Contig 008421:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001E04Sequence341008421 (10)ref|XP_009797881.1|100PREDICTED: uncharacterized protein LOC104244208 [Nicotiana sylvestris]771008421 (10)ref|XP_010062102.1|325PREDICTED: uncharacterized protein LOC104449587 [Eucalyptus grandis] gb|KCW69161
JMSF002K17Sequence419008421 (10)ref|XP_009797881.1|97.4PREDICTED: uncharacterized protein LOC104244208 [Nicotiana sylvestris]726008421 (10)ref|XP_010062102.1|315PREDICTED: uncharacterized protein LOC104449587 [Eucalyptus grandis] gb|KCW69161
JMSF018G12Sequence537008421 (10)ref|XP_009797881.1|236PREDICTED: uncharacterized protein LOC104244208 [Nicotiana sylvestris]739008421 (10)ref|XP_010062102.1|325PREDICTED: uncharacterized protein LOC104449587 [Eucalyptus grandis] gb|KCW69161
JMSF025P21Sequence675008421 (10)ref|XP_009797881.1|298PREDICTED: uncharacterized protein LOC104244208 [Nicotiana sylvestris]773008421 (10)ref|XP_010062102.1|327PREDICTED: uncharacterized protein LOC104449587 [Eucalyptus grandis] gb|KCW69161
JMSF044L08Sequence754008421 (10)ref|XP_009797881.1|347PREDICTED: uncharacterized protein LOC104244208 [Nicotiana sylvestris]716008421 (10)ref|XP_010062102.1|306PREDICTED: uncharacterized protein LOC104449587 [Eucalyptus grandis] gb|KCW69161

Alignment

This contig is upended


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JMSF002K17-           GGACTCCTTGGGTCCATCTCCATTCGTGTTTGCTCGATTTGAAATCCATTCATTTTGGAT
JMSF025P21-                                          GCTCGATTTGAAATCCATTCATTTTGGAT
JMSF001E04-                                                       TCCATTCATTTTGGAT
JMSF044L08-                                          GCTCGATTTGAAATCCATTCATTTTGGAT
                      ____________________________________________________________
consensus             GGACTCCTTGGGTCCATCTCCATTCGTGTTTGCTCGATTTGAAATCCATTCATTTTGGAT
 
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JMSF002K17-           ATTCCATTTCAGCCGGAAAATCCACAACTCTCCGGATTTCCGAACACTAACGGTCCTTCA
JMSF025P21-           ATTCCATTTCAGCCGGAAAATCCACAACTCTCCGGATTTCCGAACACTAACGGTCCTTCA
JMSF018G12-                     AGCCGGAAAATCCACAACTCTCCGGATTTCCGAACACTAACGGTCCTTCA
JMSF001E04-           ATTCCATTTCAGCCGGAAAATCCACAACTCTCCGGATTTCCGAACACTAACGGTCCTTCA
JMSF044L08-           ATTCCATTTCAGCCGGAAAATCCACAACTCTCCGGATTTCCGAACACTAACGGTCCTTCA
                      ____________________________________________________________
consensus             ATTCCATTTCAGCCGGAAAATCCACAACTCTCCGGATTTCCGAACACTAACGGTCCTTCA
 
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JMSF002K17-           GAAAATGGCAGATGATAAGAAAGAGTCAACGTCGTCGTCGAGTTCGCCGCGCCGGAGCGA
JMSF025P21-           GAAAATGGCAGATGATAAGAAAGAGTCAACATCGTCGTCGAGTTCGCCGCGCCGGAGCGA
JMSF018G12-           GAAAATGGCAGATGATAAGAAAGAGTCAACGTCGTCGTCGAGTTCGCCGCGCCGGAGCGA
JMSF001E04-           GAAAATGGCAGATGATAAGAAAGAGTCAACGTCGTCGTCGAGTTCGCCGCGCCGGAGCGA
JMSF044L08-           GAAAATGGCAGATGATAAGAAAGAGTCAACGTCGTCGTCGAGTTCGCCGCGCCGGAGCGA
                      ____________________________________________________________
consensus             GAAAATGGCAGATGATAAGAAAGAGTCAACGTCGTCGTCGAGTTCGCCGCGCCGGAGCGA
 
