Contig 002804:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN041D22Sequence578002804 (13)ref|XP_008233566.1|2e-56PREDICTED: 60S ribosomal protein L23a [Prunus mume] ref|XP_008233567.1| PREDICTE
JMSF014F17Sequence484002804 (13)ref|XP_008233566.1|4e-50PREDICTED: 60S ribosomal protein L23a [Prunus mume] ref|XP_008233567.1| PREDICTE651002804 (13)ref|XP_008233566.1|4e-56PREDICTED: 60S ribosomal protein L23a [Prunus mume] ref|XP_008233567.1| PREDICTE
JMSF014K24Sequence310002804 (13)ref|XP_008222915.1|3e-21PREDICTED: 60S ribosomal protein L23a-like [Prunus mume]594002804 (13)ref|XP_008233566.1|2e-56PREDICTED: 60S ribosomal protein L23a [Prunus mume] ref|XP_008233567.1| PREDICTE
JMSF014L24Sequence365002804 (13)ref|XP_008222915.1|7e-35PREDICTED: 60S ribosomal protein L23a-like [Prunus mume]594002804 (13)ref|XP_008233566.1|2e-56PREDICTED: 60S ribosomal protein L23a [Prunus mume] ref|XP_008233567.1| PREDICTE
JMSF020H10Sequence690002804 (13)ref|XP_008233566.1|7e-56PREDICTED: 60S ribosomal protein L23a [Prunus mume] ref|XP_008233567.1| PREDICTE648002804 (13)ref|XP_008233566.1|4e-56PREDICTED: 60S ribosomal protein L23a [Prunus mume] ref|XP_008233567.1| PREDICTE
JMSF031I19Sequence694002804 (13)ref|XP_008233566.1|1e-51PREDICTED: 60S ribosomal protein L23a [Prunus mume] ref|XP_008233567.1| PREDICTE691002804 (13)ref|XP_008233566.1|1e-51PREDICTED: 60S ribosomal protein L23a [Prunus mume] ref|XP_008233567.1| PREDICTE
JMSF051E01Sequence688002804 (13)ref|XP_008233566.1|7e-56PREDICTED: 60S ribosomal protein L23a [Prunus mume] ref|XP_008233567.1| PREDICTE653002804 (13)ref|XP_008233566.1|5e-56PREDICTED: 60S ribosomal protein L23a [Prunus mume] ref|XP_008233567.1| PREDICTE

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF051E01+ AAATAGAATGTATTGATGGAAGTTCATAATCTCCAAA
rJMSF051E01- AA
rJMSF020H10- AA
JMSF020H10+ GGAGAGAAAATAGAATGTATTGATGGAAGTTCATAATCTCCAAA
JMSF031I19+ AAATAGAATGTANTGATGGAAGTTCATAATCTCCAAA
rJMSF031I19- AAATAGAATGTATTGATGGAAGTTCATAATCTCCAAA
                      ____________________________________________________________
consensus GGAGAGAAAATAGAATGTATTGATGGAAGTTCATAATCTCCAAA
 
. : . : . : . : . : . :
JMSF051E01+ GTAACATAATAGTAGAAGTTGACATAAAAGCTGATTAAACACCACTGGAATACTACCAGA
rJMSF051E01- GTAACATAATAGTAGAAGTTGACATAAAAGCTGATTAAACACCACTGGAATACTACCAGA
rJMSF020H10- GTAACATAATAGTAGAAGTTGACATAAAAGCTGATTAAACACCACTGGAATACTACCAGA
JMSF020H10+ GTAACATAATAGTAGAAGTTGACATAAAAGCTGATTAAACACCACTGGAATACTACCAGA
JMSF031I19+ GTAACATAATAGTAGAAGTTGACATAAAAGCTGATTAAACACCACTGGAATACTACCAGA
rJMSF031I19- GTAACATAATAGTAGAAGTTGACATAAAAGCTGATTAAACACCACTGGAATACTACCAGA
rJMSF014F17- ACATAATAGTAGAAGTTGACATAAAAGCTGATTAAACACCACTGGAATACTACCAGA
                      ____________________________________________________________
consensus GTAACATAATAGTAGAAGTTGACATAAAAGCTGATTAAACACCACTGGAATACTACCAGA
 
