Contig 008421:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001E04Sequence341008421 (10)ref|XP_009797881.1|100PREDICTED: uncharacterized protein LOC104244208 [Nicotiana sylvestris]771008421 (10)ref|XP_010062102.1|325PREDICTED: uncharacterized protein LOC104449587 [Eucalyptus grandis] gb|KCW69161
JMSF002K17Sequence419008421 (10)ref|XP_009797881.1|97.4PREDICTED: uncharacterized protein LOC104244208 [Nicotiana sylvestris]726008421 (10)ref|XP_010062102.1|315PREDICTED: uncharacterized protein LOC104449587 [Eucalyptus grandis] gb|KCW69161
JMSF018G12Sequence537008421 (10)ref|XP_009797881.1|236PREDICTED: uncharacterized protein LOC104244208 [Nicotiana sylvestris]739008421 (10)ref|XP_010062102.1|325PREDICTED: uncharacterized protein LOC104449587 [Eucalyptus grandis] gb|KCW69161
JMSF025P21Sequence675008421 (10)ref|XP_009797881.1|298PREDICTED: uncharacterized protein LOC104244208 [Nicotiana sylvestris]773008421 (10)ref|XP_010062102.1|327PREDICTED: uncharacterized protein LOC104449587 [Eucalyptus grandis] gb|KCW69161
JMSF044L08Sequence754008421 (10)ref|XP_009797881.1|347PREDICTED: uncharacterized protein LOC104244208 [Nicotiana sylvestris]716008421 (10)ref|XP_010062102.1|306PREDICTED: uncharacterized protein LOC104449587 [Eucalyptus grandis] gb|KCW69161

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF002K17- GGACTCCTTGGGTCCATCTCCATTCGTGTTTGCTCGATTTGAAATCCATTCATTTTGGAT
JMSF025P21- GCTCGATTTGAAATCCATTCATTTTGGAT
JMSF001E04- TCCATTCATTTTGGAT
JMSF044L08- GCTCGATTTGAAATCCATTCATTTTGGAT
                      ____________________________________________________________
consensus GGACTCCTTGGGTCCATCTCCATTCGTGTTTGCTCGATTTGAAATCCATTCATTTTGGAT
 
. : . : . : . : . : . :
JMSF002K17- ATTCCATTTCAGCCGGAAAATCCACAACTCTCCGGATTTCCGAACACTAACGGTCCTTCA
JMSF025P21- ATTCCATTTCAGCCGGAAAATCCACAACTCTCCGGATTTCCGAACACTAACGGTCCTTCA
JMSF018G12- AGCCGGAAAATCCACAACTCTCCGGATTTCCGAACACTAACGGTCCTTCA
JMSF001E04- ATTCCATTTCAGCCGGAAAATCCACAACTCTCCGGATTTCCGAACACTAACGGTCCTTCA
JMSF044L08- ATTCCATTTCAGCCGGAAAATCCACAACTCTCCGGATTTCCGAACACTAACGGTCCTTCA
                      ____________________________________________________________
consensus ATTCCATTTCAGCCGGAAAATCCACAACTCTCCGGATTTCCGAACACTAACGGTCCTTCA
 
. : . : . : . : . : . :
JMSF002K17- GAAAATGGCAGATGATAAGAAAGAGTCAACGTCGTCGTCGAGTTCGCCGCGCCGGAGCGA
JMSF025P21- GAAAATGGCAGATGATAAGAAAGAGTCAACATCGTCGTCGAGTTCGCCGCGCCGGAGCGA
JMSF018G12- GAAAATGGCAGATGATAAGAAAGAGTCAACGTCGTCGTCGAGTTCGCCGCGCCGGAGCGA
JMSF001E04- GAAAATGGCAGATGATAAGAAAGAGTCAACGTCGTCGTCGAGTTCGCCGCGCCGGAGCGA
JMSF044L08- GAAAATGGCAGATGATAAGAAAGAGTCAACGTCGTCGTCGAGTTCGCCGCGCCGGAGCGA
                      ____________________________________________________________
consensus GAAAATGGCAGATGATAAGAAAGAGTCAACGTCGTCGTCGAGTTCGCCGCGCCGGAGCGA
 
