| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF049J24 | Sequence | 633 | 003560 (8) | ref|XP_009771428.1| | 155 | PREDICTED: uncharacterized protein LOC104221965 [Nicotiana sylvestris] ref|XP_00 | 614 | 003560 (8) | ref|XP_006343834.1| | 166 | PREDICTED: uncharacterized protein LOC102578852 [Solanum tuberosum] |
| JMFN019F16 | Sequence | 496 | 003560 (8) | ref|XP_009771428.1| | 127 | PREDICTED: uncharacterized protein LOC104221965 [Nicotiana sylvestris] ref|XP_00 | |||||
| JMSF007K05 | Sequence | 398 | 003560 (8) | ||||||||
| JMSF037J21 | Sequence | 634 | 003560 (8) | ref|XP_009771428.1| | 159 | PREDICTED: uncharacterized protein LOC104221965 [Nicotiana sylvestris] ref|XP_00 | 601 | 003560 (8) | ref|XP_009771428.1| | 161 | PREDICTED: uncharacterized protein LOC104221965 [Nicotiana sylvestris] ref|XP_00 |
| JMSF040E19 | Sequence | 663 | 003560 (8) | ref|XP_009771428.1| | 169 | PREDICTED: uncharacterized protein LOC104221965 [Nicotiana sylvestris] ref|XP_00 | 850 | 003560 (8) | ref|XP_009771428.1| | 173 | PREDICTED: uncharacterized protein LOC104221965 [Nicotiana sylvestris] ref|XP_00 |
This contig is upended
. : . : . : . : . : . :
rJMSF037J21- TCACATTTATCACTTTGCACATTACAAAATCTTTGAAAT
____________________________________________________________
consensus TCACATTTATCACTTTGCACATTACAAAATCTTTGAAAT
. : . : . : . : . : . :
rJMSF037J21- ATCGCAACCATGTGACAGCATTTTATGCATCCATGATATATTAAATATTTTCTTTACCTA
rJMFF049J24- TCGCAACCATGTGACAGCATTTTATGCATCCATGATATATTAAATATTTTCTTTACCTA
rJMSF040E19- AATATTTTCTTTACCTA
____________________________________________________________
consensus ATCGCAACCATGTGACAGCATTTTATGCATCCATGATATATTAAATATTTTCTTTACCTA
. : . : . : . : . : . :
rJMSF037J21- GATAGGAACTTACCGTATTATTCCAAACTCAAATCAAATGTATGCACAAAAATATTTCTT
rJMFF049J24- GATAGGAACTTACCGTATTATTCCAAACTCAAATCAAATGTATGCACAAAAATATTTCTT
rJMSF040E19- GATAGGAACTTACCGTATTATTCCAAACTCAAATCAAATGTATGCACAAAAATATTTCTT
____________________________________________________________
consensus GATAGGAACTTACCGTATTATTCCAAACTCAAATCAAATGTATGCACAAAAATATTTCTT
. : . : . : . : . : . :
rJMSF037J21- ATCACTAATCTAAACCCTGAATCTCGAAGTACAAACCTATGTTGTATTATCTTTGGCAGT
rJMFF049J24- ATCACTAATCTAAACCCTGAATCTCGAAGTACAAACCTATGTTGTATTATCTTTGGCAGT
rJMSF040E19- ATCACTAATCTAAACCCTGAATCTCGAAGTACAAACCTATGTTGTATTATCTTTGGCAGT
____________________________________________________________
consensus ATCACTAATCTAAACCCTGAATCTCGAAGTACAAACCTATGTTGTATTATCTTTGGCAGT
