clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF046M18 | Sequence | 562 | 008879 (10) | emb|CDP14017.1| | 2e-19 | unnamed protein product [Coffea canephora] | 335 | 008879 (10) | ref|XP_006378658.1| | 3e-07 | hypothetical protein POPTR_0010s19580g [Populus trichocarpa] gb|ERP56455.1| hypo |
JMFN025B01 | Sequence | 633 | 008879 (10) | emb|CDP14017.1| | 9e-44 | unnamed protein product [Coffea canephora] | |||||
JMFS077B06 | Sequence | 621 | 008879 (10) | emb|CDP14017.1| | 4e-43 | unnamed protein product [Coffea canephora] | |||||
JMSF033N02 | Sequence | 683 | 008879 (10) | gb|KDO68955.1| | 1e-49 | hypothetical protein CISIN_1g022258mg [Citrus sinensis] | 676 | 008879 (10) | gb|EYU20007.1| | 1e-106 | hypothetical protein MIMGU_mgv1a010325mg [Erythranthe guttata] |
JMSF044F24 | Sequence | 825 | 008879 (10) | emb|CDP14017.1| | 6e-89 | unnamed protein product [Coffea canephora] | 728 | 008879 (10) | gb|EYU20007.1| | 4e-118 | hypothetical protein MIMGU_mgv1a010325mg [Erythranthe guttata] |
JMSF048A07 | Sequence | 699 | 008879 (10) | emb|CDP14017.1| | 5e-45 | unnamed protein product [Coffea canephora] | 735 | 008879 (10) | ref|XP_009610468.1| | 7e-89 | PREDICTED: CTD nuclear envelope phosphatase 1 homolog isoform X1 [Nicotiana tom |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig008879============================================1323 1 ----------------------------------------->JMFF046M18 <------------------------rJMFF046M18 115 ---------------------------------------------------->JMSF048A07 <-------------------------------------------------------rJMSF048A07 128 --------------------------------------------------->JMSF033N02 <--------------------------------------------------rJMSF033N02 237 ------------------------------------------------------------>JMSF044F24 <------------------------------------------------------rJMSF044F24
The following clones don't have the opposite end in this pair.
----------------------------------------------->JMFN025B01- ---------------------------------------------->JMFS077B06-