clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFN041D22 | Sequence | 578 | 002804 (13) | ref|XP_008233566.1| | 2e-56 | PREDICTED: 60S ribosomal protein L23a [Prunus mume] ref|XP_008233567.1| PREDICTE | |||||
JMSF014F17 | Sequence | 484 | 002804 (13) | ref|XP_008233566.1| | 4e-50 | PREDICTED: 60S ribosomal protein L23a [Prunus mume] ref|XP_008233567.1| PREDICTE | 651 | 002804 (13) | ref|XP_008233566.1| | 4e-56 | PREDICTED: 60S ribosomal protein L23a [Prunus mume] ref|XP_008233567.1| PREDICTE |
JMSF014K24 | Sequence | 310 | 002804 (13) | ref|XP_008222915.1| | 3e-21 | PREDICTED: 60S ribosomal protein L23a-like [Prunus mume] | 594 | 002804 (13) | ref|XP_008233566.1| | 2e-56 | PREDICTED: 60S ribosomal protein L23a [Prunus mume] ref|XP_008233567.1| PREDICTE |
JMSF014L24 | Sequence | 365 | 002804 (13) | ref|XP_008222915.1| | 7e-35 | PREDICTED: 60S ribosomal protein L23a-like [Prunus mume] | 594 | 002804 (13) | ref|XP_008233566.1| | 2e-56 | PREDICTED: 60S ribosomal protein L23a [Prunus mume] ref|XP_008233567.1| PREDICTE |
JMSF020H10 | Sequence | 690 | 002804 (13) | ref|XP_008233566.1| | 7e-56 | PREDICTED: 60S ribosomal protein L23a [Prunus mume] ref|XP_008233567.1| PREDICTE | 648 | 002804 (13) | ref|XP_008233566.1| | 4e-56 | PREDICTED: 60S ribosomal protein L23a [Prunus mume] ref|XP_008233567.1| PREDICTE |
JMSF031I19 | Sequence | 694 | 002804 (13) | ref|XP_008233566.1| | 1e-51 | PREDICTED: 60S ribosomal protein L23a [Prunus mume] ref|XP_008233567.1| PREDICTE | 691 | 002804 (13) | ref|XP_008233566.1| | 1e-51 | PREDICTED: 60S ribosomal protein L23a [Prunus mume] ref|XP_008233567.1| PREDICTE |
JMSF051E01 | Sequence | 688 | 002804 (13) | ref|XP_008233566.1| | 7e-56 | PREDICTED: 60S ribosomal protein L23a [Prunus mume] ref|XP_008233567.1| PREDICTE | 653 | 002804 (13) | ref|XP_008233566.1| | 5e-56 | PREDICTED: 60S ribosomal protein L23a [Prunus mume] ref|XP_008233567.1| PREDICTE |
This contig is upended
. : . : . : . : . : . :
JMSF051E01+ AAATAGAATGTATTGATGGAAGTTCATAATCTCCAAA
rJMSF051E01- AA
rJMSF020H10- AA
JMSF020H10+ GGAGAGAAAATAGAATGTATTGATGGAAGTTCATAATCTCCAAA
JMSF031I19+ AAATAGAATGTANTGATGGAAGTTCATAATCTCCAAA
rJMSF031I19- AAATAGAATGTATTGATGGAAGTTCATAATCTCCAAA
