| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF010H07 | Sequence | 624 | 006351 (11) | ref|XP_011082554.1| | 5e-109 | PREDICTED: proteasome subunit beta type-4-like [Sesamum indicum] | 735 | 006351 (11) | ref|XP_010244954.1| | 3e-110 | PREDICTED: proteasome subunit beta type-4 [Nelumbo nucifera] |
| JMFF019P09 | Sequence | 614 | 006351 (11) | ref|XP_011082554.1| | 1e-96 | PREDICTED: proteasome subunit beta type-4-like [Sesamum indicum] | 731 | 006351 (11) | gb|AFK35266.1| | 5e-113 | unknown [Medicago truncatula] gb|AES88654.2| proteasome subunit beta protein [Me |
| JMFF031G17 | Sequence | 564 | 006351 (11) | ref|XP_011082554.1| | 5e-83 | PREDICTED: proteasome subunit beta type-4-like [Sesamum indicum] | 761 | 006351 (11) | ref|XP_010244954.1| | 3e-132 | PREDICTED: proteasome subunit beta type-4 [Nelumbo nucifera] |
| JMFS150B06 | Sequence | 536 | 006351 (11) | ref|XP_011082554.1| | 8e-92 | PREDICTED: proteasome subunit beta type-4-like [Sesamum indicum] | |||||
| JMSF002K24 | Sequence | 346 | 006351 (11) | ref|XP_011082554.1| | 1e-24 | PREDICTED: proteasome subunit beta type-4-like [Sesamum indicum] | 771 | 006351 (11) | ref|XP_010244954.1| | 6e-124 | PREDICTED: proteasome subunit beta type-4 [Nelumbo nucifera] |
| JMSF022J08 | Sequence | 652 | 006351 (11) | ref|XP_011082554.1| | 3e-130 | PREDICTED: proteasome subunit beta type-4-like [Sesamum indicum] | 774 | 006351 (11) | ref|XP_010244954.1| | 2e-137 | PREDICTED: proteasome subunit beta type-4 [Nelumbo nucifera] |
This contig is upended
. : . : . : . : . : . :
rJMFF010H07- TCCCAA
____________________________________________________________
consensus TCCCAA
. : . : . : . : . : . :
rJMFF010H07- TAAAAGACAATGCACATCACTCCATTAGATTTCAATTCAAACATAAAAAAGCAGGACAAT
rJMFF019P09- T
rJMSF002K24- TCACTCCATTAGATTTCAATTCAAACATAAAAAAGCAGGACAAT
rJMFF031G17- T
____________________________________________________________
consensus TAAAAGACAATGCACATCACTCCATTAGATTTCAATTCAAACATAAAAAAGCAGGACAAT
. : . : . : . : . : . :
rJMFF010H07- AAAATAACCAGTTCTCGGCATACAGGTACAGTCAATATTCCCTAATTAGATAATAGTTTG
rJMFF019P09- AAAATAACAAGTTCTCGGCATACAGGTACAGTCAATATTCCCTAATTAGATAATAGTTTG
rJMSF002K24- AAAATAACCAGTTCTCGGCATACAGGTACAGTCAATATTCCCTAATTAGATAATAGTTTG
