clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF049J24 | Sequence | 633 | 003560 (8) | ref|XP_009771428.1| | 155 | PREDICTED: uncharacterized protein LOC104221965 [Nicotiana sylvestris] ref|XP_00 | 614 | 003560 (8) | ref|XP_006343834.1| | 166 | PREDICTED: uncharacterized protein LOC102578852 [Solanum tuberosum] |
JMFN019F16 | Sequence | 496 | 003560 (8) | ref|XP_009771428.1| | 127 | PREDICTED: uncharacterized protein LOC104221965 [Nicotiana sylvestris] ref|XP_00 | |||||
JMSF007K05 | Sequence | 398 | 003560 (8) | ||||||||
JMSF037J21 | Sequence | 634 | 003560 (8) | ref|XP_009771428.1| | 159 | PREDICTED: uncharacterized protein LOC104221965 [Nicotiana sylvestris] ref|XP_00 | 601 | 003560 (8) | ref|XP_009771428.1| | 161 | PREDICTED: uncharacterized protein LOC104221965 [Nicotiana sylvestris] ref|XP_00 |
JMSF040E19 | Sequence | 663 | 003560 (8) | ref|XP_009771428.1| | 169 | PREDICTED: uncharacterized protein LOC104221965 [Nicotiana sylvestris] ref|XP_00 | 850 | 003560 (8) | ref|XP_009771428.1| | 173 | PREDICTED: uncharacterized protein LOC104221965 [Nicotiana sylvestris] ref|XP_00 |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig003560============================================ 939 25 ------------------------------------------------------------------->JMSF037J21 <---------------------------------------------------------------rJMSF037J21 48 ------------------------------------------------------------------>JMFF049J24 <--------------------------------------------------------------rJMFF049J24 90 ---------------------------------------------------------------------->JMSF040E19 <-----------------------------------------------------------------------------------------rJMSF040E19
The following clones don't have the opposite end in this pair.
---------------------------------------------------->JMFN019F16- ----------------------------------------->JMSF007K05-