____________________________________________________________
consensus GGAGAGAAAATAGAATGTATTGATGGAAGTTCATAATCTCCAAA
. : . : . : . : . : . :
JMSF051E01+ GTAACATAATAGTAGAAGTTGACATAAAAGCTGATTAAACACCACTGGAATACTACCAGA
rJMSF051E01- GTAACATAATAGTAGAAGTTGACATAAAAGCTGATTAAACACCACTGGAATACTACCAGA
rJMSF020H10- GTAACATAATAGTAGAAGTTGACATAAAAGCTGATTAAACACCACTGGAATACTACCAGA
JMSF020H10+ GTAACATAATAGTAGAAGTTGACATAAAAGCTGATTAAACACCACTGGAATACTACCAGA
JMSF031I19+ GTAACATAATAGTAGAAGTTGACATAAAAGCTGATTAAACACCACTGGAATACTACCAGA
rJMSF031I19- GTAACATAATAGTAGAAGTTGACATAAAAGCTGATTAAACACCACTGGAATACTACCAGA
rJMSF014F17- ACATAATAGTAGAAGTTGACATAAAAGCTGATTAAACACCACTGGAATACTACCAGA
____________________________________________________________
consensus GTAACATAATAGTAGAAGTTGACATAAAAGCTGATTAAACACCACTGGAATACTACCAGA
. : . : . : . : . : . :
JMSF051E01+ ACTGTAAAAATACTAACACAAACAAGGTGTAACAAAATTTTCAATCTAGCATCAGCCTTA
rJMSF051E01- ACTGTAAAAATACTAACACAAACAAGGTGTAACAAAATTTTCAATCTAGCATCAGCCTTA
rJMSF020H10- ACTGTAAAAATACTAACACAAACAAGGTGTAACAAAATTTTCAATCTAGCATCAGCCTTA
JMSF020H10+ ACTGTAAAAATACTAACACAAACAAGGTGTAACAAAATTTTCAATCTAGCATCAGCCTTA
JMSF031I19+ ACTGTAAAAATACTAACACAAACAAGGTGTAACAAAATTTTCAATCTAGCATCAGCCTTA
rJMSF031I19- ACTGTAAAAATACTAACACAAACAAGGTGTAACAAAATTTTCAATCTAGCATCAGCCTTA
JMFN041D22+ AAAAATACTAACGCAAACAAGGTGTAACAAAATTTTCAATCTAGCATCATCCTTA
rJMSF014F17- ACTGTAAAAATACTAACACAAACAAGGTGTAACAAAATTTTCAATCTAGCATCAGCCTTA
rJMSF014L24- AAAATACTAACACAAACAAGGTGTAACAAAATTTTCAATCTAGCATCAGCCTTA
rJMSF014K24- GGTGTAACAAAATTTTCAATCTAGCATCAGCCTTA
____________________________________________________________
consensus ACTGTAAAAATACTAACACAAACAAGGTGTAACAAAATTTTCAATCTAGCATCAGCCTTA
. : . : . : . : . : . :
JMSF051E01+ GGCAAAAGAACAACATTATGTTTAGATGATTCCAATCTTGTTTGCAACATCCAATGCATC
rJMSF051E01- GGCAAAAGAACAACATTATGTTTAGATGATTCCAATCTTGTTTGCAACATCCAATGCATC
rJMSF020H10- GGCAAAAGAACAACATTATGTTTAGATGATTCCAATCTTGTTTGCAACATCCAATGCATC
JMSF020H10+ GGCAAAAGAACAACATTATGTTTAGATGATTCCAATCTTGTTTGCAACATCCAATGCATC
JMSF031I19+ GGCAAAAGAACAACATTATGTTTAGATGATTCCAATCTTGTTTGCAACATCCAATGCATC
rJMSF031I19- GGCAAAAGAACAACATTATGTTTAGATGATTCCAATCTTGTTTGCAACATCCAATGCATC
JMFN041D22+ GGCAAAAGAACAACATTATGTTTAGATGATTCCAATCTTGTTTGCAACATCCAATGCATC
