clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF017H09 | Sequence | 532 | 005857 (6) | emb|CDP18653.1| | 1e-20 | unnamed protein product [Coffea canephora] | 713 | 005857 (6) | ref|XP_010653794.1| | 5e-39 | PREDICTED: remorin-like [Vitis vinifera] |
JMSF045K24 | Sequence | 431 | 005857 (6) | emb|CDP18653.1| | 8e-21 | unnamed protein product [Coffea canephora] | 693 | 005857 (6) | ref|XP_010653794.1| | 2e-38 | PREDICTED: remorin-like [Vitis vinifera] |
JMSF052N20 | Sequence | 571 | 005857 (6) | gb|KDP26032.1| | 2e-46 | hypothetical protein JCGZ_21065 [Jatropha curcas] | 862 | 005857 (6) | ref|XP_010653794.1| | 9e-44 | PREDICTED: remorin-like [Vitis vinifera] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig005857============================================1199 18 ------------------------------------------->JMFF017H09 <----------------------------------------------------------rJMFF017H09 88 ----------------------------------------------->JMSF052N20 <-----------------------------------------------------------------------rJMSF052N20 109 ----------------------------------->JMSF045K24 <---------------------------------------------------------rJMSF045K24
The following clones don't have the opposite end in this pair.