| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF011C15 | Sequence | 232 | 012577 (8) | ref|XP_006434777.1| | 3e-07 | hypothetical protein CICLE_v10002178mg [Citrus clementina] gb|ESR48017.1| hypoth | 743 | 012577 (8) | emb|CDP01357.1| | 2e-125 | unnamed protein product [Coffea canephora] |
| JMSF012N05 | Sequence | 506 | 012577 (8) | gb|EYU25420.1| | 5e-62 | hypothetical protein MIMGU_mgv1a011943mg [Erythranthe guttata] | 766 | 012577 (8) | emb|CDP01357.1| | 1e-123 | unnamed protein product [Coffea canephora] |
| JMSF017F16 | Sequence | 528 | 012577 (8) | gb|EYU25420.1| | 8e-77 | hypothetical protein MIMGU_mgv1a011943mg [Erythranthe guttata] | 734 | 012577 (8) | emb|CDP01357.1| | 2e-100 | unnamed protein product [Coffea canephora] |
| JMSF044J15 | Sequence | 759 | 012577 (8) | ref|XP_006434778.1| | 1e-112 | hypothetical protein CICLE_v10002178mg [Citrus clementina] ref|XP_006434779.1| h | 746 | 012577 (8) | emb|CDP01357.1| | 8e-125 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMSF044J15- GG
____________________________________________________________
consensus GG
. : . : . : . : . : . :
JMSF017F16- ATGGTTGTTTAGCTTGCTGGAAGTTAACGTACAACACGATCGAGATGGAACTTGCATT
JMSF012N05- ATGGTTGTTTAGCTTGCTGGAAGTTAACGTACAACACGATCGAGATGGAACTTGCATT
JMSF011C15- ATGGTTGTTTAGCTTGCTGGAAGTTAACGTACAACACGATCGAGATGGAACTTGCATT
JMSF044J15- TCATGGTTGTTTAGCTTGCTGGAAGTTAACGTACAACACGATCGAGATGGAACTTGCATT
____________________________________________________________
consensus TCATGGTTGTTTAGCTTGCTGGAAGTTAACGTACAACACGATCGAGATGGAACTTGCATT
. : . : . : . : . : . :
JMSF017F16- GGGAAGAAGCTTCCGAGCTTTGCCCACCTTCCCTGCGTCACCTGCATTTCCGTCCAACGG
JMSF012N05- GGGAAGAAGCTTCCGAGCTTTGCCCACCTTCCCTGCGTCACCTGCATTTCCGTCCAACGG
JMSF011C15- GGGAAGAAGCTTCCGAGCTTTGCCCACCTTCCCTGCGTCACCTGCATTTCCGTCCAACGG
JMSF044J15- GGGAAGAAGCTTCCGAGCTTTGCCCACCTTCCCTGCGTCACCTGCATTTCCGTCCAACGG
____________________________________________________________
consensus GGGAAGAAGCTTCCGAGCTTTGCCCACCTTCCCTGCGTCACCTGCATTTCCGTCCAACGG
. : . : . : . : . : . :
JMSF017F16- GATAGGAAAAACATCACCCGTAAAAACCGCACCTTATTGTCCGCGGAAATGTCGGAATCC
JMSF012N05- GATAGGAAAAACATCACCCGTAAAAACCGCACCTTATTGTCCGCGGAAATGTCGGAATCC
JMSF011C15- GATAGGAAAAACATCACCCGTAAAAACCGCACCTTATTGTCCGCGGAAATGTCGGAATCC
JMSF044J15- GATAGGAAAAACATCACCCGTAAAAACCGCACCTTATTGTCCGCGGAAATGTCGGAATCC
rJMSF011C15+ CGCGGAAATGTCGGAATCC
rJMSF012N05+ CGCGGAAATGTCGGAATCC
____________________________________________________________
consensus GATAGGAAAAACATCACCCGTAAAAACCGCACCTTATTGTCCGCGGAAATGTCGGAATCC