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JMSF002K17-           CCTTCACCACCACCACCTCCACCATCAGTTGGGGCAAGAAGATCCCGAAGATCCTGCTAA
JMSF025P21-           CCTTCACCACCACCACCTCCACCATCAGTTGGGGCAAGAAGATCCCGAAGATCCTGCTAA
JMSF018G12-           CCTTCACCACCACCACCTCCACCATCAGTTGGGGCAAGAAGATCCCGAAGATCCTGCTAA
JMSF001E04-           CCTTCACCACCACCACCTCCACCATCAGTTGGGGCAAGAAGATCCCGAAGATCCTGCTAA
JMSF044L08-           CCTTCACCACCACCACCTCCACCATCAGTTGGGGCAAGAAGATCCCGAAGATCCTGCTAA
                      ____________________________________________________________
consensus             CCTTCACCACCACCACCTCCACCATCAGTTGGGGCAAGAAGATCCCGAAGATCCTGCTAA
 
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JMSF002K17-           ATCTCCTCCTAATTCCCCCAATTCCTCTACTCGCAAGGCTTGCTATGCTGTTCTGCAAAG
JMSF025P21-           ATCTCCTCCTAATTCCCCCAATTCCTCTACTCGCAAGGCTTGCTATGCTGTTCTGCAAAG
JMSF018G12-           ATCTCCTCCTAATTCCCCCAATTCCTCTACTCGCAAGGCTTGCTATGCTGTTCTGCAAAG
JMSF001E04-           ATCTCCTCCTAATTCCCCCAATTCCTCTACTCGCAAGGCTTGCTATGCTGTTCTGCAAAG
JMSF044L08-           ATCTCCTCCTAATTCCCCCAATTCCTCTACTCGCAAGGCTTGCTATGCTGTTCTGCAAAG
                      ____________________________________________________________
consensus             ATCTCCTCCTAATTCCCCCAATTCCTCTACTCGCAAGGCTTGCTATGCTGTTCTGCAAAG
 
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JMSF002K17-           TTGGGTTTCAAAGAAGTTCATGACTGGATGTTTTGTCCTCTTCCCTGTGGCGGTTACTTT
JMSF025P21-           TTGGGTTTCAAAGAAGTTCATGACTGGATGTTTTGTCCTCTTCCCTGTGGCGGTTACTTT
JMSF018G12-           TTGGGTTTCAAAGAAGTTCATGACTGGATGTTTTGTCCTCTTCCCTGTGGCGGTTACTTT
JMSF001E04-           TTGGGTTTCAAAGAAGTTCATGACTGGATGTTTTGTCCTCTTCCCTGTGGCGGTTACTTT
JMSF044L08-           TTGGGTTTCAAAGAAGTTCATGACTGGATGTTTTGTCCTCTTCCCTGTGGCGGTTACTTT
                      ____________________________________________________________
consensus             TTGGGTTTCAAAGAAGTTCATGACTGGATGTTTTGTCCTCTTCCCTGTGGCGGTTACTTT
 
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JMSF002K17-           CTTTGTTACATGGTGG-TTATTCAATTTGTTGATGGNTTCTTCAGTCCCATCTATGAAAG
JMSF025P21-           CTTTGTTACATGGTGGTTTATTCAATTTGTTGATGGTTTCTTCAGTCCCATCTATGAAAG
JMSF018G12-           CTTTGTTACATGGTGGTTTATTCAATTTGTTGATGGTTTCTTCAGTCCCATCTATGAAAG
JMSF001E04-           CTTTGTTACATGGTGGTTTATTC                                     
JMSF044L08-           CTTTGTTACATGGTGGTTTATTCAATTTGTTGATGGTTTCTTCAGTCCCATCTATGAAAG
rJMSF025P21+                                               TTCTTCAGTCCCATCTATGAAAG
rJMSF001E04+                TACATGGTGGTTTATTCCATTTGTTGATGG-TTCTTCAGTCCCATCTATGAAAG
rJMSF018G12+                                                  TTCAGTCCCATCTATGAAAG
rJMSF002K17+                                                                TGAAAG
                      ____________________________________________________________
consensus             CTTTGTTACATGGTGGTTTATTCAATTTGTTGATGGTTTCTTCAGTCCCATCTATGAAAG
 