rJMFF031G17- AAAATAACCAGTTCTCGGCATACAGGTACAGTCAATATTCCCTAATTAGATAATAGTTTG
rJMSF022J08- GGTACAGTCAATATTCCCTAATTAGATAATAGTTTG
____________________________________________________________
consensus AAAATAACCAGTTCTCGGCATACAGGTACAGTCAATATTCCCTAATTAGATAATAGTTTG
. : . : . : . : . : . :
rJMFF010H07- AATAAAGATGCAGTAATTGTAAAACCACGGAAGAACGAAGGTACTCCCAGTGTGCCCATT
rJMFF019P09- AATAAAGATGCAGTAATTGTAAAACCACGGAAGAACGAAGGTACTCCCAGTGTGCCCATT
rJMSF002K24- AATAAAGATGCAGTAATTGTAAAACCACGGAAGAACGAAGGTACTCCCAGTGTGCCCATT
rJMFF031G17- AATAAAGATGCAGTAATTGTAAAACCACGGAAGAACGAAGGTACTCCCAGTGTGCCCATT
rJMSF022J08- AATAAAGATGCAGTAATTGTAAAACCACGGAAGAACGAAGGTACTCCCAGTGTGCCCATT
____________________________________________________________
consensus AATAAAGATGCAGTAATTGTAAAACCACGGAAGAACGAAGGTACTCCCAGTGTGCCCATT
. : . : . : . : . : . :
rJMFF010H07- TACTCGACTGCAGAACATATCGAGCTAGTGCCTACCATGAACCTTCTGCACCAGATGTTG
rJMFF019P09- TACTCGACTGCAGAACATATCGAGCTAGTGCCTACCATGAACCTTCTGCACCAGATGTTG
rJMSF002K24- TACTCGACTGCAGAACATATCGAGCTAGTGCCTACCATGAACCTTCTGCACCAGATGTTG
rJMFF031G17- TACTCGACTGCAGAACATATCGAGCTAGTGCCTACCATGAACCTTCTGCACCAGATGTTG
rJMSF022J08- TACTCGACTGCAGAACATATCGAGCTAGTGCCTACCATGAACCTTCTGCACCAGATGTTG
____________________________________________________________
consensus TACTCGACTGCAGAACATATCGAGCTAGTGCCTACCATGAACCTTCTGCACCAGATGTTG
. : . : . : . : . : . :
rJMFF010H07- GATTCTCAAAAGCAGAGAAGCCCCAGTAGGTCTTTAATGAGTATGGTGGAAAAGACGTTG
rJMFF019P09- GATTCTCAAAAGCAGAGAAGCCCCAGTAGGTCTTTAATGAGTATGGTGGAAAAGACGTTG
rJMSF002K24- GATTCTCAAAAGCAGAGAAGCCCCAGTAGGTCTTTAATGAGTATGGTGGAAAAGACGTTG
rJMFF031G17- GATTCTCAAAAGCAGAGAAGCCCCAGTAGGTCTTTAATGAGTATGGTGGAAAAGACGTTG
rJMSF022J08- GATTCTCAAAAGCAGAGAAGCCCCAGTAGGTCTTTAATGAGTATGGTGGAAAAGACGTTG
____________________________________________________________
consensus GATTCTCAAAAGCAGAGAAGCCCCAGTAGGTCTTTAATGAGTATGGTGGAAAAGACGTTG
. : . : . : . : . : . :
rJMFF010H07- CACCCTCTTCTGTGATTTTCACTATCTGAATCTTGTTCACAGCAGACCTATCACGGTACA
rJMFF019P09- CACCCTCTTCTGTGATTTTCACTATCTGAATCTTGTTCACAGCAGACCTATCACGGTACA
rJMSF002K24- CACCCTCTTCTGTGATTTTCACTATCTGAATCTTGTTCACAGCAGACCTATCACGGTACA
rJMFF031G17- CACCCTCTTCTGTGATTTTCACTATCTGAATCTTGTTCACAGCAGACCTATCACGGTACA
rJMSF022J08- CACCCTCTTCTGTGATTTTCACTATCTGAATCTTGTTCACAGCAGACCTATCACGGTACA