. : . : . : . : . : . :
JMSF002K17- CCTTCACCACCACCACCTCCACCATCAGTTGGGGCAAGAAGATCCCGAAGATCCTGCTAA
JMSF025P21- CCTTCACCACCACCACCTCCACCATCAGTTGGGGCAAGAAGATCCCGAAGATCCTGCTAA
JMSF018G12- CCTTCACCACCACCACCTCCACCATCAGTTGGGGCAAGAAGATCCCGAAGATCCTGCTAA
JMSF001E04- CCTTCACCACCACCACCTCCACCATCAGTTGGGGCAAGAAGATCCCGAAGATCCTGCTAA
JMSF044L08- CCTTCACCACCACCACCTCCACCATCAGTTGGGGCAAGAAGATCCCGAAGATCCTGCTAA
                      ____________________________________________________________
consensus CCTTCACCACCACCACCTCCACCATCAGTTGGGGCAAGAAGATCCCGAAGATCCTGCTAA
 
. : . : . : . : . : . :
JMSF002K17- ATCTCCTCCTAATTCCCCCAATTCCTCTACTCGCAAGGCTTGCTATGCTGTTCTGCAAAG
JMSF025P21- ATCTCCTCCTAATTCCCCCAATTCCTCTACTCGCAAGGCTTGCTATGCTGTTCTGCAAAG
JMSF018G12- ATCTCCTCCTAATTCCCCCAATTCCTCTACTCGCAAGGCTTGCTATGCTGTTCTGCAAAG
JMSF001E04- ATCTCCTCCTAATTCCCCCAATTCCTCTACTCGCAAGGCTTGCTATGCTGTTCTGCAAAG
JMSF044L08- ATCTCCTCCTAATTCCCCCAATTCCTCTACTCGCAAGGCTTGCTATGCTGTTCTGCAAAG
                      ____________________________________________________________
consensus ATCTCCTCCTAATTCCCCCAATTCCTCTACTCGCAAGGCTTGCTATGCTGTTCTGCAAAG
 
. : . : . : . : . : . :
JMSF002K17- TTGGGTTTCAAAGAAGTTCATGACTGGATGTTTTGTCCTCTTCCCTGTGGCGGTTACTTT
JMSF025P21- TTGGGTTTCAAAGAAGTTCATGACTGGATGTTTTGTCCTCTTCCCTGTGGCGGTTACTTT
JMSF018G12- TTGGGTTTCAAAGAAGTTCATGACTGGATGTTTTGTCCTCTTCCCTGTGGCGGTTACTTT
JMSF001E04- TTGGGTTTCAAAGAAGTTCATGACTGGATGTTTTGTCCTCTTCCCTGTGGCGGTTACTTT
JMSF044L08- TTGGGTTTCAAAGAAGTTCATGACTGGATGTTTTGTCCTCTTCCCTGTGGCGGTTACTTT
                      ____________________________________________________________
consensus TTGGGTTTCAAAGAAGTTCATGACTGGATGTTTTGTCCTCTTCCCTGTGGCGGTTACTTT
 
. : . : . : . : . : . :
JMSF002K17- CTTTGTTACATGGTGG-TTATTCAATTTGTTGATGGNTTCTTCAGTCCCATCTATGAAAG
JMSF025P21- CTTTGTTACATGGTGGTTTATTCAATTTGTTGATGGTTTCTTCAGTCCCATCTATGAAAG
JMSF018G12- CTTTGTTACATGGTGGTTTATTCAATTTGTTGATGGTTTCTTCAGTCCCATCTATGAAAG
JMSF001E04- CTTTGTTACATGGTGGTTTATTC
JMSF044L08- CTTTGTTACATGGTGGTTTATTCAATTTGTTGATGGTTTCTTCAGTCCCATCTATGAAAG
rJMSF025P21+ TTCTTCAGTCCCATCTATGAAAG
rJMSF001E04+ TACATGGTGGTTTATTCCATTTGTTGATGG-TTCTTCAGTCCCATCTATGAAAG
rJMSF018G12+ TTCAGTCCCATCTATGAAAG
rJMSF002K17+ TGAAAG
                      ____________________________________________________________
consensus CTTTGTTACATGGTGGTTTATTCAATTTGTTGATGGTTTCTTCAGTCCCATCTATGAAAG
 
