| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF005P03 | Sequence | 689 | 005809 (11) | emb|CDP01640.1| | 2e-46 | unnamed protein product [Coffea canephora] | |||||
| JMFN012H06 | Sequence | 622 | 005809 (11) | emb|CDP01640.1| | 3e-59 | unnamed protein product [Coffea canephora] | |||||
| JMFN014B12 | Sequence | 545 | 005809 (11) | emb|CDP01640.1| | 2e-46 | unnamed protein product [Coffea canephora] | |||||
| JMFN018A07 | Sequence | 626 | 005809 (11) | emb|CDP01640.1| | 3e-59 | unnamed protein product [Coffea canephora] | |||||
| JMFN046M23 | Sequence | 610 | 005809 (11) | emb|CDP01640.1| | 3e-59 | unnamed protein product [Coffea canephora] | |||||
| JMSF006M23 | Sequence | 369 | 005809 (11) | ref|XP_009765334.1| | 153 | PREDICTED: uncharacterized protein LOC104216893 [Nicotiana sylvestris] | 360 | 005809 (11) | ref|NP_197221.1| | 4e-18 | uncharacterized protein [Arabidopsis thaliana] ref|XP_006286604.1| hypothetical |
| JMSF045B01 | Sequence | 764 | 005809 (11) | emb|CDP01640.1| | 2e-58 | unnamed protein product [Coffea canephora] | 724 | 005809 (11) | emb|CDP01640.1| | 1e-58 | unnamed protein product [Coffea canephora] |
| JMSF045M02 | Sequence | 767 | 005809 (11) | emb|CDP01640.1| | 2e-58 | unnamed protein product [Coffea canephora] | 654 | 005809 (11) | emb|CDP01640.1| | 5e-59 | unnamed protein product [Coffea canephora] |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig005809============================================ 801 91 --------------------------------------------------------------------------------------------->JMSF045B01 <----------------------------------------------------------------------------------------rJMSF045B01 158 --------------------------------------------->JMSF006M23 <--------------------------------------------rJMSF006M23 263 ------------------------------------------------------------------------>JMSF045M02 <--------------------------------------------------------------------------------rJMSF045M02
The following clones don't have the opposite end in this pair.
------------------------------------------------------------------>JMFN014B12- ----------------------------------------------------------------------------->JMFN018A07- --------------------------------------------------------------------------->JMFN046M23- <-----------------------------------------------------------------------------JMFN012H06- <---------------------------------------------------------------rJMFF005P03-