JMSF022J08+ CTGAATCTTGTTCACAGCAGACCTATCACGGTACA
____________________________________________________________
consensus CACCCTCTTCTGTGATTTTCACTATCTGAATCTTGTTCACAGCAGACCTATCACGGTACA
. : . : . : . : . : . :
rJMFF010H07- AAAGCACACGCATGCATTTCTCCAGTAACTTGACACCTTCTTCAAAGCTCAAGTTTTCAT
rJMFF019P09- AAAGCACACGCATGCATTTCTCCAGTAACTTGACACCTTCTTCAAAGCTCAAGTTTTCAT
rJMSF002K24- AAAGCACACGCATGCATTTCTCCAGTAACTTGACACCTTCTTCAAAGCTCAAGTTTTCAT
rJMFF031G17- AAAGCACACGCATGCATTTCTCCAGTAACTTGACACCTTCTTCAAAGCTCAAGTTTTCAT
rJMSF022J08- AAAGCACACGCATGCATTTCTCCAGTAACTTGACACCTTCTTCAAAGCTCAAGTTTTCAT
JMSF022J08+ AAAGCACACGCATGCATTTCTCCAGTAACTTGACACCTTCTTCAAAGCTCAAGTTTTCAT
JMFF010H07+ TTCAAAGCTCAAGTTTTCAT
____________________________________________________________
consensus AAAGCACACGCATGCATTTCTCCAGTAACTTGACACCTTCTTCAAAGCTCAAGTTTTCAT
. : . : . : . : . : . :
rJMFF010H07- TCCATTCTTCACGCAGAATGGGTCGTGCAAGGTGATTCCCAAATCCAGTAGCCATATGGT
rJMFF019P09- TCCATTCTTCACGCAGAATGGGTCGTGCAAGGTGATTCCCAAATCCAGTAGCCATATGGT
rJMSF002K24- TCCATTCTTCACGCAGAATGGGTCGTGCAAGGTGATTCCCAAATCCAGTAGCCATATGGT
rJMFF031G17- TCCATTCTTCACGCAGAATGGGTCGTGCAAGGTGATTCCCAAATCCAGTAGCCATATGGT
rJMSF022J08- TCCATTCTTCACGCAGAATGGGTCGTGCAAGGTGATTCCCAAATCCAGTAGCCATATGGT
JMSF022J08+ TCCATTCTTCACGCAGAATGGGTCGTGCAAGGTGATTCCCAAATCCAGTAGCCATATGGT
JMFS150B06+ GTAGCCATATGGT
JMFF010H07+ TCCATTCTTCACGCAGAATGGGTCGTGCAAGGTGATTCCCAAATCCAGTAGCCATATGGT
JMFF019P09+ GGTGATTCCCAAATCCAGTAGCCATATGGT
____________________________________________________________
consensus TCCATTCTTCACGCAGAATGGGTCGTGCAAGGTGATTCCCAAATCCAGTAGCCATATGGT
. : . : . : . : . : . :
rJMFF010H07- TGTCCTCATAATGCACACCAATCATATTTACCGTTCCAAGATACTTTTGTCCGTTTTTCA
rJMFF019P09- TGTCCTCATAATGCACACCAATCATATTTACCGTTCCAAGATACTTTTGTCCGTTTTTCA
rJMSF002K24- TGTCCTCATAATGCACACCAATCATATTTACCGTTCCAAGATACTTTTGTCCGTTTTTCA
rJMFF031G17- TGTCCTCATAATGCACACCAATCATATTTACCGTTCCAAGATACTTTTGTCCGTTTTTCA
rJMSF022J08- TGTCCTCATAATGCACACCAATCATATTTACCGTTCCAAGATACTTTTGTCCGTTTTTCA
JMSF022J08+ TGTCCTCATAATGCACACCAATCATATTTACCGTTCCAAGATACTTTTGTCCGTTTTTCA
JMFS150B06+ TGTCCTCATAATGCACACCAATCATATTTACCGTTCCAAGATACTTTTGTCCGTTTTTCA
JMFF010H07+ TGTCCTCATAATGCACACCAATCATATTTACCGTTCCAAGATACTTTTGTCCGTTTTTCA
JMFF031G17+ ATCATATTTACCGTTCCAAGATACTTTTGTCCGTTTTTCA