. : . : . : . : . : . :
JMSF051E01+ ACTGTAAAAATACTAACACAAACAAGGTGTAACAAAATTTTCAATCTAGCATCAGCCTTA
rJMSF051E01- ACTGTAAAAATACTAACACAAACAAGGTGTAACAAAATTTTCAATCTAGCATCAGCCTTA
rJMSF020H10- ACTGTAAAAATACTAACACAAACAAGGTGTAACAAAATTTTCAATCTAGCATCAGCCTTA
JMSF020H10+ ACTGTAAAAATACTAACACAAACAAGGTGTAACAAAATTTTCAATCTAGCATCAGCCTTA
JMSF031I19+ ACTGTAAAAATACTAACACAAACAAGGTGTAACAAAATTTTCAATCTAGCATCAGCCTTA
rJMSF031I19- ACTGTAAAAATACTAACACAAACAAGGTGTAACAAAATTTTCAATCTAGCATCAGCCTTA
JMFN041D22+ AAAAATACTAACGCAAACAAGGTGTAACAAAATTTTCAATCTAGCATCATCCTTA
rJMSF014F17- ACTGTAAAAATACTAACACAAACAAGGTGTAACAAAATTTTCAATCTAGCATCAGCCTTA
rJMSF014L24- AAAATACTAACACAAACAAGGTGTAACAAAATTTTCAATCTAGCATCAGCCTTA
rJMSF014K24- GGTGTAACAAAATTTTCAATCTAGCATCAGCCTTA
                      ____________________________________________________________
consensus ACTGTAAAAATACTAACACAAACAAGGTGTAACAAAATTTTCAATCTAGCATCAGCCTTA
 
. : . : . : . : . : . :
JMSF051E01+ GGCAAAAGAACAACATTATGTTTAGATGATTCCAATCTTGTTTGCAACATCCAATGCATC
rJMSF051E01- GGCAAAAGAACAACATTATGTTTAGATGATTCCAATCTTGTTTGCAACATCCAATGCATC
rJMSF020H10- GGCAAAAGAACAACATTATGTTTAGATGATTCCAATCTTGTTTGCAACATCCAATGCATC
JMSF020H10+ GGCAAAAGAACAACATTATGTTTAGATGATTCCAATCTTGTTTGCAACATCCAATGCATC
JMSF031I19+ GGCAAAAGAACAACATTATGTTTAGATGATTCCAATCTTGTTTGCAACATCCAATGCATC
rJMSF031I19- GGCAAAAGAACAACATTATGTTTAGATGATTCCAATCTTGTTTGCAACATCCAATGCATC
JMFN041D22+ GGCAAAAGAACAACATTATGTTTAGATGATTCCAATCTTGTTTGCAACATCCAATGCATC
rJMSF014F17- GGCAAAAGAACAACATTATGTTTAGATGATTCCAATCTTGTTTGCAACATCCAATGCATC
JMSF014F17+ CCAATGCATC
rJMSF014L24- GGCAAAAGAACAACATTATGTTTAGATGATTCCAATCTTGTTTGCAACATCCAATGCATC
rJMSF014K24- GGCAAAAGAACAACATTATGTTTAGATGATTCCAATCTTGTTTGCAACATCCAATGCATC
                      ____________________________________________________________
consensus GGCAAAAGAACAACATTATGTTTAGATGATTCCAATCTTGTTTGCAACATCCAATGCATC
 
