| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF046M18 | Sequence | 562 | 008879 (10) | emb|CDP14017.1| | 2e-19 | unnamed protein product [Coffea canephora] | 335 | 008879 (10) | ref|XP_006378658.1| | 3e-07 | hypothetical protein POPTR_0010s19580g [Populus trichocarpa] gb|ERP56455.1| hypo |
| JMFN025B01 | Sequence | 633 | 008879 (10) | emb|CDP14017.1| | 9e-44 | unnamed protein product [Coffea canephora] | |||||
| JMFS077B06 | Sequence | 621 | 008879 (10) | emb|CDP14017.1| | 4e-43 | unnamed protein product [Coffea canephora] | |||||
| JMSF033N02 | Sequence | 683 | 008879 (10) | gb|KDO68955.1| | 1e-49 | hypothetical protein CISIN_1g022258mg [Citrus sinensis] | 676 | 008879 (10) | gb|EYU20007.1| | 1e-106 | hypothetical protein MIMGU_mgv1a010325mg [Erythranthe guttata] |
| JMSF044F24 | Sequence | 825 | 008879 (10) | emb|CDP14017.1| | 6e-89 | unnamed protein product [Coffea canephora] | 728 | 008879 (10) | gb|EYU20007.1| | 4e-118 | hypothetical protein MIMGU_mgv1a010325mg [Erythranthe guttata] |
| JMSF048A07 | Sequence | 699 | 008879 (10) | emb|CDP14017.1| | 5e-45 | unnamed protein product [Coffea canephora] | 735 | 008879 (10) | ref|XP_009610468.1| | 7e-89 | PREDICTED: CTD nuclear envelope phosphatase 1 homolog isoform X1 [Nicotiana tom |
This contig is upended
. : . : . : . : . : . :
rJMFF046M18- CAA
____________________________________________________________
consensus CAA
. : . : . : . : . : . :
rJMFF046M18- TTTGTGGAAGTGATTATTGCCTATATAAGGATGXXXXXXXXXXXXXXXXXXXXXXXXXAC
____________________________________________________________
consensus TTTGTGGAAGTGATTATTGCCTATATAAGGATGNNNNNNNNNNNNNNNNNNNNNNNNNAC
. : . : . : . : . : . :
rJMFF046M18- AATAGTAGGGGACATACAAGAAAGCCCAATGACATTGGAAGAAAATAAAACTATAGACAT
rJMSF033N02- ACTATAGACAT
rJMSF044F24- ACTATAGACAT
rJMSF048A07- ACTATAGACAT
____________________________________________________________
consensus AATAGTAGGGGACATACAAGAAAGCCCAATGACATTGGAAGAAAATAAAACTATAGACAT
. : . : . : . : . : . :
rJMFF046M18- AGTTATACAAGAATCTGAGTGACAATCACAATTGTGCCACAG-ACCAAACAGACCTGCAT
rJMSF033N02- AGTTATACAAGAATCTGAGTGACAATCACAATTGTGCCACAG-ACCAGACAGACCTGCAT
rJMSF044F24- AGTTATACNAGANTCTGAGTGACAATCACAATTGTGCCACAGTACCAGACAGACCTGCAT
