clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF009L13 | Sequence | 571 | 007311 (7) | ref|XP_006650286.1| | 1e-95 | PREDICTED: UDP-arabinopyranose mutase 1-like [Oryza brachyantha] | 633 | 007311 (7) | ref|XP_009758723.1| | 1e-85 | PREDICTED: UDP-arabinopyranose mutase 3 [Nicotiana sylvestris] |
JMFF034D06 | Sequence | 496 | 007311 (7) | ref|XP_006650286.1| | 3e-97 | PREDICTED: UDP-arabinopyranose mutase 1-like [Oryza brachyantha] | 750 | 007311 (7) | ref|XP_009758723.1| | 3e-115 | PREDICTED: UDP-arabinopyranose mutase 3 [Nicotiana sylvestris] |
JMFN006I02 | Sequence | 591 | 007311 (7) | emb|CBI15334.3| | 2e-75 | unnamed protein product [Vitis vinifera] | |||||
JMSF042O22 | Sequence | 803 | 007311 (7) | ref|XP_009590755.1| | 2e-175 | PREDICTED: alpha-1,4-glucan-protein synthase [UDP-forming] 2-like [Nicotiana to | 703 | 007311 (7) | ref|XP_009758723.1| | 2e-108 | PREDICTED: UDP-arabinopyranose mutase 3 [Nicotiana sylvestris] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig007311============================================1445 1 --------------------------------------->JMFF009L13 <-------------------------------------------rJMFF009L13 161 ---------------------------->JMFF034D06 <--------------------------------------------------rJMFF034D06 178 -------------------------------------------------->JMSF042O22 <---------------------------------------------rJMSF042O22
The following clones don't have the opposite end in this pair.
---------------------->JMFN006I02-