. : . : . : . : . : . :
JMSF051E01+ AAAGTCTGGAGTCAACCGGACGTATGCCTTCTTGGTACCATCAGGCCTGATCAAAGTGTT
rJMSF051E01- AAAGTCTGGAGTCAACCGGACGTATGCCTTCTTGGTACCATCAGGCCTGATCAAAGTGTT
rJMSF020H10- AAAGTCTGGAGTCAACCGGACGTATGCCTTCTTGGTACCATCAGGCCTGATCAAAGTGTT
JMSF020H10+ AAAGTCTGGAGTCAACCGGACGTATGCCTTCTTGGTACCATCAGGCCTGATCAAAGTGTT
JMSF031I19+ AAAGTCTGGAGTCAACCGGACGTATGCCTTCTTGGTACCATCAGGCCTGATCAAAGTGTT
rJMSF031I19- AAAGTCTGGAGTCAACCGGACGTATGCCTTCTTGGTACCATCAGGCCTGATCAAAGTGTT
JMFN041D22+ AAAGTCTGGAGTCAACCGGACGTATGCCTTCTTGGTACCATCAGGCCTGATCAAAGTGTT
rJMSF014F17- AAAGTCTGGAGTCAACCGGACGTATGCCTTCTTGGTACCATCAGGCCTGATCAAAGTGTT
JMSF014F17+ AAAGTCGGGAGTCAACCGGACGTATGCCTTCTTGGTACCATCAGGCCTGATCAAAGTGTT
rJMSF014L24- AAAGTCTGGAGTCAACCGGACGTATGCCTTCTTGGTACCATCAGGCCTGATCAAAGTGTT
rJMSF014K24- AAAGTCTGGAGTCAACCGGACGTATGCCTTCTTGGTACCATCAGGCCTGATCAAAGTGTT
                      ____________________________________________________________
consensus AAAGTCTGGAGTCAACCGGACGTATGCCTTCTTGGTACCATCAGGCCTGATCAAAGTGTT
 
. : . : . : . : . : . :
JMSF051E01+ GACCTTCTTCGTCTGAATGTCATACATTTTCTTAACAGCATCCTTAATTTTCTTTTTGTC
rJMSF051E01- GACCTTCTTCGTCTGAATGTCATACATTTTCTTAACAGCATCCTTAATTTTCTTTTTGTC
rJMSF020H10- GACCTTCTTCGTCTGAATGTCATACATTTTCTTAACAGCATCCTTAATTTTCTTTTTGTC
JMSF020H10+ GACCTTCTTCGTCTGAATGTCATACATTTTCTTAACAGCATCCTTAATTTTCTTTTTGTC
JMSF031I19+ GACCTTCTTCGTCTGAATGTCATAAATTTTCTTAACAGCATCCTTAATTTTCTTTTTGTC
rJMSF031I19- GACCTTCTTCGTCTGAATGTCATAAATTTTCTTAACAGCATCCTTAATTTTCTTTTTGTC
JMFN041D22+ GACCTTCTTCGTCTGAATGTCATACATTTTCTTAGCAGCATCCTTAATTTTCTTTTTGTC
rJMSF014F17- GACCTTCTTCGTCTGAATGTCATACATTTTCTTAACAGCATCCTTAATTTTCTTTTTGTC
JMSF014F17+ GACCTTCTTCGTCTGAATGTCATACATTTTCTTAACAGCATCCTTAATTTTCTTTTTGTC
rJMSF014L24- GACCTTCTTCGTCTGAATGTCATACATTTTCTTAACAGCATCCTTAATTTTCTTTTTGTC
JMSF014L24+ TTGTC
rJMSF014K24- GACCTTCTTCGTCTGAATGTCATACATTTTCTTAACAGCATCCTTAATTTTCTTTTTGTC
                      ____________________________________________________________
consensus GACCTTCTTCGTCTGAATGTCATACATTTTCTTAACAGCATCCTTAATTTTCTTTTTGTC
 