. : . : . : . : . : . :
JMSF017F16- TGTTGTTCGAGCTCAGCAGCGCCCTACCTGGCTGCCGGGGCTCGACCCTCCGACTTATCT
JMSF012N05- TGTTGTTCGAGCTCAGCAGCGCCCTACCTGGCTGCCGGGGCTCGACCCTCCGACTTATCT
JMSF011C15- TGTTGTTCGAGCTCAGCAGCGCCCTACCTGGCTGCCGGGGCTCGACCCTCCGA
JMSF044J15- TGTTGTTCGAGCTCAGCAGCGCCCTACCTGGCTGCCGGGGCTCGACCCTCCGACTTATCT
rJMSF011C15+ TGTTGTTCGAGCTCAGCAGCGCCCTACCTGGCTGCCGGGGCTCGACCCTCCGACTTATCT
rJMSF044J15+ TGTTCGAGCTCAGCAGCGCCCTACCTGGCTGCCGGGGCTCGACCCTCCGACTTATCT
rJMSF012N05+ TGTTGNTCGAGCTCAGCAGCGCCCTACCTGGCTGCCGGGGCTCGACCNTCCGACTTATCT
____________________________________________________________
consensus TGTTGTTCGAGCTCAGCAGCGCCCTACCTGGCTGCCGGGGCTCGACCCTCCGACTTATCT
. : . : . : . : . : . :
JMSF017F16- TGACGGAACTCTTGCTGGGGATTTCGGGTTTGATCCTCTTGGACTTGGAGAGGATCCGGA
JMSF012N05- TGACGGAACTCTTGCTGGGGATTTCGGGTTTGATCCTCTTGGACTTGGAGAGGATCCGGA
JMSF044J15- TGACGGAACTCTTGCTGGGGATTTCGGGTTTGATCCTCTTGGACTTGGAGAGGATCCGGA
rJMSF011C15+ TGACGGAACTCTTGCTGGGGATTTCGGGTTTGATCCTCTTGGACTTGGAGAGGATCCGGA
rJMSF044J15+ TGACGGAACTCTTGCTGGGGATTTCGGGTTTGATCCTCTTGGACTTGGAGAGGATCCGGA
rJMSF012N05+ TGACGGAACTCTTGCTGGGGATTTCGGGTTTGATCCTCTTGGACTTGGAGAGGATCCGGA
rJMSF017F16+ GGAGAGGATCCGGA
____________________________________________________________
consensus TGACGGAACTCTTGCTGGGGATTTCGGGTTTGATCCTCTTGGACTTGGAGAGGATCCGGA
. : . : . : . : . : . :
JMSF017F16- GAGCTTGAGATGGTATGTGCAAGCAGAGCTGGTTCATGCCCGTTTCGCCATGGCTGGGGT
JMSF012N05- GAGCTTGAGATGGTATGTGCAAGCAGAGCTGGTTCATGCCCGTTTCGCCATGGCTGGGGT
JMSF044J15- GAGCTTGAGATGGTATGTGCAAGCAGAGCTGGTTCATGCCCGTTTCGCCATGGCTGGGGT
rJMSF011C15+ GAGCTTGAGATGGTATGTGCAAGCAGAGCTGGTTCATGCCCGTTTCGCCATGGCTGGGGT
rJMSF044J15+ GAGCTTGAGATGGTATGTGCAAGCAGAGCTGGTTCATGCCCGTTTCGCCATGGCTGGGGT
rJMSF012N05+ GAGCTTGAGATGGTATGTGCAAGCAGAGCTGGTTCATGCCCGTTTCGCCATGGCTGGGGT
rJMSF017F16+ GAGCTTGAGATGGTATGTGCAAGCAGAGCTGGTTCATGCCCGTTTCGCCATGGCTGGGGT
____________________________________________________________
consensus GAGCTTGAGATGGTATGTGCAAGCAGAGCTGGTTCATGCCCGTTTCGCCATGGCTGGGGT
. : . : . : . : . : . :
JMSF017F16- TGCCGGAATTCTTTTTACAGATTTGCTTCGTGTGACAGGAATAAAAGACCTGCCTGTGTG
JMSF012N05- TGCCGGAATTCTTTTTACAGATTTGCTTCGTGTGACAGGAATAAAAGACCTGCCTGTGTG
JMSF044J15- TGCCGGAATTCTTTTTACAGATTTGCTTCGTGTGACAGGAATAAAAGACCTGCCTGTGTG
rJMSF011C15+ TGCCGGAATTCTTTTTACAGATTTGCTTCGTGTGACAGGAATAAAAGACCTGCCTGTGTG
rJMSF044J15+ TGCCGGAATTCTTTTTACAGATTTGCTTCGTGTGACAGGAATAAAAGACCTGCCTGTGTG
rJMSF012N05+ TGCCGGAATTCTTTTTACAGATTTGCTTCGTGTGACAGGAATAAAAGACCTGCCTGTGTG
rJMSF017F16+ TGCCGGAATTCTTTTTACAGATTTGCTTCGTGTGACAGGAATAAAAGACCTGCCTGTGTG