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JMSF025P21-           ACTTGGCATCAATGTATTTGGACTTGGATTCATCACATCATTAATATTTGTATTTTTCAT
JMSF018G12-           ACTTGGCATCAATGTATTTGGACTTGGATTCATCACATCATTAATATTTGTATTTTTCAT
JMSF044L08-           ACTTGGCATCAATGTATTTGGACTTGGATTCATCACATCATTAATATTTGTATTTTTCAT
rJMSF025P21+          ACTTGGCATCAATGTATTTGGACTNGGATTCATCACATCATTAATATTTGTATTTTTCAT
rJMSF001E04+          ACTTGGCATCAATGTATTTGGACTTGGATTCATCACATCANTAATATTTGTATTTTTCAT
rJMSF018G12+          ACTTGGCATCAATGTATTTGGACTTGGATTCATCACATCATTAATATTTGTATTTTTCAT
rJMSF044L08+              GGCATCAATGTATTNGGACTTGGATTCATCACATCATTAATATTTGTATTTTTCAT
rJMSF002K17+          ACTTGGCATCAATGTATTTGGACTTGGATTCATCACATCATTAATATTTGTATTTTTCAT
                      ____________________________________________________________
consensus             ACTTGGCATCAATGTATTTGGACTTGGATTCATCACATCATTAATATTTGTATTTTTCAT
 
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JMSF025P21-           TGGTGTTTTTGCCTCATCATGGTTTGGTGCAACTGTCTTCTGGTTAGGGGAATGGTTTAT
JMSF018G12-           TGGTGTTTTTGCCTCATCATGGTTTGGTGCAACTGTCTTCTGGTTAGGGGAATGGTTTAT
JMSF044L08-           TGGTGTTTTTGCCTCATCATGGTTTGGTGCAACTGTCTTCTGGTTAGGGGAATGGTTTAT
rJMSF025P21+          TGGTGTTTTTGCCTCATCATGGTTTGGTGCAACTGTCTTCTGGTTAGGGGAATGGTTTAT
rJMSF001E04+          TGGTGTTTTTGCCTCATCATGGTTTGGTGCAACTGTCTTCTGGTTAGGGGAATGGTTTAT
rJMSF018G12+          TGGTGTTTTTGCCTCATCATGGTTTGGTGCAACTGTCTTCTGGTTAGGGGAATGGTTTAT
rJMSF044L08+          TGGTGTTTTTGCCTCATCATGGTTTGGTGCAACTGTCTTCTGGTTAGGGGAATGGTTTAT
rJMSF002K17+          TGGTGTTTTTGCCTCATCATGGTTTGGTGCAACTGTCTTCTGGTTAGGGGAATGGTTTAT
                      ____________________________________________________________
consensus             TGGTGTTTTTGCCTCATCATGGTTTGGTGCAACTGTCTTCTGGTTAGGGGAATGGTTTAT
 
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JMSF025P21-           CAAGCGAATGCCCTTTGTAAAACACATATACTCTGCATCCAAACAAATTAGTTCTGCTAT
JMSF018G12-           CAAGCGAATGCCCTTTGTAAAACACATATACTCTGCATCCAAACAAATTAGTTCTGCTAT
JMSF044L08-           CAAGCGAATGCCCTTTGTAAAACACATATACTCTGCATCCAAACAAATTAGTTCTGCTAT
rJMSF025P21+          CAAGCGAATGCCCTTTGTAAAACACATATACTCTGCATCCAAACAAATTAGTTCTGCTAT
rJMSF001E04+          CAAGCGAATGCCCTTTGTAAAACACATATACTCTGCATCCAAACAAATTAGTTCTGCTAT
rJMSF018G12+          CAAGCGAATGCCCTTTGTAAAACACATATACTCTGCATCCAAACAAATTAGTTCTGCTAT
rJMSF044L08+          CAAGCGAATGCCCTTTGTAAAACACATATACTCTGCATCCAAACAAATTAGTTCTGCTAT
rJMSF002K17+          CAAGCGAATGCCCTTTGTAAAACACATATACTCTGCATCCAAACAAATTAGTTCTGCTAT
                      ____________________________________________________________
consensus             CAAGCGAATGCCCTTTGTAAAACACATATACTCTGCATCCAAACAAATTAGTTCTGCTAT
 