. : . : . : . : . : . :
JMSF051E01+ AGCACGGATGTCAACAATGAAAACCAGGGTGTTGTTATCCTCAATCTTTTTCATTGCAGA
rJMSF051E01- AGCACGGATGTCAACAATGAAAACCAGGGTGTTGTTATCCTCAATCTTTTTCATTGCAGA
rJMSF020H10- AGCACGGATGTCAACAATGAAAACCAGGGTGTTGTTATCCTCAATCTTTTTCATTGCAGA
JMSF020H10+ AGCACGGATGTCAACAATGAAAACCAGGGTGTTGTTATCCTCAATCTTTTTCATTGCAGA
JMSF031I19+ AGCACGGATGTCAACAATGAAAACCAGGGTGTTGTTATCCTCAATCTTTTTCATTGCAGA
rJMSF031I19- AGCACGGATGTCAACAATGAAAACCAGGGTGTTGTTATCCTCAATCTTTTTCATTGCAGA
JMFN041D22+ AGCACGGATGTCAACAATGAAAACCAGGGTGTTGTTATCCTCAATCTTTTTCATTGCAGA
rJMSF014F17- AGCACGGATGTCAACAATGAAAACCAGGGTGTTGTTATCCTCAATCTTTTTCATTGCAGA
JMSF014F17+ AGCACGGATGTCAACAATGAAAACCAGGGTGTTGTTATCCTCAATCTTTTTCATTGCAGA
rJMSF014L24- AGCACGGATGTCAACAATGAAAACCAGGGTGTTGTTATCCTCAATCTTTTTCATTGCAGA
JMSF014L24+ AGCACGGATGTCAACAATGAAAACCAGGGTGTTGTTATCCTCAATCTTTTTCATTGCAGA
JMSF014K24+ TCATTGCAGA
rJMSF014K24- AGCACGGATGTCAACAATGAAAACCAGGGTGTTGTTATCCTCAATCTTTTTCATTGCAGA
                      ____________________________________________________________
consensus AGCACGGATGTCAACAATGAAAACCAGGGTGTTGTTATCCTCAATCTTTTTCATTGCAGA
 
. : . : . : . : . : . :
JMSF051E01+ CTCAGTGGTCAAGGGATATTTAAGGATTTGGTAATGGTCCAACTTGTTCCTTGGTGGAGC
rJMSF051E01- CTCAGTGGTCAAGGGATATTTAAGGATTTGGTAATGGTCCAACTTGTTCCTTGGTGGAGC
rJMSF020H10- CTCAGTGGTCAAGGGATATTTAAGGATTTGGTAATGGTCCAACTTGTTCCTTGGTGGAGC
JMSF020H10+ CTCAGTGGTCAAGGGATATTTAAGGATTTGGTAATGGTCCAACTTGTTCCTTGGTGGAGC
JMSF031I19+ CTCAGTGGTCAAGGGATATTTAAGGATTTGGTAATGGTCCAACTTGTTCCTTGGTGGAGC
rJMSF031I19- CTCAGTGGTCAAGGGATATTTAAGGATTTGGTAATGGTCCAACTTGTTCCTTGGTGGAGC
JMFN041D22+ CTCAGTGGTCAAGGGATATTTAAGGATTTGGTAATGGTCCAACTTGTTCCTTGGTGGAGC
rJMSF014F17- CTCAGTGGTCAAGGGATATTTAAGGATTTGGTAATGGTCCAACTTGTTCCTTGGTGGAGC
JMSF014F17+ CTCAGTGGTCAAGGGATATTTAAGGATTTGGTAATGGTCCAACTTGTTCCTTGGTGGAGC
rJMSF014L24- CTCAGTGGTCAAGGGATATTTAAGGATTTGGTAATGGTCCAACTTGTTCCTTGGTGGAGC
JMSF014L24+ CTCAGTGGTCAAGGGATATTTAAGGATTTGGTAATGGTCCAACTTGTTCCTTGGTGGAGC
JMSF014K24+ CTCAGTGGTCAAGGGATATTTAAGGATTTGGTAATGGTCCAACTTGTTCCTTGGTGGAGC
rJMSF014K24- CTCAGTGGTCAAGGGATATTTAAGGATTTGGTAATGGTCCAACTTGTTCCTTGGTGGAGC
                      ____________________________________________________________
consensus CTCAGTGGTCAAGGGATATTTAAGGATTTGGTAATGGTCCAACTTGTTCCTTGGTGGAGC
 
