clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF015M05 | Sequence | 627 | 004534 (8) | gb|ADE76178.1| | 3e-87 | unknown [Picea sitchensis] | 727 | 004534 (8) | ref|XP_009607335.1| | 352 | PREDICTED: aspartate-semialdehyde dehydrogenase [Nicotiana tomentosiformis] |
JMFF019N02 | Sequence | 573 | 004534 (8) | gb|ADE76178.1| | 4e-56 | unknown [Picea sitchensis] | 762 | 004534 (8) | ref|XP_004228744.1| | 369 | PREDICTED: aspartate-semialdehyde dehydrogenase [Solanum lycopersicum] |
JMSF012C08 | Sequence | 440 | 004534 (8) | ref|XP_011070557.1| | 161 | PREDICTED: aspartate-semialdehyde dehydrogenase [Sesamum indicum] | 719 | 004534 (8) | ref|XP_009607335.1| | 348 | PREDICTED: aspartate-semialdehyde dehydrogenase [Nicotiana tomentosiformis] |
JMSF046H10 | Sequence | 799 | 004534 (8) | gb|EYU30142.1| | 8e-120 | hypothetical protein MIMGU_mgv1a009387mg [Erythranthe guttata] | 894 | 004534 (8) | ref|XP_009607335.1| | 405 | PREDICTED: aspartate-semialdehyde dehydrogenase [Nicotiana tomentosiformis] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig004534============================================1380 1 ---------------------------------------->JMFF019N02 <------------------------------------------------------rJMFF019N02 329 ----------------->JMSF012C08 <-----------------------------------------rJMSF012C08 329 ---------------------------------->JMFF015M05 <-----------------------------------------rJMFF015M05 329 ---------------------------------------------->JMSF046H10 <------------------------------------------------------rJMSF046H10
The following clones don't have the opposite end in this pair.