clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF011P17 | Sequence | 416 | 001674 (10) | ref|XP_009758123.1| | 2e-19 | PREDICTED: transmembrane emp24 domain-containing protein p24delta7 [Nicotiana s | 731 | 001674 (10) | ref|XP_009767548.1| | 7e-84 | PREDICTED: transmembrane emp24 domain-containing protein p24delta9-like [Nicoti |
JMFF017C08 | Sequence | 137 | 001674 (10) | 721 | 001674 (10) | ref|XP_009767548.1| | 6e-83 | PREDICTED: transmembrane emp24 domain-containing protein p24delta9-like [Nicoti | |||
JMFF018G07 | Sequence | 135 | 001674 (10) | 716 | 001674 (10) | ref|XP_009767548.1| | 2e-83 | PREDICTED: transmembrane emp24 domain-containing protein p24delta9-like [Nicoti | |||
JMFF023D13 | Sequence | 292 | 001674 (10) | 675 | 001674 (10) | ref|XP_009767548.1| | 1e-82 | PREDICTED: transmembrane emp24 domain-containing protein p24delta9-like [Nicoti | |||
JMFN038L08 | Sequence | 441 | 001674 (10) | ref|XP_006292548.1| | 9e-09 | hypothetical protein CARUB_v10018783mg [Capsella rubella] gb|EOA25446.1| hypothe | |||||
JMFS102H09 | Sequence | 627 | 001674 (10) | ref|XP_009767548.1| | 1e-83 | PREDICTED: transmembrane emp24 domain-containing protein p24delta9-like [Nicoti |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig001674============================================1113 197 ----------->JMFF017C08 <-------------------------------------------------------------rJMFF017C08 197 ----------->JMFF018G07 <--------------------------------------------------------------rJMFF018G07 197 ------------------------------------>JMFF011P17 <--------------------------------------------------------------rJMFF011P17 221 ------------------------->JMFF023D13 <------------------------------------------------------------rJMFF023D13
The following clones don't have the opposite end in this pair.
----------------------------------------------------->JMFS102H09- --------------------------------------->JMFN038L08-