------------------->JMFF033P17 <-------------------------------------------------------------------------------------------rJMFF033P17 63 -------------------------------->JMSF012M24 <-------------------------------------------------------------------------------------------rJMSF012M24 217 -------------------------------------------------------->JMSF001H08 <---------------------------------------------------------------------rJMSF001H08
The following clones don't have the opposite end in this pair.
---------------------------------------------------------------->JMFN018B12-