| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF015M05 | Sequence | 627 | 004534 (8) | gb|ADE76178.1| | 3e-87 | unknown [Picea sitchensis] | 727 | 004534 (8) | ref|XP_009607335.1| | 352 | PREDICTED: aspartate-semialdehyde dehydrogenase [Nicotiana tomentosiformis] |
| JMFF019N02 | Sequence | 573 | 004534 (8) | gb|ADE76178.1| | 4e-56 | unknown [Picea sitchensis] | 762 | 004534 (8) | ref|XP_004228744.1| | 369 | PREDICTED: aspartate-semialdehyde dehydrogenase [Solanum lycopersicum] |
| JMSF012C08 | Sequence | 440 | 004534 (8) | ref|XP_011070557.1| | 161 | PREDICTED: aspartate-semialdehyde dehydrogenase [Sesamum indicum] | 719 | 004534 (8) | ref|XP_009607335.1| | 348 | PREDICTED: aspartate-semialdehyde dehydrogenase [Nicotiana tomentosiformis] |
| JMSF046H10 | Sequence | 799 | 004534 (8) | gb|EYU30142.1| | 8e-120 | hypothetical protein MIMGU_mgv1a009387mg [Erythranthe guttata] | 894 | 004534 (8) | ref|XP_009607335.1| | 405 | PREDICTED: aspartate-semialdehyde dehydrogenase [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMFF019N02- ACTTTGGATAAAATATAAGGACAATCTAATCTTCAAGGCTCAAGCTAATGGTAAGTTTTA
____________________________________________________________
consensus ACTTTGGATAAAATATAAGGACAATCTAATCTTCAAGGCTCAAGCTAATGGTAAGTTTTA
. : . : . : . : . : . :
rJMFF019N02- CACGCAAAGAAATATGGGCGGCCATCCATCCATCCGTGAACTCAACACTGGGCTTGTAAG
____________________________________________________________
consensus CACGCAAAGAAATATGGGCGGCCATCCATCCATCCGTGAACTCAACACTGGGCTTGTAAG
. : . : . : . : . : . :
rJMFF015M05- TATAGCAGCTTCTCTGCAATCT
rJMFF019N02- GGAAAAATTCCTTGATGCTATTCCGTTCTCAACTTCCTTATAGCAGCTTCTCTGCAATTT
rJMSF012C08- TATAGCAGCTTCTCTGCAATCT
rJMSF046H10- TATAGCAGCTTCTCTGCAATCT
____________________________________________________________
consensus GGAAAAATTCCTTGATGCTATTCCGTTCTCAACTTCCTTATAGCAGCTTCTCTGCAATCT
. : . : . : . : . : . :
rJMFF015M05- GAACAGCGTTAAGGGCAGCTCCCTTGCGTATTTGATCACCACAGACAAAGATGTCCAACC
rJMFF019N02- GCACAGCATTAAGGGCAGCTCCTTTGCGAATTTGGTCGCCACAAACAAAGATGTCCAACC
rJMSF012C08- GAACAGCGTTAAGGGCAGCTCCCTTGCGTATTTGATCACCACAGACAAAGATGTCCAACC
rJMSF046H10- GAACAGCGTTAAGGGCAGCTCCCTTGCGTATTTGATCACCACAGACAAAGATGTCCAACC
____________________________________________________________
consensus GAACAGCGTTAAGGGCAGCTCCCTTGCGTATTTGATCACCACAGACAAAGATGTCCAACC
. : . : . : . : . : . :
rJMFF015M05- CGTAGTCCCCATCTTGGGAAATGTCACGTCGTATCCTCCCAACTGCAACGTCGTCTTTGT
rJMFF019N02- CATAGTCACCGTCTTGGGAAACATCGCGGCGTATCCTCCCAACTGCAACATCATCTTTGT
rJMSF012C08- CGTAGTCCCCATCTTGGGAAATGTCACGTCGTATCCTCCCAACTGCAACGTCGTCTTTGT
rJMSF046H10- CGTAGTCCCCATCTTGGGAAATGTCACGTCGTATCCTCCCAACTGCAACGTCGTCTTTGT