JMFF019P09+ TGTCCTCATAATGCACACCAATCATATTTACCGTTCCAAGATACTTTTGTCCGTTTTTCA
____________________________________________________________
consensus TGTCCTCATAATGCACACCAATCATATTTACCGTTCCAAGATACTTTTGTCCGTTTTTCA
. : . : . : . : . : . :
rJMFF010H07- CACCACCAAGGATAAGGGAATTCCAAAGAGGGTTGAACTTATTGCGCCGATTATACATAA
rJMFF019P09- CACCACCAAGGATAAGGGAATTCCAAAGAGGGTTGAACTTATTGCGCCGATTATACATAA
rJMSF002K24- CACCACCAAGGATAAGGGAATTCCAAAGAGGGTTGAACTTATTGCGCCGATTATACATAA
rJMFF031G17- CACCACCAAGGATAAGGGAATTCCAAAGAGGGTTGAACTTATTGCGCCGATTATACATAA
rJMSF022J08- CACCACCAAGGATAAGGGAATTCCAAAGAGGGTTGAACTTATTGCGCCGATTATACATAA
JMSF022J08+ CACCACCAAGGATAAGGGAATTCCAAAGAGGGTTGAACTTATTGCGCCGATTATACATAA
JMFS150B06+ CACCACCAAGGATAAGGGAATTCCAAAGAGGGTTGAACTTATTGCGCCGATTATACATAA
JMFF010H07+ CACCACCAAGGATAAGGGAATTCCAAAGAGGGTTGAACTTATTGCGCCGATTATACATAA
JMFF031G17+ CACCACCAAGGATAAGGGAATTCCAAAGAGGGTTGAACTTATTGCGCCGATTATACATAA
JMFF019P09+ CACCACCAAGGATAAGGGAATTCCAAAGAGGGTTGAACTTATTGCGCCGATTATACATAA
____________________________________________________________
consensus CACCACCAAGGATAAGGGAATTCCAAAGAGGGTTGAACTTATTGCGCCGATTATACATAA
. : . : . : . : . : . :
rJMFF010H07- CTCGGGTAAGATAATTGTGAACTTCCTTGGGACCCAATGAATTTCCATCATCCCACATAT
rJMFF019P09- CTCGGGTAAGATAATTGTGAACTTCCTTGGGACCCAATGAATTTCCATCATCCCACATAT
rJMSF002K24- CTCGGGTAAGATAATTGTGAACTTCCTTGGGACCCAATGAATTTCCATCATCCCACATAT
rJMFF031G17- CTCGGGTAAGATAATTGTGAACTTCCTTGGGACCCAATGAATTTCCATCATCCCACATAT
rJMSF022J08- CTCGGGTAAGATAATTGTGAACTTCCTTGGGACCCAATGAATTTCCATCATCCCACATAT
JMSF022J08+ CTCGGGTAAGATAATTGTGAACTTCCTTGGGACCCAATGAATTTCCATCATCCCACATAT
JMFS150B06+ CTCGGGTAAGATAATTGTGAACTTCCTTGGGACCCAATGAATTTCCATCATCCCACATAT
JMFF010H07+ CTCGGGTAAGATAATTGTGAACTTCCTTGGGACCCAATGAATTTCCATCATCCCACATAT
JMFF031G17+ CTCGGGTAAGATAATTGTGAACTTCCTTGGGACCCAATGAATTTCCATCATCCCACATAT
JMFF019P09+ CTCGGGTAAGATAATTGTGAACTTCCTTGGGACCCAATGAATTTCCATCATCCCACATAT
____________________________________________________________
consensus CTCGGGTAAGATAATTGTGAACTTCCTTGGGACCCAATGAATTTCCATCATCCCACATAT
. : . : . : . : . : . :
rJMFF010H07- TATCATTTAAGATAAGCTCGTCAAGGTAGCGCAAGATCTCTTGGAAATCACTAATCTCAC
rJMFF019P09- TATCATTTAAGATAAGCTCGTCAAGGTAGCGCAAGATCTCTTGGAAATCACTAATCTCAC
rJMSF002K24- TATCATTTAAGATAAGCTCGTCAAGGTAGCGCAAGATCTCTTGGAAATCACTAATCTCAC