rJMSF014F17- GGCAAAAGAACAACATTATGTTTAGATGATTCCAATCTTGTTTGCAACATCCAATGCATC
JMSF014F17+ CCAATGCATC
rJMSF014L24- GGCAAAAGAACAACATTATGTTTAGATGATTCCAATCTTGTTTGCAACATCCAATGCATC
rJMSF014K24- GGCAAAAGAACAACATTATGTTTAGATGATTCCAATCTTGTTTGCAACATCCAATGCATC
____________________________________________________________
consensus GGCAAAAGAACAACATTATGTTTAGATGATTCCAATCTTGTTTGCAACATCCAATGCATC
. : . : . : . : . : . :
JMSF051E01+ AAAGTCTGGAGTCAACCGGACGTATGCCTTCTTGGTACCATCAGGCCTGATCAAAGTGTT
rJMSF051E01- AAAGTCTGGAGTCAACCGGACGTATGCCTTCTTGGTACCATCAGGCCTGATCAAAGTGTT
rJMSF020H10- AAAGTCTGGAGTCAACCGGACGTATGCCTTCTTGGTACCATCAGGCCTGATCAAAGTGTT
JMSF020H10+ AAAGTCTGGAGTCAACCGGACGTATGCCTTCTTGGTACCATCAGGCCTGATCAAAGTGTT
JMSF031I19+ AAAGTCTGGAGTCAACCGGACGTATGCCTTCTTGGTACCATCAGGCCTGATCAAAGTGTT
rJMSF031I19- AAAGTCTGGAGTCAACCGGACGTATGCCTTCTTGGTACCATCAGGCCTGATCAAAGTGTT
JMFN041D22+ AAAGTCTGGAGTCAACCGGACGTATGCCTTCTTGGTACCATCAGGCCTGATCAAAGTGTT
rJMSF014F17- AAAGTCTGGAGTCAACCGGACGTATGCCTTCTTGGTACCATCAGGCCTGATCAAAGTGTT
JMSF014F17+ AAAGTCGGGAGTCAACCGGACGTATGCCTTCTTGGTACCATCAGGCCTGATCAAAGTGTT
rJMSF014L24- AAAGTCTGGAGTCAACCGGACGTATGCCTTCTTGGTACCATCAGGCCTGATCAAAGTGTT
rJMSF014K24- AAAGTCTGGAGTCAACCGGACGTATGCCTTCTTGGTACCATCAGGCCTGATCAAAGTGTT
____________________________________________________________
consensus AAAGTCTGGAGTCAACCGGACGTATGCCTTCTTGGTACCATCAGGCCTGATCAAAGTGTT
. : . : . : . : . : . :
JMSF051E01+ GACCTTCTTCGTCTGAATGTCATACATTTTCTTAACAGCATCCTTAATTTTCTTTTTGTC
rJMSF051E01- GACCTTCTTCGTCTGAATGTCATACATTTTCTTAACAGCATCCTTAATTTTCTTTTTGTC
rJMSF020H10- GACCTTCTTCGTCTGAATGTCATACATTTTCTTAACAGCATCCTTAATTTTCTTTTTGTC
JMSF020H10+ GACCTTCTTCGTCTGAATGTCATACATTTTCTTAACAGCATCCTTAATTTTCTTTTTGTC
JMSF031I19+ GACCTTCTTCGTCTGAATGTCATAAATTTTCTTAACAGCATCCTTAATTTTCTTTTTGTC
rJMSF031I19- GACCTTCTTCGTCTGAATGTCATAAATTTTCTTAACAGCATCCTTAATTTTCTTTTTGTC
JMFN041D22+ GACCTTCTTCGTCTGAATGTCATACATTTTCTTAGCAGCATCCTTAATTTTCTTTTTGTC
rJMSF014F17- GACCTTCTTCGTCTGAATGTCATACATTTTCTTAACAGCATCCTTAATTTTCTTTTTGTC
JMSF014F17+ GACCTTCTTCGTCTGAATGTCATACATTTTCTTAACAGCATCCTTAATTTTCTTTTTGTC
rJMSF014L24- GACCTTCTTCGTCTGAATGTCATACATTTTCTTAACAGCATCCTTAATTTTCTTTTTGTC
JMSF014L24+ TTGTC
rJMSF014K24- GACCTTCTTCGTCTGAATGTCATACATTTTCTTAACAGCATCCTTAATTTTCTTTTTGTC
