| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF009L13 | Sequence | 571 | 007311 (7) | ref|XP_006650286.1| | 1e-95 | PREDICTED: UDP-arabinopyranose mutase 1-like [Oryza brachyantha] | 633 | 007311 (7) | ref|XP_009758723.1| | 1e-85 | PREDICTED: UDP-arabinopyranose mutase 3 [Nicotiana sylvestris] |
| JMFF034D06 | Sequence | 496 | 007311 (7) | ref|XP_006650286.1| | 3e-97 | PREDICTED: UDP-arabinopyranose mutase 1-like [Oryza brachyantha] | 750 | 007311 (7) | ref|XP_009758723.1| | 3e-115 | PREDICTED: UDP-arabinopyranose mutase 3 [Nicotiana sylvestris] |
| JMFN006I02 | Sequence | 591 | 007311 (7) | emb|CBI15334.3| | 2e-75 | unnamed protein product [Vitis vinifera] | |||||
| JMSF042O22 | Sequence | 803 | 007311 (7) | ref|XP_009590755.1| | 2e-175 | PREDICTED: alpha-1,4-glucan-protein synthase [UDP-forming] 2-like [Nicotiana to | 703 | 007311 (7) | ref|XP_009758723.1| | 2e-108 | PREDICTED: UDP-arabinopyranose mutase 3 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMFF009L13- ATGTT
rJMFF034D06- ATGTT
____________________________________________________________
consensus ATGTT
. : . : . : . : . : . :
rJMSF042O22- AATGCATAAATAAATACATATATAGTTTGCAACTCATATAAATCAAA
rJMFF009L13- ATTTATTAAATTAAATGCATAAATAAATACATATATAGTTTGCAACTCATATAAATCAAA
rJMFF034D06- ATTTATTAAATTAAATGCATAAATAAATACATATATAGTTTGCAACTCATATAAATCAAA
____________________________________________________________
consensus ATTTATTAAATTAAATGCATAAATAAATACATATATAGTTTGCAACTCATATAAATCAAA
. : . : . : . : . : . :
rJMSF042O22- CAAAATAAATACGCCGTATATAGGGGGAAAGGAGACGGCAGCCGCCTCCCGCCTCCTGCC
rJMFF009L13- CAAAATAAATACGCCGTATATAGGGGGAAAGGAGACGGCAGCCGCCTCCCGCCTCCTGCC
rJMFF034D06- CAAAATAAATACGCCGTATATAGGGGGAAAGGAGACGGCAGCCGCCTCCCGCCTCCTGCC
____________________________________________________________
consensus CAAAATAAATACGCCGTATATAGGGGGAAAGGAGACGGCAGCCGCCTCCCGCCTCCTGCC
. : . : . : . : . : . :
rJMSF042O22- TCCTCGTCACAATGTAAGCATGGACAAACAAGATGGATGATAGTAGTACAAAAGCCGCCT
rJMFF009L13- TCCTCGTCACAATGTAAGCATGGACAAACAAGATGGATGATAGTAGTACAAAAGCCGCCT
rJMFF034D06- TCCTCGTCACAATGTAAGCATGGACAAACAAGATGGATGATAGTAGTACAAAAGCCGCCT
____________________________________________________________
consensus TCCTCGTCACAATGTAAGCATGGACAAACAAGATGGATGATAGTAGTACAAAAGCCGCCT
. : . : . : . : . : . :
rJMSF042O22- ATGACTGACTATCGATCTAACATGTATGTATGCCTCTACTTAGAGCTGCCATTGGCTACT
rJMFF009L13- ATGACTGACTATCGATCTAACATGTATGTATGCCTCTACTTAGAGCTGCCATTGGCTACT
rJMFF034D06- ATGACTGACTATCGATCTAACATGTATGTATGCCTCTACTTAGAGCTGCCATTGGCTACT
