List of clones in pair P016230.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026A21Sequence576005660 (9)emb|CDP09356.1|2e-55unnamed protein product [Coffea canephora]755005660 (9)ref|XP_009783713.1|6e-85PREDICTED: 50S ribosomal protein L27, chloroplastic-like [Nicotiana sylvestris]
JMFF043O05Sequence634005660 (9)ref|XP_009783713.1|3e-86PREDICTED: 50S ribosomal protein L27, chloroplastic-like [Nicotiana sylvestris]
JMFF046K18Sequence548005660 (9)ref|XP_010088919.1|8e-4750S ribosomal protein L27 [Morus notabilis] gb|EXB37123.1| 50S ribosomal protein503005660 (9)ref|XP_009783713.1|2e-67PREDICTED: 50S ribosomal protein L27, chloroplastic-like [Nicotiana sylvestris]
JMSF046C02Sequence538005660 (9)ref|XP_004245259.1|3e-76PREDICTED: 50S ribosomal protein L27, chloroplastic-like [Solanum lycopersicum]761005660 (9)ref|XP_009783713.1|1e-83PREDICTED: 50S ribosomal protein L27, chloroplastic-like [Nicotiana sylvestris]

Contig 5660 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig005660============================================ 934         
 179 ------------------------------------------------------------>JMFF046K18                                          
                                                <-------------------------------------rJMFF046K18  
 179 --------------------------------------------------------------->JMFF026A21                                       
                                   <--------------------------------------------------rJMFF026A21  
 334                 ------------------------------------------------------->JMSF046C02                               
                      <---------------------------------------------------------------rJMSF046C02  

The following clones don't have the opposite end in this pair.

                                   <-----------------------------------------------------------rJMSF051M09#           
                                ------------------------------------------------------>JMFF043O05-                    
                                   <---------------------------------------------------------------------rJMSF017E21*