____________________________________________________________
consensus GACCTTCTTCGTCTGAATGTCATACATTTTCTTAACAGCATCCTTAATTTTCTTTTTGTC
. : . : . : . : . : . :
JMSF051E01+ AGCACGGATGTCAACAATGAAAACCAGGGTGTTGTTATCCTCAATCTTTTTCATTGCAGA
rJMSF051E01- AGCACGGATGTCAACAATGAAAACCAGGGTGTTGTTATCCTCAATCTTTTTCATTGCAGA
rJMSF020H10- AGCACGGATGTCAACAATGAAAACCAGGGTGTTGTTATCCTCAATCTTTTTCATTGCAGA
JMSF020H10+ AGCACGGATGTCAACAATGAAAACCAGGGTGTTGTTATCCTCAATCTTTTTCATTGCAGA
JMSF031I19+ AGCACGGATGTCAACAATGAAAACCAGGGTGTTGTTATCCTCAATCTTTTTCATTGCAGA
rJMSF031I19- AGCACGGATGTCAACAATGAAAACCAGGGTGTTGTTATCCTCAATCTTTTTCATTGCAGA
JMFN041D22+ AGCACGGATGTCAACAATGAAAACCAGGGTGTTGTTATCCTCAATCTTTTTCATTGCAGA
rJMSF014F17- AGCACGGATGTCAACAATGAAAACCAGGGTGTTGTTATCCTCAATCTTTTTCATTGCAGA
JMSF014F17+ AGCACGGATGTCAACAATGAAAACCAGGGTGTTGTTATCCTCAATCTTTTTCATTGCAGA
rJMSF014L24- AGCACGGATGTCAACAATGAAAACCAGGGTGTTGTTATCCTCAATCTTTTTCATTGCAGA
JMSF014L24+ AGCACGGATGTCAACAATGAAAACCAGGGTGTTGTTATCCTCAATCTTTTTCATTGCAGA
JMSF014K24+ TCATTGCAGA
rJMSF014K24- AGCACGGATGTCAACAATGAAAACCAGGGTGTTGTTATCCTCAATCTTTTTCATTGCAGA
____________________________________________________________
consensus AGCACGGATGTCAACAATGAAAACCAGGGTGTTGTTATCCTCAATCTTTTTCATTGCAGA
. : . : . : . : . : . :
JMSF051E01+ CTCAGTGGTCAAGGGATATTTAAGGATTTGGTAATGGTCCAACTTGTTCCTTGGTGGAGC
rJMSF051E01- CTCAGTGGTCAAGGGATATTTAAGGATTTGGTAATGGTCCAACTTGTTCCTTGGTGGAGC
rJMSF020H10- CTCAGTGGTCAAGGGATATTTAAGGATTTGGTAATGGTCCAACTTGTTCCTTGGTGGAGC
JMSF020H10+ CTCAGTGGTCAAGGGATATTTAAGGATTTGGTAATGGTCCAACTTGTTCCTTGGTGGAGC
JMSF031I19+ CTCAGTGGTCAAGGGATATTTAAGGATTTGGTAATGGTCCAACTTGTTCCTTGGTGGAGC
rJMSF031I19- CTCAGTGGTCAAGGGATATTTAAGGATTTGGTAATGGTCCAACTTGTTCCTTGGTGGAGC
JMFN041D22+ CTCAGTGGTCAAGGGATATTTAAGGATTTGGTAATGGTCCAACTTGTTCCTTGGTGGAGC
rJMSF014F17- CTCAGTGGTCAAGGGATATTTAAGGATTTGGTAATGGTCCAACTTGTTCCTTGGTGGAGC
JMSF014F17+ CTCAGTGGTCAAGGGATATTTAAGGATTTGGTAATGGTCCAACTTGTTCCTTGGTGGAGC
rJMSF014L24- CTCAGTGGTCAAGGGATATTTAAGGATTTGGTAATGGTCCAACTTGTTCCTTGGTGGAGC
JMSF014L24+ CTCAGTGGTCAAGGGATATTTAAGGATTTGGTAATGGTCCAACTTGTTCCTTGGTGGAGC
JMSF014K24+ CTCAGTGGTCAAGGGATATTTAAGGATTTGGTAATGGTCCAACTTGTTCCTTGGTGGAGC
rJMSF014K24- CTCAGTGGTCAAGGGATATTTAAGGATTTGGTAATGGTCCAACTTGTTCCTTGGTGGAGC
____________________________________________________________
consensus CTCAGTGGTCAAGGGATATTTAAGGATTTGGTAATGGTCCAACTTGTTCCTTGGTGGAGC
