clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFN041D22 | Sequence | 578 | 002804 (13) | ref|XP_008233566.1| | 2e-56 | PREDICTED: 60S ribosomal protein L23a [Prunus mume] ref|XP_008233567.1| PREDICTE | |||||
JMSF014F17 | Sequence | 484 | 002804 (13) | ref|XP_008233566.1| | 4e-50 | PREDICTED: 60S ribosomal protein L23a [Prunus mume] ref|XP_008233567.1| PREDICTE | 651 | 002804 (13) | ref|XP_008233566.1| | 4e-56 | PREDICTED: 60S ribosomal protein L23a [Prunus mume] ref|XP_008233567.1| PREDICTE |
JMSF014K24 | Sequence | 310 | 002804 (13) | ref|XP_008222915.1| | 3e-21 | PREDICTED: 60S ribosomal protein L23a-like [Prunus mume] | 594 | 002804 (13) | ref|XP_008233566.1| | 2e-56 | PREDICTED: 60S ribosomal protein L23a [Prunus mume] ref|XP_008233567.1| PREDICTE |
JMSF014L24 | Sequence | 365 | 002804 (13) | ref|XP_008222915.1| | 7e-35 | PREDICTED: 60S ribosomal protein L23a-like [Prunus mume] | 594 | 002804 (13) | ref|XP_008233566.1| | 2e-56 | PREDICTED: 60S ribosomal protein L23a [Prunus mume] ref|XP_008233567.1| PREDICTE |
JMSF020H10 | Sequence | 690 | 002804 (13) | ref|XP_008233566.1| | 7e-56 | PREDICTED: 60S ribosomal protein L23a [Prunus mume] ref|XP_008233567.1| PREDICTE | 648 | 002804 (13) | ref|XP_008233566.1| | 4e-56 | PREDICTED: 60S ribosomal protein L23a [Prunus mume] ref|XP_008233567.1| PREDICTE |
JMSF031I19 | Sequence | 694 | 002804 (13) | ref|XP_008233566.1| | 1e-51 | PREDICTED: 60S ribosomal protein L23a [Prunus mume] ref|XP_008233567.1| PREDICTE | 691 | 002804 (13) | ref|XP_008233566.1| | 1e-51 | PREDICTED: 60S ribosomal protein L23a [Prunus mume] ref|XP_008233567.1| PREDICTE |
JMSF051E01 | Sequence | 688 | 002804 (13) | ref|XP_008233566.1| | 7e-56 | PREDICTED: 60S ribosomal protein L23a [Prunus mume] ref|XP_008233567.1| PREDICTE | 653 | 002804 (13) | ref|XP_008233566.1| | 5e-56 | PREDICTED: 60S ribosomal protein L23a [Prunus mume] ref|XP_008233567.1| PREDICTE |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig002804============================================ 704 13 ------------------------------------------------------------------------------------------------->JMSF031I19 <-------------------------------------------------------------------------------------------------rJMSF031I19 53 -------------------------------------------------------------------->JMSF014F17 <-------------------------------------------------------------------------------------------rJMSF014F17 56 ------------------------------------------------------------------------------------------------>JMSF051E01 <-------------------------------------------------------------------------------------------rJMSF051E01 56 ------------------------------------------------------------------------------------------------->JMSF020H10 <-------------------------------------------------------------------------------------------rJMSF020H10 110 --------------------------------------------------->JMSF014L24 <-----------------------------------------------------------------------------------rJMSF014L24 129 ------------------------------------------->JMSF014K24 <---------------------------------------------------------------------------------rJMSF014K24
The following clones don't have the opposite end in this pair.
--------------------------------------------------------------------------------->JMFN041D22-