| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF018B06 | Sequence | 526 | 005699 (21) | emb|CEG84964.1| | 1e-26 | Putative GTP-binding protein ypt2 [Rhizopus microsporus] | 786 | 005699 (21) | ref|XP_009598240.1| | 3e-115 | PREDICTED: ras-related protein RABE1c-like [Nicotiana tomentosiformis] |
| JMFF021F08 | Sequence | 591 | 005699 (21) | ref|XP_007016509.1| | 4e-75 | RAB GTPaseA isoform 2, partial [Theobroma cacao] ref|XP_007016510.1| RAB GTPaseA | 712 | 005699 (21) | ref|XP_009598240.1| | 2e-114 | PREDICTED: ras-related protein RABE1c-like [Nicotiana tomentosiformis] |
| JMFF051A02 | Sequence | 612 | 005699 (21) | ref|XP_007016509.1| | 1e-81 | RAB GTPaseA isoform 2, partial [Theobroma cacao] ref|XP_007016510.1| RAB GTPaseA | 460 | 005699 (21) | gb|ABP35527.1| | 3e-46 | ARF small GTPase [Ipomoea batatas] |
| JMSF021C21 | Sequence | 636 | 005699 (21) | ref|XP_007016509.1| | 3e-87 | RAB GTPaseA isoform 2, partial [Theobroma cacao] ref|XP_007016510.1| RAB GTPaseA | 734 | 005699 (21) | ref|XP_009598240.1| | 2e-109 | PREDICTED: ras-related protein RABE1c-like [Nicotiana tomentosiformis] |
| JMSF022I06 | Sequence | 657 | 005699 (21) | ref|XP_007016509.1| | 1e-92 | RAB GTPaseA isoform 2, partial [Theobroma cacao] ref|XP_007016510.1| RAB GTPaseA | 776 | 005699 (21) | ref|XP_009598240.1| | 2e-109 | PREDICTED: ras-related protein RABE1c-like [Nicotiana tomentosiformis] |
| JMSF026H09 | Sequence | 655 | 005699 (21) | ref|XP_010243200.1| | 2e-60 | PREDICTED: ras-related protein RABE1c-like [Nelumbo nucifera] | 739 | 005699 (21) | ref|XP_009598240.1| | 1e-88 | PREDICTED: ras-related protein RABE1c-like [Nicotiana tomentosiformis] |
| JMSF034M13 | Sequence | 616 | 005699 (21) | ref|XP_010243200.1| | 2e-50 | PREDICTED: ras-related protein RABE1c-like [Nelumbo nucifera] | 723 | 005699 (21) | ref|XP_009598240.1| | 6e-113 | PREDICTED: ras-related protein RABE1c-like [Nicotiana tomentosiformis] |
| JMSF037A14 | Sequence | 657 | 005699 (21) | ref|XP_007016509.1| | 5e-92 | RAB GTPaseA isoform 2, partial [Theobroma cacao] ref|XP_007016510.1| RAB GTPaseA | 726 | 005699 (21) | ref|XP_009598240.1| | 1e-109 | PREDICTED: ras-related protein RABE1c-like [Nicotiana tomentosiformis] |
| JMSF038A14 | Sequence | 172 | 005699 (21) | ref|XP_004494002.1| | 1e-11 | PREDICTED: ras-related protein RABE1c-like [Cicer arietinum] | |||||
