clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF008B18 | Sequence | 551 | 008153 (10) | ref|XP_009610114.1| | 2e-06 | PREDICTED: uncharacterized protein LOC104103875 isoform X1 [Nicotiana tomentosi | 730 | 008153 (10) | ref|XP_002321219.1| | 2e-61 | hypothetical protein POPTR_0014s17100g [Populus trichocarpa] gb|EEE99534.1| hypo |
JMFF012D12 | Sequence | 486 | 008153 (10) | ref|XP_009610114.1| | 1e-08 | PREDICTED: uncharacterized protein LOC104103875 isoform X1 [Nicotiana tomentosi | 709 | 008153 (10) | ref|XP_002321219.1| | 3e-62 | hypothetical protein POPTR_0014s17100g [Populus trichocarpa] gb|EEE99534.1| hypo |
JMFF030G09 | Sequence | 468 | 008153 (10) | 720 | 008153 (10) | ref|XP_002321219.1| | 3e-61 | hypothetical protein POPTR_0014s17100g [Populus trichocarpa] gb|EEE99534.1| hypo | |||
JMSF003P09 | Sequence | 233 | 008153 (10) | 504 | 008153 (10) | ref|XP_002321219.1| | 5e-62 | hypothetical protein POPTR_0014s17100g [Populus trichocarpa] gb|EEE99534.1| hypo | |||
JMSF017P05 | Sequence | 469 | 008153 (10) | gb|ABK96133.1| | 2e-20 | unknown [Populus trichocarpa] | 783 | 008153 (10) | ref|XP_002321219.1| | 6e-62 | hypothetical protein POPTR_0014s17100g [Populus trichocarpa] gb|EEE99534.1| hypo |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig008153============================================1019 19 ---------------------->JMSF003P09 <------------------------------------------------rJMSF003P09 41 ----------------------------------------------------->JMFF008B18 <-----------------------------------------------------------------------rJMFF008B18 46 --------------------------------------------->JMFF030G09 <---------------------------------------------------------------------rJMFF030G09 112 ----------------------------------------------->JMFF012D12 <---------------------------------------------------------------------rJMFF012D12 211 --------------------------------------------->JMSF017P05 <---------------------------------------------------------------------------rJMSF017P05
The following clones don't have the opposite end in this pair.