clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF010H07 | Sequence | 624 | 006351 (11) | ref|XP_011082554.1| | 5e-109 | PREDICTED: proteasome subunit beta type-4-like [Sesamum indicum] | 735 | 006351 (11) | ref|XP_010244954.1| | 3e-110 | PREDICTED: proteasome subunit beta type-4 [Nelumbo nucifera] |
JMFF019P09 | Sequence | 614 | 006351 (11) | ref|XP_011082554.1| | 1e-96 | PREDICTED: proteasome subunit beta type-4-like [Sesamum indicum] | 731 | 006351 (11) | gb|AFK35266.1| | 5e-113 | unknown [Medicago truncatula] gb|AES88654.2| proteasome subunit beta protein [Me |
JMFF031G17 | Sequence | 564 | 006351 (11) | ref|XP_011082554.1| | 5e-83 | PREDICTED: proteasome subunit beta type-4-like [Sesamum indicum] | 761 | 006351 (11) | ref|XP_010244954.1| | 3e-132 | PREDICTED: proteasome subunit beta type-4 [Nelumbo nucifera] |
JMFS150B06 | Sequence | 536 | 006351 (11) | ref|XP_011082554.1| | 8e-92 | PREDICTED: proteasome subunit beta type-4-like [Sesamum indicum] | |||||
JMSF002K24 | Sequence | 346 | 006351 (11) | ref|XP_011082554.1| | 1e-24 | PREDICTED: proteasome subunit beta type-4-like [Sesamum indicum] | 771 | 006351 (11) | ref|XP_010244954.1| | 6e-124 | PREDICTED: proteasome subunit beta type-4 [Nelumbo nucifera] |
JMSF022J08 | Sequence | 652 | 006351 (11) | ref|XP_011082554.1| | 3e-130 | PREDICTED: proteasome subunit beta type-4-like [Sesamum indicum] | 774 | 006351 (11) | ref|XP_010244954.1| | 2e-137 | PREDICTED: proteasome subunit beta type-4 [Nelumbo nucifera] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig006351============================================1086 22 ------------------------------->JMSF002K24 <----------------------------------------------------------------------rJMSF002K24 56 --------------------------------------------------------->JMFF010H07 <-------------------------------------------------------------------rJMFF010H07 80 --------------------------------------------------->JMFF031G17 <---------------------------------------------------------------------rJMFF031G17 80 -------------------------------------------------------->JMFF019P09 <------------------------------------------------------------------rJMFF019P09 196 ----------------------------------------------------------->JMSF022J08 <---------------------------------------------------------------------rJMSF022J08
The following clones don't have the opposite end in this pair.
------------------------------------------------>JMFS150B06-