____________________________________________________________
consensus TGCCGGAATTCTTTTTACAGATTTGCTTCGTGTGACAGGAATAAAAGACCTGCCTGTGTG
. : . : . : . : . : . :
JMSF017F16- GTATGAAGCAGGAGCAACAAAATTTGAGTTTGCCAGTACAAGAACTCTGATTGTTGTTCA
JMSF012N05- GTATGAAGCAGGAGCAACAAAATTTGAGTTTGCCAGTACAAGAACTCTGATTGTTGTTCA
JMSF044J15- GTATGAAGCAGGAGCAACAAAATTTGAGTTTGCCAGTACAAGAACTCTGATTGTTGTTCA
rJMSF011C15+ GTATGAAGCAGGAGCAACAAAATTTGAGTTTGCCAGTACAAGAACTCTGATTGTTGTTCA
rJMSF044J15+ GTATGAAGCAGGAGCAACAAAATTTGAGTTTGCCAGTACAAGAACTCTGATTGTTGTTCA
rJMSF012N05+ GTATGAAGCAGGAGCAACAAAATTTGAGTTTGCCAGTACAAGAACTCTGATTGTTGTTCA
rJMSF017F16+ GTATGAAGCAGGAGCAACAAAATTTGAGTTTGCCAGTACAAGAACTCTGATTGTTGTTCA
____________________________________________________________
consensus GTATGAAGCAGGAGCAACAAAATTTGAGTTTGCCAGTACAAGAACTCTGATTGTTGTTCA
. : . : . : . : . : . :
JMSF017F16- GCTCTTACTGATGGGTTTTGCTGAAACCAAAAGGTATATGGATTTCAAA
JMSF012N05- GCTCTTACTGATGGGTTT
JMSF044J15- GCTCTTACTGATGGGTTTTGCTGAAACCAAAAGGTATATGGATTTCAAAAACCCTGGTTC
rJMSF011C15+ GCTCTTACTGATGGGTTTTGCTGAAACCAAAAGGTATATGGATTTCAAAAACCCTGGTTC
rJMSF044J15+ GCTCTTACTGATGGGTTTTGCTGAAACCAAAAGGTATATGGATTTCAAAAACCCTGGTTC
rJMSF012N05+ GCTCTTACTGATGGGTTTTGCTGAAACCAAAAGGTATATGGATTTCAAAAACCCTGGTTC
rJMSF017F16+ GCTCTTACTGATGGGTTTTGCTGAAACCAAAAGGTATATGGATTTCAAAAACCCTGGTTC
____________________________________________________________
consensus GCTCTTACTGATGGGTTTTGCTGAAACCAAAAGGTATATGGATTTCAAAAACCCTGGTTC
. : . : . : . : . : . :
JMSF044J15- TCAAGCACAAGAAGGAACCTTCCTCAATATAGAAGCTGCACTTGAAGGCCTTGAACCCGG
rJMSF011C15+ TCAAGCACAAGAAGGAACCTTCCTCAATATAGAAGCTGCACTTGAAGGCCTTGAACCCGG
rJMSF044J15+ TCAAGCACAAGAAGGAACCTTCCTCAATATAGAAGCTGCACTTGAAGGCCTTGAACCCGG
rJMSF012N05+ TCAAGCACAAGAAGGAACCTTCCTCAATATAGAAGCTGCACTTGAAGGCCTTGAACCCGG
rJMSF017F16+ TCAAGCACAAGAAGGAACCTTCCTCAATATAGAAGCTGCACTTGAAGGCCTTGAACCCGG
____________________________________________________________
consensus TCAAGCACAAGAAGGAACCTTCCTCAATATAGAAGCTGCACTTGAAGGCCTTGAACCCGG
. : . : . : . : . : . :
JMSF044J15- GTATCCTGGTGGCCCCTTGTTCAATCCATTGGGTCTGGCTAAAGATATCAAGAATGCCCA
rJMSF011C15+ GTATCCTGGTGGCCCCTTGTTCAATCCATTGGGTCTGGCTAAAGATATCAAGAATGCCCA
rJMSF044J15+ GTATCCTGGTGGCCCCTTGTTCAATCCATTGGGTCTGGCTAAAGATATCAAGAATGCCCA
rJMSF012N05+ GTATCCTGGTGGCCCCTTGTTCAATCCATTGGGTCTGGCTAAAGATATCAAGAATGCCCA
rJMSF017F16+ GTATCCTGGTGGCCCCTTGTTCAATCCATTGGGTCTGGCTAAAGATATCAAGAATGCCCA
____________________________________________________________
consensus GTATCCTGGTGGCCCCTTGTTCAATCCATTGGGTCTGGCTAAAGATATCAAGAATGCCCA