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JMSF025P21-           ATCTCCAGATCAAAATACCACTGCTTTTAAGGAAGTTGCAATCATCCGCCACCCCCGAGT
JMSF018G12-           ATCTCC                                                      
JMSF044L08-           ATCTCCAGATCAAAATACCACTGCTTTTAAGGAAGTTGCAATCATCCGCCACCCCCGAGT
rJMSF025P21+          ATCTCCAGATCAAAATACCACTGCTTTTAAGGAAGTTGCAATCATCCGCCACCCCCGAGT
rJMSF001E04+          ATCTCCAGATCAAAATACCACTGCTTTTAAGGAAGTTGCAATCATCCGCCACCCCCGAGT
rJMSF018G12+          ATCTCCAGATCAAAATACCACTGCTTTTAAGGAAGTTGCAATCATCCGCCACCCCCGAGT
rJMSF044L08+          ATCTCCAGATCAAAATACCACTGCTTTTAAGGAAGTTGCAATCATCCGCCACCCCCGAGT
rJMSF002K17+          ATCTCCAGATCAAAATACCACTGCTTTTAAGGAAGTTGCAATCATCCGCCACCCCCGAGT
                      ____________________________________________________________
consensus             ATCTCCAGATCAAAATACCACTGCTTTTAAGGAAGTTGCAATCATCCGCCACCCCCGAGT
 
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JMSF025P21-           TGGTGAATATGCACTTGGTTTCATAACGTCATCACTTGTTCTCCA               
JMSF044L08-           TGGTGAATATGCACTTGGTTTCATAACGTCATCACTTGTTCTCCAGACTCATAATGGCGA
rJMSF025P21+          TGGTGAATATGCACTTGGTTTCATAACGTCATCACTTGTTCTCCAGACTCATAATGGCGA
rJMSF001E04+          TGGTGAATATGCACTTGGTTTCATAACGTCATCACTTGTTCTCCAGACTCATAATGGCGA
rJMSF018G12+          TGGTGAATATGCACTTGGTTTCATAACGTCATCACTTGTTCTCCAGACTCATAATGGCGA
rJMSF044L08+          TGGTGAATATGCACTTGGTTTCATAACGTCATCACTTGTTCTCCAGACTCATAATGGCGA
rJMSF002K17+          TGGTGAATATGCACTTGGTTTCATAACGTCATCACTTGTTCTCCAGACTCATAATGGCGA
                      ____________________________________________________________
consensus             TGGTGAATATGCACTTGGTTTCATAACGTCATCACTTGTTCTCCAGACTCATAATGGCGA
 
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JMSF044L08-           TGAAGAGTTATGCAGTGTGTATGTCCCTACAAATCATTTATATATCGGAGACATATTTCT
rJMSF025P21+          TGAAGAGTTATGCAGTGTGTATGTCCCTACAAATCATTTATATATCGGAGACATATTTCT
rJMSF001E04+          TGAAGAGTTATGCAGTGTGTATGTCCCTACAAATCATTTATATATCGGAGACATATTTCT
rJMSF018G12+          TGAAGAGTTATGCAGTGTGTATGTCCCTACAAATCATTTATATATCGGAGACATATTTCT
rJMSF044L08+          TGAAGAGTTATGCAGTGTGTATGTCCCTACAAATCATTTATATATCGGAGACATATTTCT
rJMSF002K17+          TGAAGAGTTATGCAGTGTGTATGTCCCTACAAATCATTTATATATCGGAGACATATTTCT
                      ____________________________________________________________
consensus             TGAAGAGTTATGCAGTGTGTATGTCCCTACAAATCATTTATATATCGGAGACATATTTCT
 
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JMSF044L08-           AATT                                                        
rJMSF025P21+          AATTAATTCCAAGGAGATCATAAGGCCTAATTTGTCTATTCGAGAAGGCATAGAGATCAT
rJMSF001E04+          AATTAATTCCAAGGAGATCATAAGGCCTAATTTGTCTATTCGAGAAGGCATAGAGATCAT
rJMSF018G12+          AATTAATTCCAAGGAGATCATAAGGCCTAATTTGTCTATTCGAGAAGGCATAGAGATCAT
rJMSF044L08+          AATTAATTCCAAGGAGATCATAAGGCCTAATTTGTCTATTCGAGAAGGCATAGAGATCAT
rJMSF002K17+          AATTAATTCCAAGGAGATCATAAGGCCTAATTTGTCTATTCGAGAAGGCATAGAGATCAT
                      ____________________________________________________________
consensus             AATTAATTCCAAGGAGATCATAAGGCCTAATTTGTCTATTCGAGAAGGCATAGAGATCAT
 