rJMSF048A07- AGTTATACAAGAATCNGAGTGACAATCANAATTGTGCCANAG-ACCAGACAGACCTGCAT
____________________________________________________________
consensus AGTTATACAAGAATCTGAGTGACAATCACAATTGTGCCACAG-ACCAGACAGACCTGCAT
. : . : . : . : . : . :
rJMFF046M18- TCATCAATCAATCCAAGATGTCTGCTACTCAAAACCTTAGGATGCATAATCTCATCCTGC
rJMSF033N02- TCATCAATCAATCCAAGATGTCTGCTACTCAAAACCTTAGGATGCATAATCTCATCCTGC
rJMSF044F24- TCATCAATCAATCCAAGATGTCTGCTACTCAAAACCTTAGGATGCATAATCTCATCCTGC
rJMSF048A07- TCATCAATCAATCCAAGATGTCTGCTACTCAAAACCTTAGGATGCATAATCTCATCCTGC
____________________________________________________________
consensus TCATCAATCAATCCAAGATGTCTGCTACTCAAAACCTTAGGATGCATAATCTCATCCTGC
. : . : . : . : . : . :
rJMFF046M18- ATTCATCAACCCAGAAGCTGGGATTCCTTGTTTCTTAAACCATTCAGGCATATGAAATTT
rJMSF033N02- ATTCATCAACCCAGAAGCTGGGATTCCTTGTTTCTTAAACCATTCAGGCATATGAAATTT
rJMSF044F24- ATTCATCAACCCAGAAGCTGGGATTCCTTGTTTCTTAAACCATTCAGGCATATGAAATTT
rJMSF048A07- ATTCATCAACCCAGAAGCTGGGATTCCTTGTTTCTTAAACCATTCAGGCATATGAAATTT
____________________________________________________________
consensus ATTCATCAACCCAGAAGCTGGGATTCCTTGTTTCTTAAACCATTCAGGCATATGAAATTT
. : . : . : . : . : . :
rJMFF046M18- TTCGTAGAGTGCCAGTCTGACATCCTTCTGTTG
rJMSF033N02- TTCGTAGAGTGCCAGTCTGACATCCTTCTGTTGAGAGAGGTGGTTCAGAAGAGGAAGTAT
rJMSF044F24- TTCGTAGAGTGCCAGTCTGACATCCTTCTGTTGAGAGAGGTGGTTCAGAAGAGGAAGTAT
rJMSF048A07- TTCGTAGAGTGCCAGTCTGACATCCTTCTGTTGAGAGAGGTGGTTCAGAAGAGGAAGTAT
____________________________________________________________
consensus TTCGTAGAGTGCCAGTCTGACATCCTTCTGTTGAGAGAGGTGGTTCAGAAGAGGAAGTAT
. : . : . : . : . : . :
rJMSF033N02- GACTTCCAGGAGCTGATGGTCATGCGGTTGCCCGGGAGAGAATGGAATGCAAGGAAT-CC
rJMSF044F24- GACTTCCAGGAGCTGATGGTCATGCGGTTGCCCGGGAGAGAATGGAATGCAAGGAAT-CC
rJMSF048A07- GACTTCCAGGAGCTGATGGTCATGCGGTTGCCCGGGAGAGAATGGAATGCAAGGAAT-CC
JMSF044F24+ CCCGGGAGAGAATGGAATGCAAGGAATNCC
____________________________________________________________
consensus GACTTCCAGGAGCTGATGGTCATGCGGTTGCCCGGGAGAGAATGGAATGCAAGGAAT-CC
. : . : . : . : . : . :
rJMSF033N02- CATTTAGTGGTTGCAGCAAGAAACTAAAAGGG-TTGTTATCAACAATAACAATTCTGCAT
rJMSF044F24- CATTTAGTGGTTGCAGCAAGAAACTAAAAGGG-TTGTTATCAACAATAACAATTCTGCAT