. : . : . : . : . : . :
JMSF025P21- ACTTGGCATCAATGTATTTGGACTTGGATTCATCACATCATTAATATTTGTATTTTTCAT
JMSF018G12- ACTTGGCATCAATGTATTTGGACTTGGATTCATCACATCATTAATATTTGTATTTTTCAT
JMSF044L08- ACTTGGCATCAATGTATTTGGACTTGGATTCATCACATCATTAATATTTGTATTTTTCAT
rJMSF025P21+ ACTTGGCATCAATGTATTTGGACTNGGATTCATCACATCATTAATATTTGTATTTTTCAT
rJMSF001E04+ ACTTGGCATCAATGTATTTGGACTTGGATTCATCACATCANTAATATTTGTATTTTTCAT
rJMSF018G12+ ACTTGGCATCAATGTATTTGGACTTGGATTCATCACATCATTAATATTTGTATTTTTCAT
rJMSF044L08+ GGCATCAATGTATTNGGACTTGGATTCATCACATCATTAATATTTGTATTTTTCAT
rJMSF002K17+ ACTTGGCATCAATGTATTTGGACTTGGATTCATCACATCATTAATATTTGTATTTTTCAT
                      ____________________________________________________________
consensus ACTTGGCATCAATGTATTTGGACTTGGATTCATCACATCATTAATATTTGTATTTTTCAT
 
. : . : . : . : . : . :
JMSF025P21- TGGTGTTTTTGCCTCATCATGGTTTGGTGCAACTGTCTTCTGGTTAGGGGAATGGTTTAT
JMSF018G12- TGGTGTTTTTGCCTCATCATGGTTTGGTGCAACTGTCTTCTGGTTAGGGGAATGGTTTAT
JMSF044L08- TGGTGTTTTTGCCTCATCATGGTTTGGTGCAACTGTCTTCTGGTTAGGGGAATGGTTTAT
rJMSF025P21+ TGGTGTTTTTGCCTCATCATGGTTTGGTGCAACTGTCTTCTGGTTAGGGGAATGGTTTAT
rJMSF001E04+ TGGTGTTTTTGCCTCATCATGGTTTGGTGCAACTGTCTTCTGGTTAGGGGAATGGTTTAT
rJMSF018G12+ TGGTGTTTTTGCCTCATCATGGTTTGGTGCAACTGTCTTCTGGTTAGGGGAATGGTTTAT
rJMSF044L08+ TGGTGTTTTTGCCTCATCATGGTTTGGTGCAACTGTCTTCTGGTTAGGGGAATGGTTTAT
rJMSF002K17+ TGGTGTTTTTGCCTCATCATGGTTTGGTGCAACTGTCTTCTGGTTAGGGGAATGGTTTAT
                      ____________________________________________________________
consensus TGGTGTTTTTGCCTCATCATGGTTTGGTGCAACTGTCTTCTGGTTAGGGGAATGGTTTAT
 
. : . : . : . : . : . :
JMSF025P21- CAAGCGAATGCCCTTTGTAAAACACATATACTCTGCATCCAAACAAATTAGTTCTGCTAT
JMSF018G12- CAAGCGAATGCCCTTTGTAAAACACATATACTCTGCATCCAAACAAATTAGTTCTGCTAT
JMSF044L08- CAAGCGAATGCCCTTTGTAAAACACATATACTCTGCATCCAAACAAATTAGTTCTGCTAT
rJMSF025P21+ CAAGCGAATGCCCTTTGTAAAACACATATACTCTGCATCCAAACAAATTAGTTCTGCTAT
rJMSF001E04+ CAAGCGAATGCCCTTTGTAAAACACATATACTCTGCATCCAAACAAATTAGTTCTGCTAT
rJMSF018G12+ CAAGCGAATGCCCTTTGTAAAACACATATACTCTGCATCCAAACAAATTAGTTCTGCTAT
rJMSF044L08+ CAAGCGAATGCCCTTTGTAAAACACATATACTCTGCATCCAAACAAATTAGTTCTGCTAT
rJMSF002K17+ CAAGCGAATGCCCTTTGTAAAACACATATACTCTGCATCCAAACAAATTAGTTCTGCTAT
                      ____________________________________________________________
consensus CAAGCGAATGCCCTTTGTAAAACACATATACTCTGCATCCAAACAAATTAGTTCTGCTAT
 
