clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF032B03 | Sequence | 555 | 012112 (6) | ref|XP_011091432.1| | 8e-93 | PREDICTED: myb family transcription factor APL-like isoform X2 [Sesamum indicum | 679 | 012112 (6) | ref|XP_008380567.1| | 5e-53 | PREDICTED: myb family transcription factor APL isoform X2 [Malus domestica] |
JMSF008B11 | Sequence | 256 | 012112 (6) | 473 | 012112 (6) | gb|KDO61177.1| | 4e-10 | hypothetical protein CISIN_1g021481mg [Citrus sinensis] | |||
JMSF039B08 | Sequence | 638 | 012112 (6) | ref|XP_011091432.1| | 2e-109 | PREDICTED: myb family transcription factor APL-like isoform X2 [Sesamum indicum | 815 | 012112 (6) | ref|XP_002300173.2| | 4e-86 | myb family transcription factor family protein [Populus trichocarpa] gb|EEE84978 |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig012112============================================1070 35 ----------------------------------------------------------->JMSF039B08 <-------------------------------------------------------------------------rJMSF039B08 36 --------------------------------------------------->JMFF032B03 <-------------------------------------------------------------rJMFF032B03 598 ----------------------->JMSF008B11 <-------------------------------------------rJMSF008B11
The following clones don't have the opposite end in this pair.