rJMSF048A07- CATTTAGTGGTTGCAGCAAGAAACTAAAAGGG-TTGTTATCAACAATAACAATTCTGCAT
JMSF044F24+ CATTTAGTGGTTGCAGCAAGAAACTAAAAGGGNTTGTTATCAACAATAACAATTCTGCAT
____________________________________________________________
consensus CATTTAGTGGTTGCAGCAAGAAACTAAAAGGG-TTGTTATCAACAATAACAATTCTGCAT
. : . : . : . : . : . :
rJMSF033N02- AAATCCTTCGATATGCTACACAGATCCTTCACGTGTTCTCGGTATTCCGTCCTGGTTGTA
rJMSF044F24- AAATCCTTCGATATGCTACACAGATCCTTCACGTGTTCTCGGTATTCCGTCCTGGTTGTA
rJMSF048A07- AAATCCTCCGATATGCTACACAGATCCTTCACGTGTTCTCGGTATTCCGTCCTGGTTGTA
JMSF044F24+ AAATCCTTCGATATGCTACACAGATCCTTCACGTGTTCTCGGTATTCCGTCCTGGTTGTA
____________________________________________________________
consensus AAATCCTTCGATATGCTACACAGATCCTTCACGTGTTCTCGGTATTCCGTCCTGGTTGTA
. : . : . : . : . : . :
rJMSF033N02- GAAGGCCTGTATAGTCTAAGAATGAATCGATTTTCAGTATCGATTTTGTCAACAAGGGGC
rJMSF044F24- GAAGGCCTGTATAGTCTAAGAATGAATCGATTTTCAGTATCGATTTTGTCAACAAGGGGC
rJMSF048A07- GAAGGCCTGTATAGTCTAAGAATGAATCGATTTTCAGTATCGATTTTGTCAACAAGGGGC
JMSF044F24+ GAAGGCCTGTATAGTCTAAGAATGAATCGATTTTCAGTATCGATTTTGTCAACAAGGGGC
____________________________________________________________
consensus GAAGGCCTGTATAGTCTAAGAATGAATCGATTTTCAGTATCGATTTTGTCAACAAGGGGC
. : . : . : . : . : . :
rJMSF033N02- CTCGCATAGCCTTCAAGCCCTGCAGTAAACAACACAAGGTCAGC-AAACTCGCTAAGTTG
rJMSF044F24- CTCGCATAGCCTTCAAGCCCTGCAGTAAACAACACAAGGTCAGC-AAACTCGCTAAGTTG
rJMSF048A07- CTCGCATAGCCTTCAAGCCCTGCAGTAAACAACACAAGGTCAGCAAAACTCGCTAAGTTG
JMSF044F24+ CTCGCATAGCCTTCAAGCCCTGCAGTAAACAACACAAGGTCAGC-AAACTCGCTAAGTTG
JMSF033N02+ GCAGTAAACAACACAAGGTCAGC-AAACTCGCTAAGTTG
JMFN025B01+ TCGCTAAGTTG
JMFS077B06+ TAAGTTG
JMSF048A07+ TGCAGTAAACAACACAAGGTCAGCAAAACTCGCTAAGTTG
____________________________________________________________
consensus CTCGCATAGCCTTCAAGCCCTGCAGTAAACAACACAAGGTCAGC-AAACTCGCTAAGTTG
. : . : . : . : . : . :
rJMSF033N02- TTTCAGAAATTGGCGAAGCCCGGGCCGTTCAAACACAGTCACATAGTTGATCTTAGGTTT
rJMSF044F24- TTTCAGAAATTGGCGAAGCCCGGGCCGTTCAAACACAGTCACATAGTTGATCTTAGGTTT
rJMSF048A07- TTTCAGAAATTGGCGAAGCCCGGGCCGTTCAAACACAGTCACATAGTTGATCTTAGGTTT
JMSF044F24+ TTTCAGAAATTGGCGAAGCCCGGGCCGTTCAAACACAGTCACATAGTTGATCTTAGGTTT
