| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMSF009N05 | Sequence | 382 | 002120 (8) | ref|XP_009767239.1| | 1e-16 | PREDICTED: photosystem II stability/assembly factor HCF136, chloroplastic [Nico | 494 | 002120 (8) | gb|KDO52758.1| | 7e-38 | hypothetical protein CISIN_1g0363872mg, partial [Citrus sinensis] |
| JMSF024K19 | Sequence | 669 | 002120 (8) | ref|XP_009767239.1| | 1e-96 | PREDICTED: photosystem II stability/assembly factor HCF136, chloroplastic [Nico | 173 | 002120 (8) | gb|EYU35585.1| | 2e-08 | hypothetical protein MIMGU_mgv1a0077291mg, partial [Erythranthe guttata] |
| JMSF052L21 | Sequence | 634 | 002120 (8) | ref|XP_009767239.1| | 4e-88 | PREDICTED: photosystem II stability/assembly factor HCF136, chloroplastic [Nico | 914 | 002120 (8) | ref|XP_011075300.1| | 8e-144 | PREDICTED: photosystem II stability/assembly factor HCF136, chloroplastic isofo |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig002120============================================1459 41 ------------------------->JMSF009N05 <---------------------------------rJMSF009N05 53 ------------------------------------------>JMSF052L21 <-----------------------------------------------------------rJMSF052L21 248 --------------------------------------------->JMSF024K19 <-----------rJMSF024K19
The following clones don't have the opposite end in this pair.
---------------------------->JMSF011F13# -------------------------------------------->JMSF027A12#