rJMFF031G17- TATCATTTAAGATAAGCTCGTCAAGGTAGCGCAAGATCTCTTGGAAATCACTAATCTCAC
rJMSF022J08- TATCATTTAAGATAAGCTCGTCAAGGTAGCGCAAGATCTCTTGGAAATCACTAATCTCAC
JMSF022J08+ TATCATTTAAGATAAGCTCGTCAAGGTAGCGCAAGATCTCTTGGAAATCACTAATCTCAC
JMFS150B06+ TATCATTTAAGATAAGCTCGTCAAGGTAGCGCAAGATCTCTTGGAAATCACTAATCTCAC
JMFF010H07+ TATCATTTAAGATAAGCTCGTCAAGGTAGCGCAAGATCTCTTGGAAATCACTAATCTCAC
JMFF031G17+ TATCATTTAAGATAAGCTCGTCAAGGTAGCGCAAGATCTCTTGGAAATCACTAATCTCAC
JMFF019P09+ TATCATTTAAGATAAGCTCGTCAAGGTAGCGCAAGATCTCTTGGAAATCACTAATCTCAC
____________________________________________________________
consensus TATCATTTAAGATAAGCTCGTCAAGGTAGCGCAAGATCTCTTGGAAATCACTAATCTCAC
. : . : . : . : . : . :
rJMFF010H07- CACTTGCAC
rJMFF019P09- CACTTGCACCAACCAATGGAGTGTTTCCCAACAGGCTTCAGTCGCTCCACACTCTTGTAA
rJMSF002K24- CACTTGCACCAA-CAATGGAGTGNTTCCCAACAGGCTTCAGTCGCTCCACACTCTTGTAA
rJMFF031G17- CACTTGCACCAA-CAATGGAGTGTTTCCCAACAGGCTTCAGTCGCTCCACACTCTTGTAA
rJMSF022J08- CACTTGCACCAA-CAATGGAGTGTTTCCCAACAGGCTTCAGTCGCTCCACACTCTTGTAA
JMSF022J08+ CACTTGCACCAA-CAATGGAGTGTTTCCCAACAGGCTTCAGTCGCTCCACACTCTTGTAA
JMFS150B06+ CACTTGCACCAA-CAATGGAGTGTTTCCCAACAGGCTTCAGTCGCTCCACACTCTTGTAA
JMFF010H07+ CACTTGCACCAA-CAATGGAGTGTTTCCCAACAGGCTTCAGTCGCTCCACACTCTTGTAA
JMFF031G17+ CACTTGCACCAA-CAATGGAGTGTTTCCCAACAGGCTTCAGTCGCTCCACACTCTTGTAA
JMFF019P09+ CACTTGCACCAA-CAATGGAGTGTTTCCCAACAGGCTTCAGTCGCTCCACACTCTTGTAA
JMSF002K24+ AATGGAGTGTTTCCCAACAGGCTTCAGTCGCTCCACACTCTTGTAA
____________________________________________________________
consensus CACTTGCACCAA-CAATGGAGTGTTTCCCAACAGGCTTCAGTCGCTCCACACTCTTGTAA
. : . : . : . : . : . :
rJMFF019P09- CGCAAAG
rJMSF002K24- CGCAAAGT
rJMFF031G17- CGCAAAGTGGATCCATAAGATCCTCCCATATCAGCAACCAA
rJMSF022J08- CGCAAAGTGGATCCATAAGATCCTCCCATATCAGCAACCAAAAGAACACCATCCTTGTAT
JMSF022J08+ CGCAAAGTGGATCCATAAGATCCTCCCATATCAGCAACCAAAAGAACACCATCCTTGTAT
JMFS150B06+ CGCAAAGTGGATCCATAAGATCCTCCCATATCAGCAACCAAAAGAACACCATCCTTGTAT
JMFF010H07+ CGCAAAGTGGATCCATAAGATCCTCCCATATCAGCAACCAAAAGAACACCATCCTTGTAT
JMFF031G17+ CGCAAAGTGGATCCATAAGATCCTCCCATATCAGCAACCAAAAGAACACCATCCTTGTAT
JMFF019P09+ CGCAAAGTGGATCCATAAGATCCTCCCATATCAGCAACCAAAAGAACACCATCCTTGTAT
JMSF002K24+ CGCAAAGTGGATCCATAAGATCCTCCCATATCAGCAACCAAAAGAACACCATCCTTGTAT