. : . : . : . : . : . :
JMSF051E01+ ACTGATACGGGGGTACTTGGGGTTCCTCTCCTTCTTCAATGTCCTGGGCCTGTGGAAGGT
rJMSF051E01- ACTGATACGGGGGTACTTGGGGTTCCTCTCCTTCTTCAATGTCCTGGGCCTGTGGAAGGT
rJMSF020H10- ACTGATACGGGGGTACTTGGGGTTCCTCTCCTTCTTCAATGTCCTGGGCCTGTGGAAGGT
JMSF020H10+ ACTGATACGGGGGTACTTGGGGTTCCTCTCCTTCTTCAATGTCCTGGGCCTGTGGAAGGT
JMSF031I19+ ACTGATACGGGGGTACTTGGGGTTCCTCTCCTTCTTCAATGTCCTGGGCCTGTGGAAGGT
rJMSF031I19- ACTGATACGGGGGTACTTGGGGTTCCTCTCCTTCTTCAATGTCCTGGGCCTGTGGAAGGT
JMFN041D22+ ACTGATACGGGGGTACTTGGGGTTCCTCTCCTTCTTCAATGTCCTGGGCCTGTGGAAGGT
rJMSF014F17- ACTGATACGGGGGTACTTGGGGTTCCTCTCCTTCTTCAATGTCCTGGGCCTGTGGAAGGT
JMSF014F17+ ACTGATACGGGGGTACTTGGGGTTCCTCTCCTTCTTCAATGTCCTGGGCCTGTGGAAGGT
rJMSF014L24- ACTGATACGGGGGTACTTGGGGTTCCTCTCCTTCTTCAATGTCCTGGGCCTGTGGAAGGT
JMSF014L24+ ACTGATACGGGGGTACTTGGGGTTCCTCTCCTTCTTCAATGTCCTGGGCCTGTGGAAGGT
JMSF014K24+ ACTGATACGGGGGTACTTGGGGTTCCTCTCCTTCTTCAATGTCCTGGGCCTGTGGAAGGT
rJMSF014K24- ACTGATACGGGGGTACTTGGGGTTCCTCTCCTTCTTCAATGTCCTGGGCCTGTGGAAGGT
____________________________________________________________
consensus ACTGATACGGGGGTACTTGGGGTTCCTCTCCTTCTTCAATGTCCTGGGCCTGTGGAAGGT
. : . : . : . : . : . :
JMSF051E01+ AACTTTGGTGCGGACCTTCTTCGCCTTCTTCTTGAAGGTAGTACCTTTCACAGCCTTGGC
rJMSF051E01- AACTTTGGTGCGGACCTTCTTCGCCTTCTTCTTGAAGGTAGTACCTTTCACAGCCTTGGC
rJMSF020H10- AACTTTGGTGCGGACCTTCTTCGCCTTCTTCTTGAAGGTAGTACCTTTCACAGCCTTGGC
JMSF020H10+ AACTTTGGTGCGGACCTTCTTCGCCTTCTTCTTGAAGGTAGTACCTTTCACAGCCTTGGC
JMSF031I19+ AACTTTGGTGCGGATCTTCTTCGCCTTCTTCTTGAAGGTAGTACCTTTCACAGCCTTGGC
rJMSF031I19- AACTTTGGTGCGGATCTTCTTCGCCTTCTTCTTGAAGGTAGTACCTTTCACAGCCTTGGC
JMFN041D22+ AACTTTGGTGCGGATCTTCTTCGCCTTCTTCTTGAAGGTAGTACCTTTCACAGCCTTGGC
rJMSF014F17- AACTTTGGTGCGGATCTTCTTCGCCTTCTTCTTGAAGGTAGTACCTTTCACAGCCTTGGC
JMSF014F17+ AACTTTGGTGCGGATCTTCTTCGCCTTCTTCTTGAAGGTAGTACCTTTCACAGCCTTGGC
rJMSF014L24- AACTTTGGTGCGGATCTTCTTCGCCTTCTTCTTGAAGGTAGTACCTTTCACAGCCTTGGC
JMSF014L24+ AACTTTGGTGCGGATCTTCTTCGCCTTCTTCTTGAAGGTAGTACCTTTCACAGCCTTGGC
JMSF014K24+ AACTTTGGTGCGGATCTTCTTCGCCTTCTTCTTGAAGGTAGTACCTTTCACAGCCTTGGC
rJMSF014K24- AACTTTGGTGCGGATCTTCTTCGCCTTCTTCTTGAAGGTAGTACCTTTCACAGCCTTGGC