. : . : . : . : . : . :
JMSF051E01+ ACTGATACGGGGGTACTTGGGGTTCCTCTCCTTCTTCAATGTCCTGGGCCTGTGGAAGGT
rJMSF051E01- ACTGATACGGGGGTACTTGGGGTTCCTCTCCTTCTTCAATGTCCTGGGCCTGTGGAAGGT
rJMSF020H10- ACTGATACGGGGGTACTTGGGGTTCCTCTCCTTCTTCAATGTCCTGGGCCTGTGGAAGGT
JMSF020H10+ ACTGATACGGGGGTACTTGGGGTTCCTCTCCTTCTTCAATGTCCTGGGCCTGTGGAAGGT
JMSF031I19+ ACTGATACGGGGGTACTTGGGGTTCCTCTCCTTCTTCAATGTCCTGGGCCTGTGGAAGGT
rJMSF031I19- ACTGATACGGGGGTACTTGGGGTTCCTCTCCTTCTTCAATGTCCTGGGCCTGTGGAAGGT
JMFN041D22+ ACTGATACGGGGGTACTTGGGGTTCCTCTCCTTCTTCAATGTCCTGGGCCTGTGGAAGGT
rJMSF014F17- ACTGATACGGGGGTACTTGGGGTTCCTCTCCTTCTTCAATGTCCTGGGCCTGTGGAAGGT
JMSF014F17+ ACTGATACGGGGGTACTTGGGGTTCCTCTCCTTCTTCAATGTCCTGGGCCTGTGGAAGGT
rJMSF014L24- ACTGATACGGGGGTACTTGGGGTTCCTCTCCTTCTTCAATGTCCTGGGCCTGTGGAAGGT
JMSF014L24+ ACTGATACGGGGGTACTTGGGGTTCCTCTCCTTCTTCAATGTCCTGGGCCTGTGGAAGGT
JMSF014K24+ ACTGATACGGGGGTACTTGGGGTTCCTCTCCTTCTTCAATGTCCTGGGCCTGTGGAAGGT
rJMSF014K24- ACTGATACGGGGGTACTTGGGGTTCCTCTCCTTCTTCAATGTCCTGGGCCTGTGGAAGGT
                      ____________________________________________________________
consensus ACTGATACGGGGGTACTTGGGGTTCCTCTCCTTCTTCAATGTCCTGGGCCTGTGGAAGGT
 
. : . : . : . : . : . :
JMSF051E01+ AACTTTGGTGCGGACCTTCTTCGCCTTCTTCTTGAAGGTAGTACCTTTCACAGCCTTGGC
rJMSF051E01- AACTTTGGTGCGGACCTTCTTCGCCTTCTTCTTGAAGGTAGTACCTTTCACAGCCTTGGC
rJMSF020H10- AACTTTGGTGCGGACCTTCTTCGCCTTCTTCTTGAAGGTAGTACCTTTCACAGCCTTGGC
JMSF020H10+ AACTTTGGTGCGGACCTTCTTCGCCTTCTTCTTGAAGGTAGTACCTTTCACAGCCTTGGC
JMSF031I19+ AACTTTGGTGCGGATCTTCTTCGCCTTCTTCTTGAAGGTAGTACCTTTCACAGCCTTGGC
rJMSF031I19- AACTTTGGTGCGGATCTTCTTCGCCTTCTTCTTGAAGGTAGTACCTTTCACAGCCTTGGC
JMFN041D22+ AACTTTGGTGCGGATCTTCTTCGCCTTCTTCTTGAAGGTAGTACCTTTCACAGCCTTGGC
rJMSF014F17- AACTTTGGTGCGGATCTTCTTCGCCTTCTTCTTGAAGGTAGTACCTTTCACAGCCTTGGC
JMSF014F17+ AACTTTGGTGCGGATCTTCTTCGCCTTCTTCTTGAAGGTAGTACCTTTCACAGCCTTGGC
rJMSF014L24- AACTTTGGTGCGGATCTTCTTCGCCTTCTTCTTGAAGGTAGTACCTTTCACAGCCTTGGC
JMSF014L24+ AACTTTGGTGCGGATCTTCTTCGCCTTCTTCTTGAAGGTAGTACCTTTCACAGCCTTGGC
JMSF014K24+ AACTTTGGTGCGGATCTTCTTCGCCTTCTTCTTGAAGGTAGTACCTTTCACAGCCTTGGC
rJMSF014K24- AACTTTGGTGCGGATCTTCTTCGCCTTCTTCTTGAAGGTAGTACCTTTCACAGCCTTGGC
                      ____________________________________________________________
consensus AACTTTGGTGCGGATCTTCTTCGCCTTCTTCTTGAAGGTAGTACCTTTCACAGCCTTGGC
 