____________________________________________________________
consensus ATGACTGACTATCGATCTAACATGTATGTATGCCTCTACTTAGAGCTGCCATTGGCTACT
. : . : . : . : . : . :
rJMSF042O22- TTTGCTGCTGCGGGGGTGCCAGTTGGGTTCAGTTCATCCCAAGCTTCGATCCAGGTCACC
rJMFF009L13- TTTGCTGCTGCGGGGGTGCCAGTTGGGTTCAGTTCATCCCAAGCTTCGATCCAGGTCACC
JMFN006I02+ TGGGTTCAGCTCGTCCCAAGCTTCGATCCAGGTCACC
rJMFF034D06- TTTGCTGCTGCGGGGGTGCCAGTTGGGTTCAGTTCATCCCAAGCTTCGATCCAGGTCACC
____________________________________________________________
consensus TTTGCTGCTGCGGGGGTGCCAGTTGGGTTCAGTTCATCCCAAGCTTCGATCCAGGTCACC
. : . : . : . : . : . :
rJMSF042O22- ATGGCATCGGCCAGCTTGTTGAAGTACTCGTCCACCTTCCCGAGCTTGGCCTTCACTTGT
rJMFF009L13- ATGGCATCGGCCAGCTTGTTGAAGTACTCGTCCACCTTCCCGAGCTTGGCCTTCACTTGT
JMFN006I02+ ATTGCATCGGCCAGCTTGAGGAAGTACTCGTCAATCTTCCCGAGCTTGGCCTTGACTTGC
rJMFF034D06- ATGGCATCGGCCAGCTTGTTGAAGTACTCGTCCACCTTCCCGAGCTTGGCCTTCACTTGT
____________________________________________________________
consensus ATGGCATCGGCCAGCTTGTTGAAGTACTCGTCCACCTTCCCGAGCTTGGCCTTCACTTGT
. : . : . : . : . : . :
rJMSF042O22- TTGGAGAGTTCAAGGTAGCATTTCTGGACAGTGGTGCAGTCCTTTGGGAGAGTGACAGAC
rJMFF009L13- TTGGAGAGTTCAAGGTAGCATTTCTGGACAGTGGTGCAGTCCTTTGGGAGAGTGACAGAC
JMFN006I02+ TTGGAAATCTCGAGGTAACAGCTCTGGACAGTGGTGCATTCCTTTGGAAGAGTAACAGAC
rJMFF034D06- TTGGAGAGTTCAAGGTAGCATTTCTGGACAGTGGTGCAGTCCTTTGGGAGAGTGACAGAC
____________________________________________________________
consensus TTGGAGAGTTCAAGGTAGCATTTCTGGACAGTGGTGCAGTCCTTTGGGAGAGTGACAGAC
. : . : . : . : . : . :
rJMSF042O22- TGGAAGAATGGGATCAGTTCCTCTTGCCAGTAAATGCCCTTGTATTCCTTCTTGAGGTTC
rJMFF009L13- TGGAAGAATGGGATCAGTTCCTCTTGCCAGTAAATGCCCTTGTATTCCTTCTTGAGGTTC
JMFN006I02+ TGGAAAAATGGGATCAGCTCCTCTTGCCAGTAGATACCCTTGTATTCTTTCTTGAGGTTC
rJMFF034D06- TGGAAGAATGGGATCAGTTCCTCTTGCCAGTAAATGCCCTTGTATTCCTTCTTGAGGTTC
____________________________________________________________
consensus TGGAAGAATGGGATCAGTTCCTCTTGCCAGTAAATGCCCTTGTATTCCTTCTTGAGGTTC
. : . : . : . : . : . :
rJMSF042O22- ACGAACGGATTGCTTGCTTTGCTGTGCCAGATGTAGGGCAGGCCCGTCTTCACTCCCAAT
rJMFF009L13- ACGAACGGATTGCTTGCTTTGCTGTGCCAGATGTAGGGCAGGCCCGTCTTCACTCCCAAT
JMFN006I02+ ACGAAAGGATTGCTCGCTTTGCTGTGCCAGATGTAGGGCAGCCCGGTCTTGACACCCAAT
rJMFF034D06- ACGAACGGATTGCTTGCTTTGCTGTGCCAGATGTAGGGCAGGCCCGTCTTCACTCCCAAT
____________________________________________________________
consensus ACGAACGGATTGCTTGCTTTGCTGTGCCAGATGTAGGGCAGGCCCGTCTTCACTCCCAAT
. : . : . : . : . : . :
rJMSF042O22- CCCAAGTGGTCGCAAATCACCTTGGTACACCACCCCGCCCACATGTCATCATAGCGTCCG