____________________________________________________________
consensus CGCAAAGTGGATCCATAAGATCCTCCCATATCAGCAACCAAAAGAACACCATCCTTGTAT
. : . : . : . : . : . :
rJMSF022J08- TTAA
JMSF022J08+ TTAATGCCAACCACTGAAGTGCCTGTCACATATGGGTACAGAGTTCTTTGAGAATCGCTC
JMFS150B06+ TTAATGCCAACCACTGAAGTGCCTGTCACATATGGGTACAGAGTTCTTTGAGAATCGCTC
JMFF010H07+ TTAATGCCAACCACTGAAGTGCCTGTCACATATGGGTACAGAGTTCTTTGAGAATCGCTC
JMFF031G17+ TTAATGCCAACCACTGAAGTGCCTGTCACATATGGGTACAGAGTTCTTTGAGAATCGCTC
JMFF019P09+ TTAATGCCAACCACTGAAGTGCCTGTCACATATGGGTACAGAGTTCTTTGAGAATCGCTC
JMSF002K24+ TTAATGCCAACCACTGAAGTGCCTGTCACATATGGGTACAGAGTTCTTTGAGAATCGCTC
____________________________________________________________
consensus TTAATGCCAACCACTGAAGTGCCTGTCACATATGGGTACAGAGTTCTTTGAGAATCGCTC
. : . : . : . : . : . :
JMSF022J08+ TGTGAACCAAGTAAGCTGCTCTGAGCCGGAGTAGTAGAATCCATCATATTCATCATCGAG
JMFS150B06+ TGTGAACCAAGTAAGCTGCTCTGAGCCGGAGTAGTAGAATCCATCATATTCATCATCGAG
JMFF010H07+ TGTGAACCAAGTAAGCTGCTCTGAGCCGGAGTAGTAGAATCCATCATATTCATCATCGAG
JMFF031G17+ TGTGAACCAAGTAAGCTGCTCTGAGCCGGAGTAGTAGAATCCATCATATTCATCATCGAG
JMFF019P09+ TGTGAACCAAGTAAGCTGCTCTGAGCCGGAGTAGTAGAATCCATCATATTCATCATCGAG
JMSF002K24+ TGTGAACCAAGTAAGCTGCTCTGAGCCGGAGTAGTAGAATCCATCATATTCATCATCGAG
____________________________________________________________
consensus TGTGAACCAAGTAAGCTGCTCTGAGCCGGAGTAGTAGAATCCATCATATTCATCATCGAG
. : . : . : . : . : . :
JMSF022J08+ AATGCGCTGAAACG
JMFS150B06+ AATGCGCTGAAACGTCTAGATCGAGAATGCTAAGTGACCGATAT
JMFF010H07+ AATGCGCTGAAACGTCTAGATCGAGAATGCTAAGTGACCGATATTTTTACCCTTTTCTGC
JMFF031G17+ AATGCGCTGAAACGTCTAGATCGAGAATGCTAAGTGACCGATATTTTTACCCTTTTCTGC
JMFF019P09+ AATGCGCTGAAACGTCTAGATCGAGAATGCTAAGTGACCGATATTTTTACCCTTTTCTGC
JMSF002K24+ AATGCGCTGAAACGTCTAGATCGAGAATGCTAAGTGACCGATATTTTTACCCTTTTCTGC
____________________________________________________________
consensus AATGCGCTGAAACGTCTAGATCGAGAATGCTAAGTGACCGATATTTTTACCCTTTTCTGC
. : . : . : . : . : . :
JMFF010H07+ TTTTC
JMFF031G17+ TTTTCCCCTTGCTCAAGTCTCAAGAAAGAAAATAAAAGAACGGAG
JMFF019P09+ TTTTCCCCTTGCTCAAGTCTCAAGAAAGAAAATAAAAGAACGGAG
JMSF002K24+ TTTTCCCCTTGCTCAAGTCTCAAGAAAGAAAATAAAAGAACGGAGAGAACAACGGACTCC
____________________________________________________________
consensus TTTTCCCCTTGCTCAAGTCTCAAGAAAGAAAATAAAAGAACGGAGAGAACAACGGACTCC