clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF002E11 | Sequence | 282 | 003186 (10) | 742 | 003186 (10) | ref|XP_009778654.1| | 5e-126 | PREDICTED: malate dehydrogenase, chloroplastic isoform X2 [Nicotiana sylvestris | |||
JMFF023C12 | Sequence | 455 | 003186 (10) | ref|XP_006364593.1| | 3e-15 | PREDICTED: malate dehydrogenase, chloroplastic-like [Solanum tuberosum] | |||||
JMFF027D21 | Sequence | 618 | 003186 (10) | ref|XP_006364593.1| | 4e-49 | PREDICTED: malate dehydrogenase, chloroplastic-like [Solanum tuberosum] | 741 | 003186 (10) | ref|XP_009778654.1| | 1e-127 | PREDICTED: malate dehydrogenase, chloroplastic isoform X2 [Nicotiana sylvestris |
JMFN039B19 | Sequence | 622 | 003186 (10) | ref|XP_009778654.1| | 2e-138 | PREDICTED: malate dehydrogenase, chloroplastic isoform X2 [Nicotiana sylvestris | |||||
JMSF031I15 | Sequence | 664 | 003186 (10) | ref|XP_006364593.1| | 4e-90 | PREDICTED: malate dehydrogenase, chloroplastic-like [Solanum tuberosum] | 769 | 003186 (10) | ref|XP_009778654.1| | 1e-123 | PREDICTED: malate dehydrogenase, chloroplastic isoform X2 [Nicotiana sylvestris |
JMSF042E23 | Sequence | 778 | 003186 (10) | ref|XP_006364593.1| | 8e-119 | PREDICTED: malate dehydrogenase, chloroplastic-like [Solanum tuberosum] | 748 | 003186 (10) | ref|XP_009778654.1| | 2e-114 | PREDICTED: malate dehydrogenase, chloroplastic isoform X2 [Nicotiana sylvestris |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig003186============================================1657 37 ------------------------------------>JMFF027D21 <--------------------------------------------rJMFF027D21 109 ---------------->JMFF002E11 <-------------------------------------------rJMFF002E11 116 --------------------------------------->JMSF031I15 <----------------------------------------------rJMSF031I15 138 ---------------------------------------------->JMSF042E23 <--------------------------------------------rJMSF042E23
The following clones don't have the opposite end in this pair.
-------------------------->JMFF023C12- ------------------------------------->JMFN039B19-