clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMSF001E04 | Sequence | 341 | 008421 (10) | ref|XP_009797881.1| | 100 | PREDICTED: uncharacterized protein LOC104244208 [Nicotiana sylvestris] | 771 | 008421 (10) | ref|XP_010062102.1| | 325 | PREDICTED: uncharacterized protein LOC104449587 [Eucalyptus grandis] gb|KCW69161 |
JMSF002K17 | Sequence | 419 | 008421 (10) | ref|XP_009797881.1| | 97.4 | PREDICTED: uncharacterized protein LOC104244208 [Nicotiana sylvestris] | 726 | 008421 (10) | ref|XP_010062102.1| | 315 | PREDICTED: uncharacterized protein LOC104449587 [Eucalyptus grandis] gb|KCW69161 |
JMSF018G12 | Sequence | 537 | 008421 (10) | ref|XP_009797881.1| | 236 | PREDICTED: uncharacterized protein LOC104244208 [Nicotiana sylvestris] | 739 | 008421 (10) | ref|XP_010062102.1| | 325 | PREDICTED: uncharacterized protein LOC104449587 [Eucalyptus grandis] gb|KCW69161 |
JMSF025P21 | Sequence | 675 | 008421 (10) | ref|XP_009797881.1| | 298 | PREDICTED: uncharacterized protein LOC104244208 [Nicotiana sylvestris] | 773 | 008421 (10) | ref|XP_010062102.1| | 327 | PREDICTED: uncharacterized protein LOC104449587 [Eucalyptus grandis] gb|KCW69161 |
JMSF044L08 | Sequence | 754 | 008421 (10) | ref|XP_009797881.1| | 347 | PREDICTED: uncharacterized protein LOC104244208 [Nicotiana sylvestris] | 716 | 008421 (10) | ref|XP_010062102.1| | 306 | PREDICTED: uncharacterized protein LOC104449587 [Eucalyptus grandis] gb|KCW69161 |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig008421============================================1140 1 ------------------------------------>JMSF002K17 <---------------------------------------------------------------rJMSF002K17 33 ----------------------------------------------------------------->JMSF044L08 <--------------------------------------------------------------rJMSF044L08 34 ---------------------------------------------------------->JMSF025P21 <----------------------------------------------------------------rJMSF025P21 46 ----------------------------->JMSF001E04 <-------------------------------------------------------------------rJMSF001E04 72 ---------------------------------------------->JMSF018G12 <----------------------------------------------------------------rJMSF018G12
The following clones don't have the opposite end in this pair.