. : . : . : . : . : . :
JMSF051E01+ AACCTTTGCGGCCTGAGCCTTTGGGTCAGCCTTTTTAGTACTATCACCTTTCGGAGCCAT
rJMSF051E01- AACCTTTGCGGCCTGAGCCTTTGGGTCAGCCTTTTTAGTACTATCACCTTTCGGAGCCAT
rJMSF020H10- AACCTTTGCGGCCTGAGCCTTTGGGTCAGCCTTTTTAGTACTATCACCTTTCGGAGCCAT
JMSF020H10+ AACCTTTGCGGCCTGAGCCTTTGGGTCAGCCTTTTTAGTACTATCACCTTTCGGAGCCAT
JMSF031I19+ AACCTTTGCGGCCTGAGCCTTTGGGTCAGCCTTTTTAGTACTATCACCTTTCGGAGCCAT
rJMSF031I19- AACCTTTGCGGCCTGAGCCTTTGGGTCAGCCTTTTTAGTACTATCACCTTTCGGAGCCAT
JMFN041D22+ AACCTTTGCGGCCTGAGCCTTTGGGTCAGCCTTTTTAGTACTATCACCTTTCGGAGCCAT
rJMSF014F17- AACCTTTGCGGCCTGAGCCTTTGGGTCAGCCTTTTTAGTACTATCACCTTTCGGAGCCAT
JMSF014F17+ AACCTTTGCGGCCTGAGCCTTTGGGTCAGCCTTTTTAGTACTATCACCTTTCGGAGCCAT
rJMSF014L24- AACCTTTGCGGCCTGAGCCTTTGGGTCAGCCTTTTTAGTACTATCACCTTTCGGAGCCAT
JMSF014L24+ AACCTTTGCGGCCTGAGCCTTTGGGTCAGCCTTTTTAGTACTATCACCTTTCGGAGCCAT
JMSF014K24+ AACCTTTGCGGCCTGAGCCTTTGGGTCAGCCTTTTTAGTACTATCACCTTTCGGAGCCAT
rJMSF014K24- AACCTTTGCGGCCTGAGCCTTTGGGTCAGCCTTTTTAGTACTATCACCTTTCGGAGCCAT
                      ____________________________________________________________
consensus AACCTTTGCGGCCTGAGCCTTTGGGTCAGCCTTTTTAGTACTATCACCTTTCGGAGCCAT
 
. : . : . : . : . : . :
JMSF051E01+ TGGAGTTGCTTCAAATACACCTACCTGGCGGAAGACGAGCTGAACT
rJMSF051E01- TGGAGTTGCTTCAAATACACCTACCTGGCGGAAGACGAGCTGAACT
rJMSF020H10- TGGAGTTGCTTCAAATACACCTACCTGGCGGAAGACGAGCTGAACT
JMSF020H10+ TGGAGTTGCTTCAAATACACCTACCTGGCGGAAGACGAGCTGAACT
JMSF031I19+ TGGAGTTGCTTCAAATACACCTACCTGGCGGAAGACGAGCTGAACAGGTTGCTC
rJMSF031I19- TGGAGTTGCTTCAAATACACCTACCTGGCGGAAGACGAGCTGAACAGGTTGCTC
JMFN041D22+ TGGAGTTGCTTCAAATACACCTACCTGGCGGAAGACGAGC
rJMSF014F17- TGGAGTTGCTTCAAATACACCTACCTGGCGGAAGACGAGCTGAACAGGTTGCTC
JMSF014F17+ TGGAGTTGCTTCAAATACACCTACCTGGCGGAAGACGAGCTGAACAGGTTGCTC
rJMSF014L24- TGGAGTTGCTTCAAATACACCTACCTGGCGGAAGACGAGCTGAACAGGTTGCTGAAGAGC
JMSF014L24+ TGGAGTTGCTTCAAATACACCTACCTGGCGGAAGACGAGCTGAACAGGTTGCTGAAGAGC
JMSF014K24+ TGGAGTTGCTTCAAATACACCTACCTGGCGGAAGACGAGCTGAACAGGTTGCTGAAGAGC
rJMSF014K24- TGGAGTTGCTTCAAATACACCTACCTGGCGGAAGACGAGCTGAACAGGTTGCTGAAGAGC
                      ____________________________________________________________
consensus TGGAGTTGCTTCAAATACACCTACCTGGCGGAAGACGAGCTGAACAGGTTGCTGAAGAGC