clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF014D02 | Sequence | 535 | 003981 (6) | ref|XP_006384760.1| | 1e-23 | harpin-induced family protein [Populus trichocarpa] gb|ERP62557.1| harpin-induce | 700 | 003981 (6) | ref|NP_001275943.1| | 3e-61 | uncharacterized protein LOC102589097 [Solanum tuberosum] ref|XP_006364492.1| PRE |
JMFF019H20 | Sequence | 563 | 003981 (6) | ref|XP_006384760.1| | 2e-30 | harpin-induced family protein [Populus trichocarpa] gb|ERP62557.1| harpin-induce | 733 | 003981 (6) | ref|XP_009779546.1| | 1e-70 | PREDICTED: protein YLS9 [Nicotiana sylvestris] |
JMFF023E18 | Sequence | 487 | 003981 (6) | ref|XP_006384760.1| | 3e-15 | harpin-induced family protein [Populus trichocarpa] gb|ERP62557.1| harpin-induce | 742 | 003981 (6) | ref|XP_009779546.1| | 3e-67 | PREDICTED: protein YLS9 [Nicotiana sylvestris] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig003981============================================1151 1 ---------------------------------------------->JMFF014D02 <------------------------------------------------------------rJMFF014D02 233 ------------------------------------------------>JMFF019H20 <---------------------------------------------------------------rJMFF019H20 268 ----------------------------------------->JMFF023E18 <---------------------------------------------------------------rJMFF023E18
The following clones don't have the opposite end in this pair.