clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF018A12 | Sequence | 776 | 001093 (8) | ref|XP_009606082.1| | 2e-37 | PREDICTED: small ubiquitin-related modifier 2 [Nicotiana tomentosiformis] | 925 | 001093 (8) | ref|XP_010241411.1| | 9e-26 | PREDICTED: ubiquitin-like protein pmt3/smt3 isoform X1 [Nelumbo nucifera] |
JMFF044A19 | Sequence | 637 | 001093 (8) | ref|XP_009606082.1| | 3e-38 | PREDICTED: small ubiquitin-related modifier 2 [Nicotiana tomentosiformis] | 620 | 001093 (8) | ref|XP_003552121.1| | 2e-22 | PREDICTED: small ubiquitin-related modifier 2-like [Glycine max] gb|KHN10571.1| |
JMFS056E04 | Sequence | 634 | 001093 (8) | ref|XP_010241411.1| | 1e-40 | PREDICTED: ubiquitin-like protein pmt3/smt3 isoform X1 [Nelumbo nucifera] | |||||
JMFS088C12 | Sequence | 634 | 001093 (8) | ref|XP_010241411.1| | 2e-40 | PREDICTED: ubiquitin-like protein pmt3/smt3 isoform X1 [Nelumbo nucifera] | |||||
JMSF008A09 | Sequence | 191 | 001093 (8) | ref|XP_009606082.1| | 2e-11 | PREDICTED: small ubiquitin-related modifier 2 [Nicotiana tomentosiformis] | 829 | 001093 (8) | ref|XP_008230020.1| | 1e-26 | PREDICTED: small ubiquitin-related modifier 1-like [Prunus mume] ref|XP_00823002 |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig001093============================================ 945 57 ---------------------------------------------------------------->JMFF044A19 <-----------------------------------------------------------------rJMFF044A19 75 ---------------------------------------------------------------->JMFF018A12 <-------------------------------------------------------------------------------------------------rJMFF018A12 421 ------------------>JMSF008A09 <--------------------------------------------------------------------------------rJMSF008A09
The following clones don't have the opposite end in this pair.
--------------------------------------------------------------->JMFS088C12- ------------------------------------------------------------->JMFS056E04-