| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMSF006D15 | Sequence | 383 | 002890 (7) | ref|XP_002273793.1| | 2e-32 | PREDICTED: protoporphyrinogen oxidase 1, chloroplastic [Vitis vinifera] emb|CBI | |||||
| JMSF022I21 | Sequence | 681 | 002890 (7) | ref|XP_009763745.1| | 1e-72 | PREDICTED: protoporphyrinogen oxidase, chloroplastic isoform X2 [Nicotiana sylv | 763 | 002890 (7) | dbj|BAA34713.1| | 1e-115 | plastidal protoporphyrinogen oxidase [Nicotiana tabacum] |
| JMSF025J21 | Sequence | 668 | 002890 (7) | ref|XP_009763745.1| | 1e-76 | PREDICTED: protoporphyrinogen oxidase, chloroplastic isoform X2 [Nicotiana sylv | 767 | 002890 (7) | emb|CDP17037.1| | 8e-85 | unnamed protein product [Coffea canephora] |
| JMSF028K05 | Sequence | 660 | 002890 (7) | ref|XP_009763745.1| | 3e-126 | PREDICTED: protoporphyrinogen oxidase, chloroplastic isoform X2 [Nicotiana sylv | 688 | 002890 (7) | dbj|BAA34713.1| | 4e-65 | plastidal protoporphyrinogen oxidase [Nicotiana tabacum] |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig002890============================================1916 94 ----------------------------------->JMSF022I21 <---------------------------------------rJMSF022I21 132 --------------------------------->JMSF025J21 <---------------------------------------rJMSF025J21 591 --------------------------------->JMSF028K05 <-----------------------------------rJMSF028K05
The following clones don't have the opposite end in this pair.
<-------------------rJMSF006D15-