List of clones in pair P015990.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018B06Sequence526005699 (21)emb|CEG84964.1|1e-26Putative GTP-binding protein ypt2 [Rhizopus microsporus]786005699 (21)ref|XP_009598240.1|3e-115PREDICTED: ras-related protein RABE1c-like [Nicotiana tomentosiformis]
JMFF021F08Sequence591005699 (21)ref|XP_007016509.1|4e-75RAB GTPaseA isoform 2, partial [Theobroma cacao] ref|XP_007016510.1| RAB GTPaseA712005699 (21)ref|XP_009598240.1|2e-114PREDICTED: ras-related protein RABE1c-like [Nicotiana tomentosiformis]
JMFF051A02Sequence612005699 (21)ref|XP_007016509.1|1e-81RAB GTPaseA isoform 2, partial [Theobroma cacao] ref|XP_007016510.1| RAB GTPaseA460005699 (21)gb|ABP35527.1|3e-46ARF small GTPase [Ipomoea batatas]
JMSF021C21Sequence636005699 (21)ref|XP_007016509.1|3e-87RAB GTPaseA isoform 2, partial [Theobroma cacao] ref|XP_007016510.1| RAB GTPaseA734005699 (21)ref|XP_009598240.1|2e-109PREDICTED: ras-related protein RABE1c-like [Nicotiana tomentosiformis]
JMSF022I06Sequence657005699 (21)ref|XP_007016509.1|1e-92RAB GTPaseA isoform 2, partial [Theobroma cacao] ref|XP_007016510.1| RAB GTPaseA776005699 (21)ref|XP_009598240.1|2e-109PREDICTED: ras-related protein RABE1c-like [Nicotiana tomentosiformis]
JMSF026H09Sequence655005699 (21)ref|XP_010243200.1|2e-60PREDICTED: ras-related protein RABE1c-like [Nelumbo nucifera]739005699 (21)ref|XP_009598240.1|1e-88PREDICTED: ras-related protein RABE1c-like [Nicotiana tomentosiformis]
JMSF034M13Sequence616005699 (21)ref|XP_010243200.1|2e-50PREDICTED: ras-related protein RABE1c-like [Nelumbo nucifera]723005699 (21)ref|XP_009598240.1|6e-113PREDICTED: ras-related protein RABE1c-like [Nicotiana tomentosiformis]
JMSF037A14Sequence657005699 (21)ref|XP_007016509.1|5e-92RAB GTPaseA isoform 2, partial [Theobroma cacao] ref|XP_007016510.1| RAB GTPaseA726005699 (21)ref|XP_009598240.1|1e-109PREDICTED: ras-related protein RABE1c-like [Nicotiana tomentosiformis]
JMSF038A14Sequence172005699 (21)ref|XP_004494002.1|1e-11PREDICTED: ras-related protein RABE1c-like [Cicer arietinum]
JMSF038O19Sequence636005699 (21)ref|XP_007016509.1|3e-87RAB GTPaseA isoform 2, partial [Theobroma cacao] ref|XP_007016510.1| RAB GTPaseA259005699 (21)gb|ABP35527.1|6e-40ARF small GTPase [Ipomoea batatas]
JMSF040C21Sequence636005699 (21)ref|XP_010553297.1|6e-85PREDICTED: ras-related protein RABE1a-like [Tarenaya hassleriana] ref|XP_0105532856005699 (21)ref|XP_009598240.1|5e-119PREDICTED: ras-related protein RABE1c-like [Nicotiana tomentosiformis]

Contig 5699 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig005699============================================1232         
   3 ---------------------------------------------------->JMSF026H09                                                  
                                             <-----------------------------------------------------------rJMSF026H09  
 124 ------------------------------------------>JMFF018B06                                                            
                               <---------------------------------------------------------------rJMFF018B06  
 141 ------------------------------------------------->JMSF034M13                                                     
                                    <---------------------------------------------------------rJMSF034M13  
 211           ---------------------------------------------------->JMSF022I06                                        
                                   <--------------------------------------------------------------rJMSF022I06  
 247           ----------------------------------------------->JMFF021F08                                             
                                     <---------------------------------------------------------rJMFF021F08  
 260          --------------------------------------------------->JMSF040C21                                          
                        <---------------------------------------------------------------------rJMSF040C21  
 267          --------------------------------------------------->JMSF021C21                                          
                                 <-----------------------------------------------------------rJMSF021C21  
 268           ---------------------------------------------------->JMSF037A14                                        
                                  <----------------------------------------------------------rJMSF037A14  
 289               --------------------------------------------->JMFF051A02                                           
                                                           <------------------------------------rJMFF051A02  
 462          --------------------------------------------------->JMSF038O19                                          
                                                        <--------------------rJMSF038O19

The following clones don't have the opposite end in this pair.

                                              <-----------rJMSF038A14-