rJMFF009L13- CCCAAGTGGTCGCAAATCACCTTGGTACACCACCCCGCCCACATGTCATCATAGCGTCCG
JMFN006I02+ CCCATGTGGTCGCAGATTACCTTGCAACACCACCCAGCCCACATATCATCGTAGCGTCC
rJMFF034D06- CCCAAGTGGTCGCAAATCACCTTGGTACACCACCCCGCCCACATGTCATCATAGCGTCCG
JMSF042O22+ TCGCAAATCACCTTGGTACACCACCCCGCCCACATGTCATCATAGCGTCCG
____________________________________________________________
consensus CCCAAGTGGTCGCAAATCACCTTGGTACACCACCCCGCCCACATGTCATCATAGCGTCCG
. : . : . : . : . : . :
rJMSF042O22- ATAGGCTGCCCATCACCCATGAGTCCAAAATACATAGCCGGGCCAATGAGTTCACGGTTG
rJMFF009L13- ATAGGCTGCCCATCACCCATGAGTCCAA
rJMFF034D06- ATAGGCTGCCCATCACCCATGAGTCCAAAATACATAGCCGGGCCAATGAGTTCACGGTTG
JMSF042O22+ ATAGGCTGCCCATCACCCATGAGTCCAAAATACATAGCCGGGCCAATGAGTTCACGGTTG
____________________________________________________________
consensus ATAGGCTGCCCATCACCCATGAGTCCAAAATACATAGCCGGGCCAATGAGTTCACGGTTG
. : . : . : . : . : . :
rJMSF042O22- AATCCCAAATTCATACCACACAT
rJMFF034D06- AATCCCAAATTCATACCACACATGGGAAAGAGCGTCCCCTTTGGTATTGTCATAATCGTA
JMSF042O22+ AATCCCAAATTCATACCACACATGGGAAAGAGCGTCCCCTTTGGTATTGTCATAATCGTA
____________________________________________________________
consensus AATCCCAAATTCATACCACACATGGGAAAGAGCGTCCCCTTTGGTATTGTCATAATCGTA
. : . : . : . : . : . :
rJMFF034D06- TCAACATACCTAGTGTTCC
JMSF042O22+ TCAACATACCTAGTGTTCCGTTCAAGAGGCTTGACAAGCTGGGTGGGCGCATAATAATCA
____________________________________________________________
consensus TCAACATACCTAGTGTTCCGTTCAAGAGGCTTGACAAGCTGGGTGGGCGCATAATAATCA
. : . : . : . : . : . :
JMSF042O22+ GGGATGTTAAGCCAGAGGCCATGCGAAACAGCGGTGGGTACCCCTTCGCGGAGACTGAAA
____________________________________________________________
consensus GGGATGTTAAGCCAGAGGCCATGCGAAACAGCGGTGGGTACCCCTTCGCGGAGACTGAAA
. : . : . : . : . : . :
JMSF042O22+ GGGTACCCACGGACAAAATCTGCACCTTCTCGGTATGGATCATACAATGTGTTGAAGAAA
JMFF034D06+ CACCTTCTCGGTATGGATCATACAATGTGTTGAAGAAA
JMFF009L13+ TCGGTATGGATCATACAATGTGTTGAAGAAA
____________________________________________________________
consensus GGGTACCCACGGACAAAATCTGCACCTTCTCGGTATGGATCATACAATGTGTTGAAGAAA
. : . : . : . : . : . :
JMSF042O22+ AACGGTGTTGATGGGGACAAGAGGTTCTTGATGTGCTGCTCTAGTGCATTAATGTCTTTG
JMFF034D06+ AACGGTGTTGATGGGGACAAGAGGTTCTTGATGTGCTGCTCTAGTGCATTAATGTCTTTG
JMFF009L13+ AACGGTGTTGATGGGGACAAGAGGTTCTTGATGTGCTGCTCTAGTGCATTAATGTCTTTG
____________________________________________________________
consensus AACGGTGTTGATGGGGACAAGAGGTTCTTGATGTGCTGCTCTAGTGCATTAATGTCTTTG
. : . : . : . : . : . :
JMSF042O22+ CCAGATGGATCTTTGGCAACAAAGCAGTCATCATCAATAGTGTAGATGTACTTCTTCTTG
JMFF034D06+ CCAGATGGATCTTTGGCAACAAAGCAGTCATCATCAATAGTGTAGATGTACTTCTTCTTG
