clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF029O07 | Sequence | 410 | 005450 (8) | emb|CDP14659.1| | 7e-24 | unnamed protein product [Coffea canephora] | 751 | 005450 (8) | ref|XP_009776091.1| | 244 | PREDICTED: uncharacterized protein LOC104225913 [Nicotiana sylvestris] ref|XP_00 |
JMSF005P07 | Sequence | 369 | 005450 (8) | ||||||||
JMSF017P16 | Sequence | 425 | 005450 (8) | ref|XP_009617738.1| | 119 | PREDICTED: uncharacterized protein LOC104110026 [Nicotiana tomentosiformis] | 733 | 005450 (8) | ref|XP_009776091.1| | 249 | PREDICTED: uncharacterized protein LOC104225913 [Nicotiana sylvestris] ref|XP_00 |
JMSF046F12 | Sequence | 759 | 005450 (8) | ref|XP_009776091.1| | 237 | PREDICTED: uncharacterized protein LOC104225913 [Nicotiana sylvestris] ref|XP_00 | 739 | 005450 (8) | ref|XP_009776091.1| | 242 | PREDICTED: uncharacterized protein LOC104225913 [Nicotiana sylvestris] ref|XP_00 |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig005450============================================1322 172 --------------------->JMFF029O07 <------------------------------------------------------rJMFF029O07 203 ---------->JMSF017P16 <----------------------------------------------------rJMSF017P16 428 -------------------------------------------------->JMSF046F12 <-----------------------------------rJMSF046F12
The following clones don't have the opposite end in this pair.
----------------------->rJMSF005P07- <--------JMSF005P05*