. : . : . : . : . : . :
JMSF025P21- ATCTCCAGATCAAAATACCACTGCTTTTAAGGAAGTTGCAATCATCCGCCACCCCCGAGT
JMSF018G12- ATCTCC
JMSF044L08- ATCTCCAGATCAAAATACCACTGCTTTTAAGGAAGTTGCAATCATCCGCCACCCCCGAGT
rJMSF025P21+ ATCTCCAGATCAAAATACCACTGCTTTTAAGGAAGTTGCAATCATCCGCCACCCCCGAGT
rJMSF001E04+ ATCTCCAGATCAAAATACCACTGCTTTTAAGGAAGTTGCAATCATCCGCCACCCCCGAGT
rJMSF018G12+ ATCTCCAGATCAAAATACCACTGCTTTTAAGGAAGTTGCAATCATCCGCCACCCCCGAGT
rJMSF044L08+ ATCTCCAGATCAAAATACCACTGCTTTTAAGGAAGTTGCAATCATCCGCCACCCCCGAGT
rJMSF002K17+ ATCTCCAGATCAAAATACCACTGCTTTTAAGGAAGTTGCAATCATCCGCCACCCCCGAGT
                      ____________________________________________________________
consensus ATCTCCAGATCAAAATACCACTGCTTTTAAGGAAGTTGCAATCATCCGCCACCCCCGAGT
 
. : . : . : . : . : . :
JMSF025P21- TGGTGAATATGCACTTGGTTTCATAACGTCATCACTTGTTCTCCA
JMSF044L08- TGGTGAATATGCACTTGGTTTCATAACGTCATCACTTGTTCTCCAGACTCATAATGGCGA
rJMSF025P21+ TGGTGAATATGCACTTGGTTTCATAACGTCATCACTTGTTCTCCAGACTCATAATGGCGA
rJMSF001E04+ TGGTGAATATGCACTTGGTTTCATAACGTCATCACTTGTTCTCCAGACTCATAATGGCGA
rJMSF018G12+ TGGTGAATATGCACTTGGTTTCATAACGTCATCACTTGTTCTCCAGACTCATAATGGCGA
rJMSF044L08+ TGGTGAATATGCACTTGGTTTCATAACGTCATCACTTGTTCTCCAGACTCATAATGGCGA
rJMSF002K17+ TGGTGAATATGCACTTGGTTTCATAACGTCATCACTTGTTCTCCAGACTCATAATGGCGA
                      ____________________________________________________________
consensus TGGTGAATATGCACTTGGTTTCATAACGTCATCACTTGTTCTCCAGACTCATAATGGCGA
 
. : . : . : . : . : . :
JMSF044L08- TGAAGAGTTATGCAGTGTGTATGTCCCTACAAATCATTTATATATCGGAGACATATTTCT
rJMSF025P21+ TGAAGAGTTATGCAGTGTGTATGTCCCTACAAATCATTTATATATCGGAGACATATTTCT
rJMSF001E04+ TGAAGAGTTATGCAGTGTGTATGTCCCTACAAATCATTTATATATCGGAGACATATTTCT
rJMSF018G12+ TGAAGAGTTATGCAGTGTGTATGTCCCTACAAATCATTTATATATCGGAGACATATTTCT
rJMSF044L08+ TGAAGAGTTATGCAGTGTGTATGTCCCTACAAATCATTTATATATCGGAGACATATTTCT
rJMSF002K17+ TGAAGAGTTATGCAGTGTGTATGTCCCTACAAATCATTTATATATCGGAGACATATTTCT
                      ____________________________________________________________
consensus TGAAGAGTTATGCAGTGTGTATGTCCCTACAAATCATTTATATATCGGAGACATATTTCT
 
. : . : . : . : . : . :
JMSF044L08- AATT
rJMSF025P21+ AATTAATTCCAAGGAGATCATAAGGCCTAATTTGTCTATTCGAGAAGGCATAGAGATCAT
rJMSF001E04+ AATTAATTCCAAGGAGATCATAAGGCCTAATTTGTCTATTCGAGAAGGCATAGAGATCAT
rJMSF018G12+ AATTAATTCCAAGGAGATCATAAGGCCTAATTTGTCTATTCGAGAAGGCATAGAGATCAT
rJMSF044L08+ AATTAATTCCAAGGAGATCATAAGGCCTAATTTGTCTATTCGAGAAGGCATAGAGATCAT
rJMSF002K17+ AATTAATTCCAAGGAGATCATAAGGCCTAATTTGTCTATTCGAGAAGGCATAGAGATCAT
                      ____________________________________________________________
consensus AATTAATTCCAAGGAGATCATAAGGCCTAATTTGTCTATTCGAGAAGGCATAGAGATCAT
 