____________________________________________________________
consensus CGTAGTCCCCATCTTGGGAAATGTCACGTCGTATCCTCCCAACTGCAACGTCGTCTTTGT
. : . : . : . : . : . :
rJMFF015M05- TGGAAACTTCGAGTGGGGTGGGAAATCTGTTTGCAGCTCGATCATCAACGACTACTATGC
rJMFF019N02- TAGACACTTCCAATGGGGTGGGAAACCTATTGGCAGCTCGATCATCAACCACCACTACAC
rJMSF012C08- TGGAAACTTCGAGTGGGGTGGGAAATCTGTTTGCAGCTCGATCATCAACGACTACTATGC
rJMSF046H10- TGGAAACTTCGAGTGGGGTGGGAAATCTGTTTGCAGCTCGATCATCAACGACTACTATGC
____________________________________________________________
consensus TGGAAACTTCGAGTGGGGTGGGAAATCTGTTTGCAGCTCGATCATCAACGACTACTATGC
. : . : . : . : . : . :
rJMFF015M05- CCGGTGCATTCTTGAGAATATCCTTAGCCGTCTCCTCATCGAGGGGTTTCTCAAATTGAA
rJMFF019N02- CGGGTGCCCTCGACAGAATTTCCCTTGCCGTCTCCTCGTCAAGAGGATTCTCAAATTGAA
rJMSF012C08- CCGGTGCATTCTTGAGAATATCCTTAGCCGTCTCCTCATCGAGGGGTTTCTCAAATTGAA
rJMSF046H10- CCGGTGCATTCTTGAGAATATCCTTAGCCGTCTCCTCATCGAGGGGTTTCTCAAATTGAA
____________________________________________________________
consensus CCGGTGCATTCTTGAGAATATCCTTAGCCGTCTCCTCATCGAGGGGTTTCTCAAATTGAA
. : . : . : . : . : . :
rJMFF015M05- GATTCACACTCTCGGCATGAGCACGCATAACTGGAACTCGTATGCACGTTGCCGTCACTT
rJMFF019N02- GATTCACACTCTCTGCATGTGCACGCATAACAGGAACTCTAATACACGTTGCTGTGACTT
rJMSF012C08- GATTCACACTCTCGGCATGAGCACGCATAACTGGAACTCGTATGCACGTTGCCGTCACTT
rJMSF046H10- GATTCACACTCTCGGCATGAGCACGCATAACTGGAACTCGTATGCACGTTGCCGTCACTT
____________________________________________________________
consensus GATTCACACTCTCGGCATGAGCACGCATAACTGGAACTCGTATGCACGTTGCCGTCACTT
. : . : . : . : . : . :
rJMFF015M05- TAACATCCTTGTCGTTCCATATTCTCCTAGTCTCTTTTACCAATTTCATCTCCTCTTCAT
rJMFF019N02- TAACCTCTCCATCATTCCATATCTTCCTTGTCTCTTTCACCAATTTCATCTCCTCTTCAT
rJMSF012C08- TAACATCCTTGTCGTTCCATATTTTCCTAGTCTCTTTTACCAATTTCATCTCCTCTTCAT
rJMSF046H10- TAACATCCTTGTCGTTCCATATTTTCCTAGTCTCTTTTACCAATTTCATCTCCTCTTCAT
____________________________________________________________
consensus TAACATCCTTGTCGTTCCATATTTTCCTAGTCTCTTTTACCAATTTCATCTCCTCTTCAT
. : . : . : . : . : . :
rJMFF015M05- TGTAACCATTTGATTGAATAGATGCATTATGTGAGAATAGGTTGAAAGCATACTGCTGCT
rJMFF019N02- TATACCCATTTGATTGAACAGGTGCATTATGCGAGAACAGATTGAAAGCATACTGCTGTG
rJMSF012C08- TGTAACCATTTGATTGAATAGATGCATTATGTGAGAATAGGTTGAAAGCATACTGCTGCT
rJMSF046H10- TGTAACCATTTGATTGAATAGATGCATTATGTGAGAATAGGTTGAAAGCATACTGCTGCT
JMSF046H10+ AATAGATGCATTATGTGAGAATAGGTTGAAAGCATACTGCTGCT
____________________________________________________________
consensus TGTAACCATTTGATTGAATAGATGCATTATGTGAGAATAGGTTGAAAGCATACTGCTGCT
. : . : . : . : . : . :
rJMFF015M05- TAAAGATGTTACAGGTTGGTTCTTTCCCTTCTAAGAC---CTCACGAGTCTGCAAAACAA
rJMFF019N02- TGAAGATGTTACAAGTTGGTTCTTTCCCATCTAATAC---CTCACGAGTCTGCTGAACAA