JMSF033N02+ TTTCAGAAATTGGCGAAGCCCGGGCCGTTCAAACACAGTCACATAGTTGATCTTAGGTTT
JMFN025B01+ TTTCAGAAATTGGCGAAGCCCGGGCCGTTCAAACACAGTCACATAGTTGATCTTAGGTTT
JMFS077B06+ TTTCAGAAATTGGCGAAGCCCGGGCCGTTCAAACACAGTCACATAGTTGATCTTAGGTTT
JMSF048A07+ TTTCAGAAATTGGCGAAGCCCGGGCCGTTCAAACACAGTCACATAGTTGATCTTAGGTTT
____________________________________________________________
consensus TTTCAGAAATTGGCGAAGCCCGGGCCGTTCAAACACAGTCACATAGTTGATCTTAGGTTT
. : . : . : . : . : . :
rJMSF033N02- GCCATCACATTCCTTCTCTGAAGATATGCACTCTAGCTCAAACCAATCCAGCCCAGCCTC
rJMSF044F24- GCCATCACATTCCTTCTCTGAAGATATGCACTCTAGCTCAAACCAATCCAGCCCAGCCTC
rJMSF048A07- GCCATCACATTCCTTCTCTGAAGATATGCACTCTAGCTCAAACCAATCCAGCCCAGCCTC
JMSF044F24+ GCCATCACATTCCTTCTCTGAAGATATGCACTCTAGCTCAAACCAATCCAGCCCAGCCTC
JMSF033N02+ GCCATCACATTCCTTCTCTGAAGATATGCACTCTAGCTCAAACCAATCCAGCCCAGCCTC
JMFN025B01+ GCCATCACATTCCTTCTCTGAAGATATGCACTCTAGCTCAAACCAATCCAGCCCAGCCTC
JMFS077B06+ GCCATCACATTCCTTCTCTGAAGATATGCACTCTAGCTCAAACCAATCCAGCCCAGCCTC
JMSF048A07+ GCCATCACATTCCTTCTCTGAAGATATGCACTCTAGCTCAAACCAATCCAGCCCAGCCTC
JMFF046M18+ CAAACCAATCCAGCCCAGCNTC
____________________________________________________________
consensus GCCATCACATTCCTTCTCTGAAGATATGCACTCTAGCTCAAACCAATCCAGCCCAGCCTC
. : . : . : . : . : . :
rJMSF033N02- AGTTGCC
rJMSF044F24- AGTTGCCTGAGTGCGTATTACAGGAGGCAAGCTCGATGTCTCATAAGCACAAACCAAAGT
rJMSF048A07- AGTTGCCTGAGTGCGTATTACAGGAGGCAAGCTCGATGTCTCATAAGCACAAACCAAAGT
JMSF044F24+ AGTTGCCTGAGTGCGTATTACAGGAGGCAAGCTCGATGTCTCATAAGCACAAACCAAAGT
JMSF033N02+ AGTTGCCTGAGTGCGTATTACAGGAGGCAAGCTCGATGTCTCATAAGCACAAACCAAAGT
JMFN025B01+ AGTTGCCTGAGTGCGTATTACAGGAGGCAAGCTCGATGTCTCATAAGCACAAACCAAAGT
JMFS077B06+ AGTTGCCTGAGTGCGTATTACAGGAGGCAAGCTCGATGTCTCATAAGCACAAACCAAAGT
JMSF048A07+ AGTTGCCTGAGTGCGTATTACAGGAGGCAAGCTCGATGTCTCATAAGCACAAACCAAAGT
JMFF046M18+ AGTTGCCTGAGTGCGTATTACAGGAGGCAAGCTCGATGTCTCATAAGCACAAACCAAAGT
____________________________________________________________
consensus AGTTGCCTGAGTGCGTATTACAGGAGGCAAGCTCGATGTCTCATAAGCACAAACCAAAGT
. : . : . : . : . : . :
rJMSF048A07- TTCATCC
JMSF044F24+ TTCATCCAAGTCCAGAACAACCGTGAGTCTAGGCAGACGAAGCTCGTCGACGCTTCCAGC
JMSF033N02+ TTCATCCAAGTCCAGAACAACCGTGAGTCTAGGCAGACGAAGCTCGTCGACGCTTCCAGC