. : . : . : . : . : . :
JMSF044J15- AGAATGGAAGCTCAAAGAGATCAAGAATGGAAGGCTAGCAATGGTGGCCATGCTCGGCTT
rJMSF011C15+ AGAATGGAAGCTCAAAGAGATCAAGAATGGAAGGCTAGCAATGGTGGCCATGCTCGGCTT
rJMSF044J15+ AGAATGGAAGCTCAAAGAGATCAAGAATGGAAGGCTAGCAATGGTGGCCATGCTCGGCTT
rJMSF012N05+ AGAATGGAAGCTCAAAGAGATCAAGAATGGAAGGCTAGCAATGGTGGCCATGCTCGGCTT
rJMSF017F16+ AGAATGGAAGCTCAAAGAGATCAAGAATGGAAGGCTAGCAATGGTGGCCATGCTCGGCTT
____________________________________________________________
consensus AGAATGGAAGCTCAAAGAGATCAAGAATGGAAGGCTAGCAATGGTGGCCATGCTCGGCTT
. : . : . : . : . : . :
JMSF044J15- CTTCGTCCAGGCTTCTGTTACTCATGCTGGCCCTATA
rJMSF011C15+ CTTCGTCCAGGCTTCTGTTACTCATGCTGGCCCTATAGAAAATCTTGCCCAGCACCTCTC
rJMSF044J15+ CTTCGTCCAGGCTTCTGTTACTCATGCTGGCCCTATAGAAAATCTTGCCCAGCACCTCTC
rJMSF012N05+ CTTCGTCCAGGCTTCTGTTACTCATGCTGGCCCTATAGAAAATCTTGCCCAGCACCTCTC
rJMSF017F16+ CTTCGTCCAGGCTTCTGTTACTCATGCTGGCCCTATAGAAAATCTTGCCCAGCACCTCTC
____________________________________________________________
consensus CTTCGTCCAGGCTTCTGTTACTCATGCTGGCCCTATAGAAAATCTTGCCCAGCACCTCTC
. : . : . : . : . : . :
rJMSF011C15+ AGATCCATGGCACAAAACCATCATTCAAACTCTTGCTGGATCTGGTTCTTGATTTTCTGG
rJMSF044J15+ AGATCCATGGCACAAAACCATCATTCAAACTCTTGCTGGATCTGGTTCTTGATTTTCTGG
rJMSF012N05+ AGATCCATGGCACAAAACCATCATTCAAACTCTTGCTGGATCTGGTTCTTGATTTTCTGG
rJMSF017F16+ AGATCCATGGCACAAAACCATCATTCAAACTCTTGCTGGATCTGGTTCTTGATTTTCTGG
____________________________________________________________
consensus AGATCCATGGCACAAAACCATCATTCAAACTCTTGCTGGATCTGGTTCTTGATTTTCTGG
. : . : . : . : . : . :
rJMSF011C15+ AGAGTTAAGTCACAACATTCTGATATGTATATGGTGATACAAGAACAAGATGAAGGATTG
rJMSF044J15+ AGAGTTAAGTCACAACATTCTGATATGTATATGGTGATACAAGAACAAGATGAAGGATTG
rJMSF012N05+ AGAGTTAAGTCACAACATTCTGATATGTATATGGTGATACAAGAACAAGATGAAGGATTG
rJMSF017F16+ AGAGTTAAGTCACAACATTCTGATATGTATATGGTGATACAAGAACAAGATGAAGGATTG
____________________________________________________________
consensus AGAGTTAAGTCACAACATTCTGATATGTATATGGTGATACAAGAACAAGATGAAGGATTG
. : . : . : . : . : . :
rJMSF011C15+ CATA
rJMSF044J15+ CATATAATCCTTCTTGTTTTACTCAA
rJMSF012N05+ CATATAATCCTTCTTGTTTTACTCAA
rJMSF017F16+ CATATAATCCTTCTTGTTTTACTCAATACATTGCCAATTTAATAAAGAAATTTATGAGAC
____________________________________________________________
consensus CATATAATCCTTCTTGTTTTACTCAATACATTGCCAATTTAATAAAGAAATTTATGAGAC
. : . : . : . : . : . :
rJMSF017F16+ AGTATAGGAAATGTAACCATCTCTTGTATAAATCATAGCCATGTCTATACAAACAAAAAT
____________________________________________________________
consensus AGTATAGGAAATGTAACCATCTCTTGTATAAATCATAGCCATGTCTATACAAACAAAAAT