rJMSF012C08- TAAAGATGTTACAGGTTGGTTCTTTCCCTTCTAAGACCTACTCACGAGTCTGCAAAACAA
rJMSF046H10- TAAAGATGTTACAGGTTGGTTCTTTCCCTTCTAAGAC---CTCACGAGTCTGCAAAACAA
JMSF046H10+ TAAAGATGTTACAGGTTGGTTCTTTCCCTTTTAAGAC---CTCACGAGTCTGCAAAACAA
____________________________________________________________
consensus TAAAGATGTTACAGGTTGGTTCTTTCCCTTCTAAGAC---CTCACGAGTCTGCAAAACAA
. : . : . : . : . : . :
rJMFF015M05- GCTCTTCCATGGCTGCAGCACCAGCCCCACTGGCAGCCTGGTATGTGCTAACGACCATAC
rJMFF019N02- GCTCTTCCATGGCTGCAGCTCCAGCACCACTAGCAGCCTGGTACGTACTAACAACCATCC
rJMSF012C08- GCTCTTCCATGGCTGCAGCACCAGCCCCACTGGCAGCCTGGTATGTGCTAACGACCATAC
rJMSF046H10- GCTCTTCCATGGCTGCAGCACCAGCCCCACTGGCAGCCTGGTATGTGCTAACGACCATAC
JMSF046H10+ GCTCTTCCATGGCTGCAGCACCAGCCCCACTGGCAGCCTGGTATGTGCTAACGACCATAC
____________________________________________________________
consensus GCTCTTCCATGGCTGCAGCACCAGCCCCACTGGCAGCCTGGTATGTGCTAACGACCATAC
. : . : . : . : . : . :
rJMFF015M05- GTTTAACCTTAGC
rJMFF019N02- TCTTAACCTTAGCGCGGCGATGAAGCGGGGTGGCAGCCATTAAGC
rJMSF012C08- GTTTAACCTTAGC
rJMSF046H10- GTTTAACCTTAGCCCGGAGATGAAGCGGCGTGGCGGCCATTAAGCAAATAATGGTGGAGC
JMFF015M05+ AGCCCGGAGATGAAGCGGCGTGGCGGCCATTAAGCAAATAATGGTGGAGC
JMSF046H10+ GTTTAACCTTAGCCCGGAGATGAAGCGGCGTGGCGGCCATTAAGCAAATAATGGTGGAGC
____________________________________________________________
consensus GTTTAACCTTAGCCCGGAGATGAAGCGGCGTGGCGGCCATTAAGCAAATAATGGTGGAGC
. : . : . : . : . : . :
rJMSF046H10- AATTGGGATTGGCAATGATCGCTCCCTTCCCAGA-CCGACCTTAATATGCGCCATGGCGT
JMFF015M05+ AATTGGGATTGGCAATGATCGCTCACTTCCCAGACCCGACCTTAATATGCGCCATGGCGT
JMSF046H10+ AATTGGGATTGGCAATGATCGCTCCCTTCCCAGACCCGACCTTAATATGCGCCATGGCGT
JMFF019N02+ CCAGAACCGAGCTTGATATGCGCCATTGCCT
____________________________________________________________
consensus AATTGGGATTGGCAATGATCGCTCCCTTCCCAGACCCGACCTTAATATGCGCCATGGCGT
. : . : . : . : . : . :
rJMSF046H10- CTGGATTAACCTCCGGGATCACTAGCGGCACGCCATCGTCCATCCTAAAAGCAGAGCTGT
JMFF015M05+ CTGGATTAACCTCCGGGATCACTAGCGGCACGCCATCGTCCATCCTAAAAGCAGAGCTGT
JMSF046H10+ CTGGATTAACCTCCGGGATCACTAGCGGCACGCCATCGTCCATCCTAAAAGCAGAGCTGT
JMFF019N02+ CGGGATTGACCTCCGGGATCACGAGCGGCACTCCCTCGTCCATACGAAAAGCAGAGCTAT
____________________________________________________________
consensus CTGGATTAACCTCCGGGATCACTAGCGGCACGCCATCGTCCATCCTAAAAGCAGAGCTGT
. : . : . : . : . : . :
rJMSF046H10- TATCCACCACAA
JMFF015M05+ TATCCACCACAATGGTCCCCTTCCGAGCCGCTATCGGGCCAAATTTCTTACTAATAGACC
JMSF046H10+ TATCCACCACAATGGTCCCCTTCCGAGCCGCTATCGGGCCAAATTTCTTACTAATAGACC
JMFF019N02+ TATCTACAACAACGGTCCCCTTCTGGACCGCTACCGGCCCAAACTTCTTGCTAATAGAT-
____________________________________________________________
consensus TATCCACCACAATGGTCCCCTTCCGAGCCGCTATCGGGCCAAATTTCTTACTAATAGACC