. : . : . : . : . : . :
rJMSF037J21- CTCTCTGATCAGGGCAAACAAGCTTCTGTATGTTGTCACCTCTTGAGTTTTCTTGCTCCT
rJMFF049J24- CTCTCTGATCAGGGCAAACAAGCTTCTGTATGTTGTCACCTCTTGAGTTTTCTTGCTCCT
JMSF040E19+ TCTTGCTCCT
rJMSF040E19- CTCTCTGATCAGGGCAAACAAGCTTCTGTATGTTGTCACCTCTTGAGTTTTCTTGCTCCT
____________________________________________________________
consensus CTCTCTGATCAGGGCAAACAAGCTTCTGTATGTTGTCACCTCTTGAGTTTTCTTGCTCCT
. : . : . : . : . : . :
rJMSF037J21- TCCTTCTTCTTGCTGGATTGAGCATCGTCGTTGATTCCTGCAGCATTGGCTCTTTCTCCT
rJMFF049J24- TCCTTCTTCTTGCTGGATTGAGCATCGTCGTTGATTCCTGCAGCATTGGCTCTTTCTCCT
JMSF040E19+ TCCTTCTTCTTGCTGGATTGAGCATCGTCGTTGATTCCTGCAGCATTGGCTCTTTCTCNT
JMSF037J21+ CTTCTTCTTGCTGGATTGAGCATCGTCGTTGATTCCTGCAGCATTGGCTCTTTCTCCT
rJMSF040E19- TCCTTCTTCTTGCTGGATTGAGCATCGTCGTTGATTCCTGCAGCATTGGCTCTTTCTCCT
JMFF049J24+ CATCGTCGTTGATTCNTGCAGCATT-GCTCTTTCTCCT
____________________________________________________________
consensus TCCTTCTTCTTGCTGGATTGAGCATCGTCGTTGATTCCTGCAGCATTGGCTCTTTCTCCT
. : . : . : . : . : . :
rJMSF037J21- CCCCCGGAGACGACTTCATCCATGCTTTGTCCAGTTCGCCTATACCTACCACCAGAAGCC
rJMFF049J24- CCCCCGGAGACGACTTCATCCATGCTTTGTCCAGTTCGCCTATACCTACCACCAGAAGCC
JMSF040E19+ CCCCCGGAGACGACTTCATCCATGCTTTGTCCAGTTCGCCTATACCTACCACCAGAAGCC
JMSF037J21+ CCCCCGGAGACGACTTCATCCATGCTTTGTCCAGTTCGCCTATACCTACCACCAGAAGCC
rJMSF040E19- CCCCCGGAGACGACTTCATCCATGCTTTGTCCAGTTCGCCTATACCTACCACCAGAAGCC
JMFN019F16+ ATACCTACCACCAAAAGCC
JMFF049J24+ CCNCCGGAGACGACTTCATCCATGCTTTGTCCAGTTCGCCTATACCTACCACCAGAAGCC
____________________________________________________________
consensus CCCCCGGAGACGACTTCATCCATGCTTTGTCCAGTTCGCCTATACCTACCACCAGAAGCC
. : . : . : . : . : . :
rJMSF037J21- ACAAATGCAGGACAAGGCCTGTATGCCTTTATCGGCCACCAACCAAATCCTGGGACTGTC
rJMFF049J24- ACAAATGCAGGACAAGGCCTGTATGCCTTTATCGGCCACCAACCAAATCCTGGGACTGTC
JMSF040E19+ ACAAATGCAGGACAAGGCCTGTATGCCTTTATCGGCCACCAACCAAATCCTGGGACTGTC
JMSF037J21+ ACAAATGCAGGACAAGGCCTGTATGCCTTTATCGGCCACCAACCAAATCCTGGGACTGTC
rJMSF040E19- ACAAATGCAGGACAAGGCCTGTATGCCTTTATCGGCCACCAACCAAATCCTGGGACTGTC
JMFN019F16+ ACAAATGCAGGACAAGGCCTGTATGCCTTTATCGGCCACCAACCAAATCCTGGGACTGTC
JMFF049J24+ ACAAATGCAGGACAAGGCCTGTATGCCTTTATCGGCCACCAACCAAATCCTGGGACTGTC
____________________________________________________________
consensus ACAAATGCAGGACAAGGCCTGTATGCCTTTATCGGCCACCAACCAAATCCTGGGACTGTC
. : . : . : . : . : . :
rJMSF037J21- GCGATCCCTCCTTGAATCCTTCCCTCGCCATTACAACCACTCTCCACGACTTCTTTCCCA