JMFN025B01+ TTCATCCAAGTCCAGAACAACCGTGAGTCTAGGCAGACGAAGCTCGTCGACGCTTCCAGC
JMFS077B06+ TTCATCCAAGTCCAGAACAACCGTGAGTCTAGGCAGACGAAGCTCGTCGACGCTTCCAGC
JMSF048A07+ TTCATCCAAGTCCAGAACAACCGTGAGTCTAGGCAGACGAAGCTCGTCGACGCTTCCAGC
JMFF046M18+ TTCATCCAAGTCCAGAACAACCGTGAGTCTAGGCAGACGAAGCTCGTCGACGCTTCCAGC
____________________________________________________________
consensus TTCATCCAAGTCCAGAACAACCGTGAGTCTAGGCAGACGAAGCTCGTCGACGCTTCCAGC
. : . : . : . : . : . :
JMSF044F24+ GCCGATTTGCGCGGCGGAGGGCGGCGGCGCCTCCGCAGGCTCGTGAGACTCCGGGAGCTC
JMSF033N02+ GCCGATTTGCGCGGCGGAGGGCGGCGGCGCCTCCGCAGGCTCGTGAGACTCCGGGAGCTC
JMFN025B01+ GCCGATTTGCGCGGCGGAGGGCGGCGGCGCCTCCGCAGGCTCGTGAGACTCCGGGAGCTC
JMFS077B06+ GCCGATTTGCGCGGCGGAGGGCGGCGGCGCCTCCGCAGGCTCGTGAGACTCCGGGAGCTC
JMSF048A07+ GCCGATTTGCGCGGCGGAGGGCGGCGGCGCCTCCGCAGGCTCGTGAGACTCCGGGAGCTC
JMFF046M18+ GCCGATTTGCGCGGCGGAGGGCGGCGGCGCCTCCGCAGGCTCGTGAGACTCCGGGAGCTC
____________________________________________________________
consensus GCCGATTTGCGCGGCGGAGGGCGGCGGCGCCTCCGCAGGCTCGTGAGACTCCGGGAGCTC
. : . : . : . : . : . :
JMSF044F24+ GACGACCGGGAGAGGCTTGAATTGCGGAGAGGGAGGGGAGAGGGAGGAGAAGAGCTGAGT
JMSF033N02+ GACGACCGGGAGAGGCTTGAATTGCGGAGAGGGAGGGGAGAGGGAGGAGAAGAGCTGAGT
JMFN025B01+ GACGACCGGGAGAGGCTTGAATTGCGGAGAGGGAGGGGAGAGGGAGGAGAAGAGCTGAGT
JMFS077B06+ GACGACCGGGAGAGGCTTGAATTGCGGAGAGGGAGGGGAGAGGGAGGAGAAGAGCTGAGT
JMSF048A07+ GACGACCGGGAGAGGCTTGAATTGCGGAGAGGGAGGGGAGAGGGAGGAGAAGAGCTGAGT
JMFF046M18+ GACGACCGGGAGAGGCTTGAATTGCGGAGAGGGAGGGGAGAGGGAGGAGAAGAGCTGAGT
____________________________________________________________
consensus GACGACCGGGAGAGGCTTGAATTGCGGAGAGGGAGGGGAGAGGGAGGAGAAGAGCTGAGT
. : . : . : . : . : . :
JMSF044F24+ CAAAGACGGCGTGCCTCTGATGATCTGAACGAAGATCTGGAAGAAGAAGGCGAGCCAGTT
JMSF033N02+ CAAAGACGGCGTGCCTCTGATGATCTGAACGAAGATCTGGAAGAAGAAGGCGAGCCAGTT
JMFN025B01+ CAAAGACGGCGTGCCTCTGATGATCTGAACGAAGATCTGGAAGAAGAAGGCGAGCCAGTT
JMFS077B06+ CAAAGACGGCGTGCCTCTGATGATCTGAACGAAGATCTGGAAGAAGAAGGCGAGCCAGTT
JMSF048A07+ CAAAGACGGCGTGCCTCTGATGATCTGAACGAAGATCTGGAAGAAGAAGGCGAGCCAGTT
JMFF046M18+ CAAAGACGGCGTGCCTCTGATGATCTGAACGAAGATCTGGAAGAAGAAGGCGAGCCAGTT
____________________________________________________________
consensus CAAAGACGGCGTGCCTCTGATGATCTGAACGAAGATCTGGAAGAAGAAGGCGAGCCAGTT
