clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMSF011C15 | Sequence | 232 | 012577 (8) | ref|XP_006434777.1| | 3e-07 | hypothetical protein CICLE_v10002178mg [Citrus clementina] gb|ESR48017.1| hypoth | 743 | 012577 (8) | emb|CDP01357.1| | 2e-125 | unnamed protein product [Coffea canephora] |
JMSF012N05 | Sequence | 506 | 012577 (8) | gb|EYU25420.1| | 5e-62 | hypothetical protein MIMGU_mgv1a011943mg [Erythranthe guttata] | 766 | 012577 (8) | emb|CDP01357.1| | 1e-123 | unnamed protein product [Coffea canephora] |
JMSF017F16 | Sequence | 528 | 012577 (8) | gb|EYU25420.1| | 8e-77 | hypothetical protein MIMGU_mgv1a011943mg [Erythranthe guttata] | 734 | 012577 (8) | emb|CDP01357.1| | 2e-100 | unnamed protein product [Coffea canephora] |
JMSF044J15 | Sequence | 759 | 012577 (8) | ref|XP_006434778.1| | 1e-112 | hypothetical protein CICLE_v10002178mg [Citrus clementina] ref|XP_006434779.1| h | 746 | 012577 (8) | emb|CDP01357.1| | 8e-125 | unnamed protein product [Coffea canephora] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig012577============================================1022 4 --------------------------------------------------->JMSF017F16 <-----------------------------------------------------------------------rJMSF017F16 95 ------------------------------------------------------------------------->JMSF044J15 <------------------------------------------------------------------------rJMSF044J15 98 ------------------------------------------------>JMSF012N05 <--------------------------------------------------------------------------rJMSF012N05 120 ---------------------->JMSF011C15 <------------------------------------------------------------------------rJMSF011C15
The following clones don't have the opposite end in this pair.