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rJMSF025P21+          TGTTTCAGTGGGAATGTCGATGCCTCAAATGATTTCTCCTGTGGATACAATTACACGTCA
rJMSF001E04+          TGTTTCAGTGGGAATGTCGATGCCTCAAATGATTTCTCCTGTGGATACAATTACACGTCA
rJMSF018G12+          TGTTTCAGTGGGAATGTCGATGCCTCAAATGATTTCTCCTGTGGATACAATTACACGTCA
rJMSF044L08+          TGTTTCAGTGGGAATGTCGATGCCTCAAATGATTTCTCCTGTGGATACAATTACACGTCA
rJMSF002K17+          TGTTTCAGTGGGAATGTCGATGCCTCAAATGATTTCTCCTGTGGATACAATTACACGTCA
                      ____________________________________________________________
consensus             TGTTTCAGTGGGAATGTCGATGCCTCAAATGATTTCTCCTGTGGATACAATTACACGTCA
 
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rJMSF025P21+          GAACGAGAGGATCCCTCTGAACAGAATGGTGAAGTAAATGAGAAAGTGAAGATGTGTATT
rJMSF001E04+          GAACGAGAGGATCCCTCTGAACAGAATGGTGAAGTAAATGAGAAAGTGAAGATGTGTATT
rJMSF018G12+          GAACGAGAGGATCCCTCTGAACAGAATGGTGAAGTAAATGAGAAAGTGAAGATGTGTATT
rJMSF044L08+          GAACGAGAGGATCCCTCTGAACAGAATGGTGAAGTAAATGAGAAAGTGAAGATGTGTATT
rJMSF002K17+          GAACGAGAGGATCCCTCTGAACAGAATGGTGAAGTAAATGAGAAAGTGAAGATGTGTATT
                      ____________________________________________________________
consensus             GAACGAGAGGATCCCTCTGAACAGAATGGTGAAGTAAATGAGAAAGTGAAGATGTGTATT
 
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rJMSF025P21+          TTGTGATTTGTACCACACTGATGTATTATTATTAGTTTTGAAGATAGGTACGATGCCGGC
rJMSF001E04+          TTGTGATTTGTACCACACTGATGTATTATTATTAGTTTTGAAGATAGGTACGATGCCGGC
rJMSF018G12+          TTGTGATTTGTACCACACTGATGTATTATTATTAGTTTTGAAGATAGGTACGATGCCGGC
rJMSF044L08+          TTGTGATTTGTACCACACTGATGTATTATTATTAGTTTTGAAGATAGGTACGATGCCGGC
rJMSF002K17+          TTGTGATTTGTACCACACTGATGTATTATTATTAGTTTTGAAGATAGGTACGATGCCGGC
                      ____________________________________________________________
consensus             TTGTGATTTGTACCACACTGATGTATTATTATTAGTTTTGAAGATAGGTACGATGCCGGC
 
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rJMSF025P21+          AGCATTTACGCTATTTTGTTGGTATAGAATCAGTTGGGTGAGTGCTAATATGTGTGTGTT
rJMSF001E04+          AGCATTTACGCTATTTTGTTGGTATAGAATCAGTTGGGTGAGTGCTAATATGTGTGTGTT
rJMSF018G12+          AGCATTTACGCTATTTTGTTGGTATAGAATCAGTTGGGTGAGTGCTAATATGTGTGTGTT
rJMSF044L08+          AGCATTTACGCTATTTTGTTGGTATAGAATCAGTTGGGTGAGTGCTAATATGTGTGTGTT
rJMSF002K17+          AGCATTTACGCTATTTTGTTGGTATAGAATCAGTTGGGTGAGTGCTAATATGTGTGTGTT
                      ____________________________________________________________
consensus             AGCATTTACGCTATTTTGTTGGTATAGAATCAGTTGGGTGAGTGCTAATATGTGTGTGTT
 
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rJMSF025P21+          TTTAATGAAACTCCGAGCTGGAGGAATTGTGTATAGGTACCAAATCATCATCAGCAT   
rJMSF001E04+          TTTAATGAAACTCCGAGCTGGAGGAATTGTGTATAGGTACCAAATCATCATCAGCATC  
rJMSF018G12+          TTTAATGAAACTCCGAGCTGGAGGAATTGTGTATAGGTACCAAATCATCATCAGCATC  
rJMSF044L08+          TTTAATGAAACTCCGAGCTGGAGGAATTGTGTATAGGTACCAAATCATCATCAGCATC  
rJMSF002K17+          TTTAATGAAACTCCGAGCTGGAGGAATTGTGTATAGGTACCAAATCATCATCAGCATCTG
                      ____________________________________________________________
consensus             TTTAATGAAACTCCGAGCTGGAGGAATTGTGTATAGGTACCAAATCATCATCAGCATCTG