rJMFF049J24- GCGATCCCTCCTTGAATCCTTCCCTCGCCATTACAACCACTCTCCACGACTTCTTTCCCA
JMSF040E19+ GCGATCCCTCCTTGAATCCTTCCCTCGCCATTACAACCACTCTCCACGACTTCTTTCCCA
JMSF037J21+ GCGATCCCTCCTTGAATCCTTCCCTCGCCATTACAACCACTCTCCACGACTTCTTTCCCA
rJMSF040E19- GCGATCCCTCCTTGAATCCTTCCCTCGCCATTACAACCACTCTCCACGACTTCTTTCCCA
JMFN019F16+ GCGATCCCTCCTTGAATCCTTCCCTCGCCATTACAACCACTCTCCACGACTTCTTTCCCA
JMFF049J24+ GCGATCCCTCCTTGAATCCTTCCCTCGCCATTACAACCACTCTCCACGACTTCTTTCCCA
____________________________________________________________
consensus GCGATCCCTCCTTGAATCCTTCCCTCGCCATTACAACCACTCTCCACGACTTCTTTCCCA
. : . : . : . : . : . :
rJMSF037J21- CAGGCCTTGCAAGCCCCTGGAGAAAGAAACGAGTCAGAATCTTGAATGAGTGTGGAAAGA
rJMFF049J24- CAGGCCTTGCAAGCCCCTGGAGAAAGAAACGAGTCAGAATCTTGAATGAGTGTGGAAAGA
JMSF040E19+ CAGGCCTTGCAAGCCCCTGGAGAAAGAAACGAGTCAGAATCTTGAATGAGTGTGGAAAGA
JMSF037J21+ CAGGCCTTGCAAGCCCCTGGAGAAAGAAACGAGTCAGAATCTTGAATGAGTGTGGAAAGA
rJMSF040E19- CAGGCCTTGCAAGCCCCTGGAGAAAGAAACGAGTCAGAATCTTGAATGAGTGTGGAAAGA
JMFN019F16+ CAGGCCTTGCAAGCCCCTGGAGAAAGAAACGAGTCAGAATCTTGAATGAGTGTGGAAAGA
JMFF049J24+ CAGGCCTTGCAAGCCCCTGGAGAAAGAAACGAGTCAGAATCTTGAATGAGTGTGGAAAGA
JMSF007K05+ AAAGAAACGAGTCAGAATCTTGAATGAGTGTGGAAAGA
____________________________________________________________
consensus CAGGCCTTGCAAGCCCCTGGAGAAAGAAACGAGTCAGAATCTTGAATGAGTGTGGAAAGA
. : . : . : . : . : . :
rJMSF037J21- ACAACACCATCCTCGGGGGGAG
rJMFF049J24- ACAACACCATCCTCGGGGGGAGCGGAAGACCCACTTTCTTTTACTTCTTCTTC
JMSF040E19+ ACAACACCATCCTCGGGGGGAGCGGAAGACCCACTTTCTTTTACTTCTTCTTCCTCTTCG
JMSF037J21+ ACAACACCATCCTCGGGGGGAGCGGAAGACCCACTTTCTTTTACTTCTTCTTCCTCTTC-
rJMSF040E19- ACAACACCATCCTCGGGGGGAGCGGAAGACCCACTTTCTTTTACTTCTTCTTCCTCTTCG
JMFN019F16+ ACAACACCATCCTCGGGGGGAGCGGAAGACCCACTTTCTTTTACTTCTTCTTCCTCTTCG
JMFF049J24+ ACAACACCATCCTCGGGGGGAGCGGAAGACCCACTTTCTTTTACTTCTTCTTCCTCTTCG
JMSF007K05+ ACAACACCATCCTCGGGGGGAGCGGAAGACCCACTTTCTTTTACTTCTTCTTCCTCTTCG
____________________________________________________________
consensus ACAACACCATCCTCGGGGGGAGCGGAAGACCCACTTTCTTTTACTTCTTCTTCCTCTTCG
. : . : . : . : . : . :
JMSF040E19+ GCGAGAGGTGTTGGAGATGCTGAAGAAGCACAGAGAACCGGCGGCGACGACGGCGGCGGC
JMSF037J21+ ACGAGAGGTGTTGGAGATGCTGAAGAAGCACAGAGAACCGGCGGCGACGACGGCGGCGGC
rJMSF040E19- GCGAGAGGTGTTGGAGATGCTGAAGAAGCACAGAGAACCGGCGGCGACGACGGCGGCGGC
JMFN019F16+ GCGAGAGGTGTTGGAGATGCTGAAGAAGCACAGAGAACCGGCGGCGACGACGGCGGCGGC
JMFF049J24+ GCGAGAGGTGTTGGAGATGCTGAAGAAGCACAGAGAACCGGCGGCGACGACGGCGGCGGC
JMSF007K05+ GCGAGAGGTGTTGGAGATGCTGAAGAAGCACAGAGAACCGGCGGCGACGACGGCGGCGGC
