clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMCP001E05 | Sequence | 553 | 008694 (9) | ref|XP_010680512.1| | 4e-72 | PREDICTED: polyadenylate-binding protein 2 [Beta vulgaris subsp. vulgaris] | |||||
JMFN020C20 | Sequence | 659 | 008694 (9) | ref|XP_007205858.1| | 8e-116 | hypothetical protein PRUPE_ppa011157mg [Prunus persica] ref|XP_008234985.1| PRED | |||||
JMFS020H06 | Sequence | 623 | 008694 (9) | ref|XP_007205858.1| | 5e-106 | hypothetical protein PRUPE_ppa011157mg [Prunus persica] ref|XP_008234985.1| PRED | |||||
JMSF008N22 | Sequence | 299 | 008694 (9) | ref|XP_002267022.2| | 2e-21 | PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera] emb|CBI25873.3| unna | 742 | 008694 (9) | ref|XP_009344451.1| | 2e-74 | PREDICTED: polyadenylate-binding protein 2 isoform X1 [Pyrus x bretschneideri] |
JMSF011I07 | Sequence | 255 | 008694 (9) | ref|XP_010041320.1| | 2e-18 | PREDICTED: polyadenylate-binding protein 2-like isoform X1 [Eucalyptus grandis] | 746 | 008694 (9) | ref|XP_009344451.1| | 2e-98 | PREDICTED: polyadenylate-binding protein 2 isoform X1 [Pyrus x bretschneideri] |
JMSF047G06 | Sequence | 659 | 008694 (9) | ref|XP_007205858.1| | 3e-118 | hypothetical protein PRUPE_ppa011157mg [Prunus persica] ref|XP_008234985.1| PRED | 783 | 008694 (9) | ref|XP_007205858.1| | 9e-111 | hypothetical protein PRUPE_ppa011157mg [Prunus persica] ref|XP_008234985.1| PRED |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig008694============================================1059 52 --------------------------->JMSF008N22 <---------------------------------------------------------------rJMSF008N22 185 ----------------------->JMSF011I07 <---------------------------------------------------------------------rJMSF011I07 185 -------------------------------------------------------------->JMSF047G06 <--------------------------------------------------------------------------rJMSF047G06
The following clones don't have the opposite end in this pair.
------------------------------------------------------------->JMFN020C20- ---------------------------------------------------------->JMFS020H06- --------------------------------------------------->rJMCP001E05-