. : . : . : . : . : . :
JMSF044F24+ GAGGAGCGTCCGCCACACTTGCAGCGTCTTCGGGGCGTAAACTTCGGATGCCTGCGTGAG
JMSF033N02+ GAGGAGCGTCCGCCACACTTGCAGCGTCTTCGGGGCGTAAACTTCGGATGCCTGCGTGAG
JMFN025B01+ GAGGAGCGTCCGCCACACTTGCAGCGTCTTCGGGGCGTAAACTTCGGATGCCTGCGTGAG
JMFS077B06+ GAGGAGCGTCCGCCACACTTGCAGCGTCTTCGGGGCGTAAACTTCGGATGCCTGCGTGAG
JMSF048A07+ GAGGAGCGTCCGCCACACTTGCAGCGTCTTCGGGGCGTAAACTTCGGATGCCTGCGTGAG
JMFF046M18+ GAGGAGCGTCCGCCACACTTGCAGCGTCTTCGGGGCGTAAACTTCGGATGCCTGCGTGAG
____________________________________________________________
consensus GAGGAGCGTCCGCCACACTTGCAGCGTCTTCGGGGCGTAAACTTCGGATGCCTGCGTGAG
. : . : . : . : . : . :
JMSF044F24+ CTCCGCCATGAAAGTCGCCGGAGTGCTCCGCCTCTGGTGCGTACGCAGTTAGCGT
JMSF033N02+ CTCCGCCATGAAAGTCGCCGGAGTGCTCCGCCTCTGGTGCGTACGCAGTTAGCGTGTGTG
JMFN025B01+ CTCCGCCATGAAAGTCGCCGGAGTGCTCCGCCTCTGGTGCGTACGCAGTTAGCGTGTGTG
JMFS077B06+ CTCCGCCATGAAAGTCGCCGGAGTGCTCCGCCTCTGGTGCGTACGCAGTTAGCGTGTGTG
JMSF048A07+ CTCCGCCATGAAAGTCGCCGGAGTGCTCCGCCTCTGGTGCGTACGCAGTTAGCGTGTGTG
JMFF046M18+ CTCCGCCATGAAAGTCGCCGGAGTGCTCCGCCTCTGGTGCGTACGCAGTTAGCGTGTGTG
____________________________________________________________
consensus CTCCGCCATGAAAGTCGCCGGAGTGCTCCGCCTCTGGTGCGTACGCAGTTAGCGTGTGTG
. : . : . : . : . : . :
JMSF033N02+ CAGTGGCGAGTGACACAGTTATTTGGATTATTAATCGCAAACGAAATTGGAATTTTATTT
JMFN025B01+ CAGTGGCGAGTGACACAGTTATTTGGATTATTAATCGCAAACGAAATTGGAATTTTATTT
JMFS077B06+ CAGTGGCGAGTGACACAGTTATTTGGATTATTAATCGCAAACGAAATTGGAATTTTATTT
JMSF048A07+ CAGTGGCGAGTGACACAGTTATTTGGATTATTAATCGCAAACGAAATTGGAATTTTATTT
JMFF046M18+ CAGTGGCGAGTGACACAGTTATTTGGATTATTAATCGCAAACGAAAGTGGAATTTTATTT
____________________________________________________________
consensus CAGTGGCGAGTGACACAGTTATTTGGATTATTAATCGCAAACGAAATTGGAATTTTATTT
. : . : . : . : . : . :
JMSF033N02+ TTCCATAATTTCTATGCTTTCCCTCCCAATAATCTTTGATCATT
JMFN025B01+ TTCCATAATTTCTATGCTTTCC
JMFS077B06+ TTCCATAATTTCTA
JMSF048A07+ TTCCATAATTTCTATGCTTTCCCTCCCAATAATCTTTGATCATTGGTCTGAGAACAA
JMFF046M18+ TTCCATAATTTCTATGCTTTCCCTCCCAATAATCTTTGATCATTGGTCTGAGAACAATAT
____________________________________________________________
consensus TTCCATAATTTCTATGCTTTCCCTCCCAATAATCTTTGATCATTGGTCTGAGAACAATAT