. : . : . : . : . : . :
JMFF015M05+ CGCCGGCGCTGAACAGAGCAATGTCGACGCCTTCAAAGCTTTCCTCGGTGAGCTCTTCGA
JMSF046H10+ CGCCGGCGCTGAACAGAGCAATGTCGACGCCTTCAAAGCTTTCCTCGGTGAGCTCTTCGA
JMSF012C08+ CCGGCGCTGAACAGAGCAATGTCGACGCCTTCAAAGCTTTCCTCGGTGAGCTCTTCGA
JMFF019N02+ -ACCGGCGCTGAATAACGCAATGTCTACTCCTTCAAAGCTATCATCCGTGAGCTCCTCAA
____________________________________________________________
consensus CGCCGGCGCTGAACAGAGCAATGTCGACGCCTTCAAAGCTTTCCTCGGTGAGCTCTTCGA
. : . : . : . : . : . :
JMFF015M05+ CGGTGTACTGCTTGCCTTCGAAGGCGAGGCCCCTCCCCGCGGAGCGCTTGCTGGCGAGGA
JMSF046H10+ CGGTGTACTGCTTGCCTTCGAAGGCGAGGCCCCTCCCCGCGGAGCGCTTGCTGGCGAGGA
JMSF012C08+ CGGTGTACTGCTTGCCTTCGAAGGCGAGGCCCCTCCCCGCGGAGCGCTTGCTGGCGAGGA
JMFF019N02+ CGGTGTATTGCTTGCCCTCGAAGATGAGGTTCCTGCCAGCGGAGCGTTTGCTGGCTAGGA
____________________________________________________________
consensus CGGTGTACTGCTTGCCTTCGAAGGCGAGGCCCCTCCCCGCGGAGCGCTTGCTGGCGAGGA
. : . : . : . : . : . :
JMFF015M05+ GCTTGAGGGAGCGGTACGGGAAGTCGCGGTCGGAGAGGACGGAGAGAAACTCCTGGCCCA
JMSF046H10+ GCTTGAGGGAGCGGTACGGGAAGTCGCGGTCGGAGAGGACGGAGAGAAACTCCTGGCCCA
JMSF012C08+ GCTTGAGGGAGCGGTACGGGAAGTCGCGGTCGGAGAGGACGGAGAGAAACTCCTGGCCCA
JMFF019N02+ GCTTGAGGGAACGGTAAGGGAAGTCGCGGTCGGAGAGAACGGAGAGGAACTCTTGGCCTA
____________________________________________________________
consensus GCTTGAGGGAGCGGTACGGGAAGTCGCGGTCGGAGAGGACGGAGAGAAACTCCTGGCCCA
. : . : . : . : . : . :
JMFF015M05+ CGGCGCCGGTGACGCCGACGATGGCGACTGAGGGGGCGTCCTCACGAAGCGACATGCGGA
JMSF046H10+ CGGCGCCGGTGACGCCGACGATGGCGACTGAGGGGGCGTCCTCACGAAGCGACATGCGGA
JMSF012C08+ CGGCGCCGGTGACGCCGACGATGGCGACTGAGGGGGCGTCCTCACGAAGCGACATGCGGA
JMFF019N02+ CGGCGCCAGTCACTCCGACAATGGCGACGGAAGGGGCGTCTTCGCGAAGGGACATACGGA
____________________________________________________________
consensus CGGCGCCGGTGACGCCGACGATGGCGACTGAGGGGGCGTCCTCACGAAGCGACATGCGGA
. : . : . : . : . : . :
JMFF015M05+ CGCGGGAGG
JMSF046H10+ CGCGGGAGG
JMSF012C08+ CGCGGGAGG
JMFF019N02+ CCCGGGAGGGCGGAGTTCGGGAGGTGGTGGAGGGGTGATGGATGGTGGCGCCGGCGCCGG
____________________________________________________________
consensus CGCGGGAGGGCGGAGTTCGGGAGGTGGTGGAGGGGTGATGGATGGTGGCGCCGGCGCCGG
. : . : . : . : . : . :
JMFF019N02+ CGCCGGAGAGGAATTGGTTATGGCGGAGAGAGAGAGTTGAGAGTTTCATTGTTAGATGTT
____________________________________________________________
consensus CGCCGGAGAGGAATTGGTTATGGCGGAGAGAGAGAGTTGAGAGTTTCATTGTTAGATGTT
. : . : . : . : . : . :
JMFF019N02+ ACGGCGGACGCGGCGGAGACGGACGGATTGTAGGGTTTATGCCTTTGGAAGTGAAAAACC
____________________________________________________________
consensus ACGGCGGACGCGGCGGAGACGGACGGATTGTAGGGTTTATGCCTTTGGAAGTGAAAAACC