. : . : . : . : . : . :
rJMSF025P21+ TGTTTCAGTGGGAATGTCGATGCCTCAAATGATTTCTCCTGTGGATACAATTACACGTCA
rJMSF001E04+ TGTTTCAGTGGGAATGTCGATGCCTCAAATGATTTCTCCTGTGGATACAATTACACGTCA
rJMSF018G12+ TGTTTCAGTGGGAATGTCGATGCCTCAAATGATTTCTCCTGTGGATACAATTACACGTCA
rJMSF044L08+ TGTTTCAGTGGGAATGTCGATGCCTCAAATGATTTCTCCTGTGGATACAATTACACGTCA
rJMSF002K17+ TGTTTCAGTGGGAATGTCGATGCCTCAAATGATTTCTCCTGTGGATACAATTACACGTCA
                      ____________________________________________________________
consensus TGTTTCAGTGGGAATGTCGATGCCTCAAATGATTTCTCCTGTGGATACAATTACACGTCA
 
. : . : . : . : . : . :
rJMSF025P21+ GAACGAGAGGATCCCTCTGAACAGAATGGTGAAGTAAATGAGAAAGTGAAGATGTGTATT
rJMSF001E04+ GAACGAGAGGATCCCTCTGAACAGAATGGTGAAGTAAATGAGAAAGTGAAGATGTGTATT
rJMSF018G12+ GAACGAGAGGATCCCTCTGAACAGAATGGTGAAGTAAATGAGAAAGTGAAGATGTGTATT
rJMSF044L08+ GAACGAGAGGATCCCTCTGAACAGAATGGTGAAGTAAATGAGAAAGTGAAGATGTGTATT
rJMSF002K17+ GAACGAGAGGATCCCTCTGAACAGAATGGTGAAGTAAATGAGAAAGTGAAGATGTGTATT
                      ____________________________________________________________
consensus GAACGAGAGGATCCCTCTGAACAGAATGGTGAAGTAAATGAGAAAGTGAAGATGTGTATT
 
. : . : . : . : . : . :
rJMSF025P21+ TTGTGATTTGTACCACACTGATGTATTATTATTAGTTTTGAAGATAGGTACGATGCCGGC
rJMSF001E04+ TTGTGATTTGTACCACACTGATGTATTATTATTAGTTTTGAAGATAGGTACGATGCCGGC
rJMSF018G12+ TTGTGATTTGTACCACACTGATGTATTATTATTAGTTTTGAAGATAGGTACGATGCCGGC
rJMSF044L08+ TTGTGATTTGTACCACACTGATGTATTATTATTAGTTTTGAAGATAGGTACGATGCCGGC
rJMSF002K17+ TTGTGATTTGTACCACACTGATGTATTATTATTAGTTTTGAAGATAGGTACGATGCCGGC
                      ____________________________________________________________
consensus TTGTGATTTGTACCACACTGATGTATTATTATTAGTTTTGAAGATAGGTACGATGCCGGC
 
. : . : . : . : . : . :
rJMSF025P21+ AGCATTTACGCTATTTTGTTGGTATAGAATCAGTTGGGTGAGTGCTAATATGTGTGTGTT
rJMSF001E04+ AGCATTTACGCTATTTTGTTGGTATAGAATCAGTTGGGTGAGTGCTAATATGTGTGTGTT
rJMSF018G12+ AGCATTTACGCTATTTTGTTGGTATAGAATCAGTTGGGTGAGTGCTAATATGTGTGTGTT
rJMSF044L08+ AGCATTTACGCTATTTTGTTGGTATAGAATCAGTTGGGTGAGTGCTAATATGTGTGTGTT
rJMSF002K17+ AGCATTTACGCTATTTTGTTGGTATAGAATCAGTTGGGTGAGTGCTAATATGTGTGTGTT
                      ____________________________________________________________
consensus AGCATTTACGCTATTTTGTTGGTATAGAATCAGTTGGGTGAGTGCTAATATGTGTGTGTT
 
. : . : . : . : . : . :
rJMSF025P21+ TTTAATGAAACTCCGAGCTGGAGGAATTGTGTATAGGTACCAAATCATCATCAGCAT
rJMSF001E04+ TTTAATGAAACTCCGAGCTGGAGGAATTGTGTATAGGTACCAAATCATCATCAGCATC
rJMSF018G12+ TTTAATGAAACTCCGAGCTGGAGGAATTGTGTATAGGTACCAAATCATCATCAGCATC
rJMSF044L08+ TTTAATGAAACTCCGAGCTGGAGGAATTGTGTATAGGTACCAAATCATCATCAGCATC
rJMSF002K17+ TTTAATGAAACTCCGAGCTGGAGGAATTGTGTATAGGTACCAAATCATCATCAGCATCTG
                      ____________________________________________________________
consensus TTTAATGAAACTCCGAGCTGGAGGAATTGTGTATAGGTACCAAATCATCATCAGCATCTG