____________________________________________________________
consensus AACTTTGGTGCGGATCTTCTTCGCCTTCTTCTTGAAGGTAGTACCTTTCACAGCCTTGGC
. : . : . : . : . : . :
JMSF051E01+ AACCTTTGCGGCCTGAGCCTTTGGGTCAGCCTTTTTAGTACTATCACCTTTCGGAGCCAT
rJMSF051E01- AACCTTTGCGGCCTGAGCCTTTGGGTCAGCCTTTTTAGTACTATCACCTTTCGGAGCCAT
rJMSF020H10- AACCTTTGCGGCCTGAGCCTTTGGGTCAGCCTTTTTAGTACTATCACCTTTCGGAGCCAT
JMSF020H10+ AACCTTTGCGGCCTGAGCCTTTGGGTCAGCCTTTTTAGTACTATCACCTTTCGGAGCCAT
JMSF031I19+ AACCTTTGCGGCCTGAGCCTTTGGGTCAGCCTTTTTAGTACTATCACCTTTCGGAGCCAT
rJMSF031I19- AACCTTTGCGGCCTGAGCCTTTGGGTCAGCCTTTTTAGTACTATCACCTTTCGGAGCCAT
JMFN041D22+ AACCTTTGCGGCCTGAGCCTTTGGGTCAGCCTTTTTAGTACTATCACCTTTCGGAGCCAT
rJMSF014F17- AACCTTTGCGGCCTGAGCCTTTGGGTCAGCCTTTTTAGTACTATCACCTTTCGGAGCCAT
JMSF014F17+ AACCTTTGCGGCCTGAGCCTTTGGGTCAGCCTTTTTAGTACTATCACCTTTCGGAGCCAT
rJMSF014L24- AACCTTTGCGGCCTGAGCCTTTGGGTCAGCCTTTTTAGTACTATCACCTTTCGGAGCCAT
JMSF014L24+ AACCTTTGCGGCCTGAGCCTTTGGGTCAGCCTTTTTAGTACTATCACCTTTCGGAGCCAT
JMSF014K24+ AACCTTTGCGGCCTGAGCCTTTGGGTCAGCCTTTTTAGTACTATCACCTTTCGGAGCCAT
rJMSF014K24- AACCTTTGCGGCCTGAGCCTTTGGGTCAGCCTTTTTAGTACTATCACCTTTCGGAGCCAT
____________________________________________________________
consensus AACCTTTGCGGCCTGAGCCTTTGGGTCAGCCTTTTTAGTACTATCACCTTTCGGAGCCAT
. : . : . : . : . : . :
JMSF051E01+ TGGAGTTGCTTCAAATACACCTACCTGGCGGAAGACGAGCTGAACT
rJMSF051E01- TGGAGTTGCTTCAAATACACCTACCTGGCGGAAGACGAGCTGAACT
rJMSF020H10- TGGAGTTGCTTCAAATACACCTACCTGGCGGAAGACGAGCTGAACT
JMSF020H10+ TGGAGTTGCTTCAAATACACCTACCTGGCGGAAGACGAGCTGAACT
JMSF031I19+ TGGAGTTGCTTCAAATACACCTACCTGGCGGAAGACGAGCTGAACAGGTTGCTC
rJMSF031I19- TGGAGTTGCTTCAAATACACCTACCTGGCGGAAGACGAGCTGAACAGGTTGCTC
JMFN041D22+ TGGAGTTGCTTCAAATACACCTACCTGGCGGAAGACGAGC
rJMSF014F17- TGGAGTTGCTTCAAATACACCTACCTGGCGGAAGACGAGCTGAACAGGTTGCTC
JMSF014F17+ TGGAGTTGCTTCAAATACACCTACCTGGCGGAAGACGAGCTGAACAGGTTGCTC
rJMSF014L24- TGGAGTTGCTTCAAATACACCTACCTGGCGGAAGACGAGCTGAACAGGTTGCTGAAGAGC
JMSF014L24+ TGGAGTTGCTTCAAATACACCTACCTGGCGGAAGACGAGCTGAACAGGTTGCTGAAGAGC
JMSF014K24+ TGGAGTTGCTTCAAATACACCTACCTGGCGGAAGACGAGCTGAACAGGTTGCTGAAGAGC
rJMSF014K24- TGGAGTTGCTTCAAATACACCTACCTGGCGGAAGACGAGCTGAACAGGTTGCTGAAGAGC
____________________________________________________________
consensus TGGAGTTGCTTCAAATACACCTACCTGGCGGAAGACGAGCTGAACAGGTTGCTGAAGAGC