____________________________________________________________
consensus GCGAGAGGTGTTGGAGATGCTGAAGAAGCACAGAGAACCGGCGGCGACGACGGCGGCGGC
. : . : . : . : . : . :
JMSF040E19+ GGCTCTTGTTTAGGGTTTCCGCCATAGCTAATGGAGAAAGACAATGACTTGTTGCGTCTG
JMSF037J21+ GGCTCTTGTTTAGGGTTTCCGCCATAGCTAATGGAGAAAGACAATGACTTGTTGCGTCTG
rJMSF040E19- GGCTCTTGTTTAGGGTTTCCGCCATAGCTAATGGAGAAAGACAATGACTTGTTGCGTCTG
JMFN019F16+ GGCTCTTGTTTAGGGTTTCCGCCATAGCTAATGGAGAAAGACAATGACTTGTTGCGTCTG
JMFF049J24+ GGCTCTTGTTTAGGGTTTCCGCCATAGCTAATGGAGAAAGACAATGACTTGTTGCGTCTG
JMSF007K05+ GGCTCTTGTTTAGGGTTTCCGCCATAGCTAATGGAGAAAGACAATGACTTGTTGCGTCTG
____________________________________________________________
consensus GGCTCTTGTTTAGGGTTTCCGCCATAGCTAATGGAGAAAGACAATGACTTGTTGCGTCTG
. : . : . : . : . : . :
JMSF040E19+ TACAGAATTTGCCTCGGTGCCAATACCAAAAATTCTCTGGTCGGTGGTTTTGGCACTGGG
JMSF037J21+ TACAGAATTTGCCTCGGTGCCAATACCAAAAATTCTCTGGTCGGTGGTTTTGGCACTGGG
rJMSF040E19- TACAGAATTTGCCTCGGTGCCAATACCAAAAATTCTCTGGTCGGTGGTTTTGGCACTGGG
JMFN019F16+ TACAGAATTTGCCTCGGTGCCAATACCAAAAATTCTCTGGTCGGTGGTTTTGGCACTGGG
JMFF049J24+ TACAGAATTTGCCTCGGTGCCAATACCAAAAATTCTCTGGTCGGTGGTTTTGGCACTGGG
JMSF007K05+ TACAGAATTTGCCTCGGTGCCAATACCAAAAATTCTCTGGTCGGTGGTTTTGGCACTGGG
____________________________________________________________
consensus TACAGAATTTGCCTCGGTGCCAATACCAAAAATTCTCTGGTCGGTGGTTTTGGCACTGGG
. : . : . : . : . : . :
JMSF040E19+ TGGAGGGCGGCGGCGCTTCCTCCGGTGACGGTGGCCATGGCGGTGGTGGACATTCTCTCT
JMSF037J21+ TGGAGGGCGGCGGCGCTTCCTCCGGTGACGGTGGCCATGGCGGTGGTGGACATTCTCTCT
rJMSF040E19- TGGAGGGCGGCGGCGCTTCCTCCGGTGACGGTGGCCATGGCGGTGGTGGACATTCTCTCT
JMFN019F16+ TGGAGGGCGGCGGCGCTTCCTCCGGTGACGGTGGCCATGGCGGTGGTGGACATTCTC
JMFF049J24+ TGGAGGGCGGCGGCGCTTCCTCCGGTGACGGTGGCCATGGCGGTGGTGGACATTCTCTCT
JMSF007K05+ TGGAGGGCGGCGGCGCTTCCTCCGGTGACGGTGGCCATGGCGGTGGTGGACATTCTCTCT
____________________________________________________________
consensus TGGAGGGCGGCGGCGCTTCCTCCGGTGACGGTGGCCATGGCGGTGGTGGACATTCTCTCT
. : . : . : . : . : . :
JMSF040E19+ CCCCGCCTCACTTCACTGTCAGTATAGGAGAGCCACACAGAAGAGATAACAG
JMSF037J21+ CCCCGCCTCACTTCACTGTCAGTATAGGAGAGCCAC
rJMSF040E19- CCCCGCCTCACTTCACTGTCAGTATAGGAGAGCCACACAGAAGAGATAACAG
JMFF049J24+ CCCCGCCTCACTTCACTGTCAGTATAGGAGAGCCACACAGAAGAGATAACAG
JMSF007K05+ CCCCGCCTCACTTCACTGTCAGTATAGGAGAGCCACACAGAAGAGATAACAGAACAGCCC
____________________________________________________________
consensus CCCCGCCTCACTTCACTGTCAGTATAGGAGAGCCACACAGAAGAGATAACAGAACAGCCC