JMFF009L13+ CCAGATGGATCTTTGGCAACAAAGCAGTCATCATCAATAGTGTAGATGTACTTCTTCTTG
____________________________________________________________
consensus CCAGATGGATCTTTGGCAACAAAGCAGTCATCATCAATAGTGTAGATGTACTTCTTCTTG
. : . : . : . : . : . :
JMSF042O22+ GAGACCATGTAGCCGAAGCAACGGCAGGCGGAGTCCTTGAAGGAAATGCAGGAAGCTTTG
JMFF034D06+ GAGACCATGTAGCCGAAGCAACGGCAGGCGGAGTCCTTGAAGGAAATGCAGGAAGCTTTG
JMFF009L13+ GAGACCATGTAGCCGAAGCAACGGCAGGCGGAGTCCTTGAAGGAAATGCAGGAAGCTTTG
____________________________________________________________
consensus GAGACCATGTAGCCGAAGCAACGGCAGGCGGAGTCCTTGAAGGAAATGCAGGAAGCTTTG
. : . : . : . : . : . :
JMSF042O22+ GGACCCAGAATGCGGTTGATATCGTTGCGGTTGTAGAGCTCATAGTCGAAGCCATCGGGC
JMFF034D06+ GGACCCAGAATGCGGTTGATATCGTTGCGGTTGTAGAGCTCATAGTCGAAGCCATCGGGC
JMFF009L13+ GGACCCAGAATGCGGTTGATATCGTTGCGGTTGTAGAGCTCATAGTCGAAGCCATCGGGC
____________________________________________________________
consensus GGACCCAGAATGCGGTTGATATCGTTGCGGTTGTAGAGCTCATAGTCGAAGCCATCGGGC
. : . : . : . : . : . :
JMSF042O22+ ACGCGGATGGTCTTTGAAGGGTCGCCGTCTTGAACTATGATCAGATGGTAGGGCTGGAAG
JMFF034D06+ ACGCGGATGGTCTTTGAAGGGTCGCCGTCTTGAACTATGATCAGATGGTAGGGCTGGAAG
JMFF009L13+ ACGCGGATGGTCTTTGAAGGGTCGCCGTCTTGAACTATGATCAGATGGTAGGGCTGGAAG
____________________________________________________________
consensus ACGCGGATGGTCTTTGAAGGGTCGCCGTCTTGAACTATGATCAGATGGTAGGGCTGGAAG
. : . : . : . : . : . :
JMSF042O22+ AAGGGCCTCCATTGCTCCAAGAAGTCGAGATTTCGGATCGTGGGGATCACGATATCCAGC
JMFF034D06+ AAGGGCCTCCATTGCTCCAAGAAGTCGAGATTTCGGATCGTGGGGATCACGATATCCAGC
JMFF009L13+ AAGGGCCTCCATTGCTCCAAGAAGTCGAGATTTCGGATCGTGGGGATCACGATATCCAGC
____________________________________________________________
consensus AAGGGCCTCCATTGCTCCAAGAAGTCGAGATTTCGGATCGTGGGGATCACGATATCCAGC
. : . : . : . : . : . :
JMSF042O22+ TCGTCTTTCAGCAAAGGGGT
JMFF034D06+ TCGTCTTTCAGCAAAGGGGT
JMFF009L13+ TCGTCTTTCAGCAAAGGGGTAGCGGGAACTGAGGAACTTGGATTCGCCATTGCGGGGTTG
____________________________________________________________
consensus TCGTCTTTCAGCAAAGGGGTAGCGGGAACTGAGGAACTTGGATTCGCCATTGCGGGGTTG
. : . : . : . : . : . :
JMFF009L13+ AAATTGAATTGAAGAATTGAAGAAGAGAGGTGGAGAATGGAGATCCGATGCAAGGCGGAG
____________________________________________________________
consensus AAATTGAATTGAAGAATTGAAGAAGAGAGGTGGAGAATGGAGATCCGATGCAAGGCGGAG
. : . : . : . : . : . :
JMFF009L13+ TTTGAATATATAGAGGAGACTGAACTCCTGAAGAGAGCCAAGAATCTCCTCCTCATTTTC
____________________________________________________________
consensus TTTGAATATATAGAGGAGACTGAACTCCTGAAGAGAGCCAAGAATCTCCTCCTCATTTTC