| JMSF038O19 | Sequence | 636 | 005699 (21) | ref|XP_007016509.1| | 3e-87 | RAB GTPaseA isoform 2, partial [Theobroma cacao] ref|XP_007016510.1| RAB GTPaseA | 259 | 005699 (21) | gb|ABP35527.1| | 6e-40 | ARF small GTPase [Ipomoea batatas] |
| JMSF040C21 | Sequence | 636 | 005699 (21) | ref|XP_010553297.1| | 6e-85 | PREDICTED: ras-related protein RABE1a-like [Tarenaya hassleriana] ref|XP_0105532 | 856 | 005699 (21) | ref|XP_009598240.1| | 5e-119 | PREDICTED: ras-related protein RABE1c-like [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMFF018B06- GAGCGCGTGAGAACCGCAAATATCCCAAC
JMSF034M13- GGCGAGCGCGTGAGAACCGCAAATATCCCAAC
JMSF026H09- GAGCGCGTGAGAACCGCAAATATCCCAAC
____________________________________________________________
consensus GGCGAGCGCGTGAGAACCGCAAATATCCCAAC
. : . : . : . : . : . :
JMFF018B06- CCCTCTCTCTCTCTCTTGCTGCTAACGTGCGCGAGGGCAGAACTCGGCGTACGCTAAAGT
JMSF034M13- CCCTCTCTCTCTCTCTTGCTGCTAACGTGCGCGAGGGCAGAACTCGGCGTACGCTAAAGT
JMSF026H09- CCCTCTCTCTCTCTCTTGCTGCTAACGTGCGCGAGGGCAGAACTCGGCGTACGCTAAAGT
____________________________________________________________
consensus CCCTCTCTCTCTCTCTTGCTGCTAACGTGCGCGAGGGCAGAACTCGGCGTACGCTAAAGT
. : . : . : . : . : . :
JMFF018B06- AAAAAACCAAGGAGGAGAAGAGGGACTTGTGCGCACCATAGCCATCGCCATACGGGGGAA
JMSF034M13- AAAAAACCAAGGAGGAGAAGAGGGACTTGTGCGCACCATAGCCATCGCCATACGGGGGAA
JMSF026H09- AAAAAACCAAGGAGGAGAAGAGGGACTTGTGCGCACCATAGCCATCGCCATACGGGGGAA
JMSF040C21- GTGCGCACCATAGCCATCGCCATACGGGGGAA
JMSF038O19- GCGCACCATAGCCATCGCCATACGGGGGAA
JMFF021F08- CACCATAGCCATCGCCATACGGGGGAA
JMSF021C21- GCGCACCATAGCCATCGCCATACGGGGGAA
JMSF037A14- GTGCGCACCATAGCCATCGCCATACGGGGGAA
JMSF022I06- GCGCACCATAGCCATCGCCATACGGGGGAA
____________________________________________________________
consensus AAAAAACCAAGGAGGAGAAGAGGGACTTGTGCGCACCATAGCCATCGCCATACGGGGGAA
. : . : . : . : . : . :
JMFF018B06- CAGATCACGCTGTGTCTCCTATTCCGAGGCTGAGTGAAAGTAGGCGTTTGGTTATCGATA
JMSF034M13- CAGATCACGCTGTGTCTCCTATTCCGAGGCTGAGTGAAAGTAGGCGTTTGGTTATCGATA
JMSF026H09- CAGATCACGCTGTGTCTCCTATTCCGAGGCTGAGTGAAAGTAGGCGTTTGGTTATCGATA
JMSF040C21- CAGATCACGCTGTGTCTCCTATTCCGAGGCTGAGTGAAAGTAGGCGTTTGGTTATCGATA
JMSF038O19- CAGATCACGCTGTGTCTCCTATTCCGAGGCTGAGTGAAAGTAGGCGTTTGGTTATCGATA
JMFF021F08- CAGATCACGCTGTGTCTCCTATTCCGAGGCTGAGTGAAAGTAGGCGTTTGGTTATCGATA
JMFF051A02- GAGGCTGAGTGAAAGTAGGCGTTTGGTTATCGATA
JMSF021C21- CAGATCACGCTGTGTCTCCTATTCCGAGGCTGAGTGAAAGTAGGCGTTTGGTTATCGATA
JMSF037A14- CAGATCACGCTGTGTCTCCTATTCCGAGGCTGAGTGAAAGTAGGCGTTTGGTTATCGATA
JMSF022I06- CAGATCACGCTGTGTCTCCTATTCCGAGGCTGAGTGAAAGTAGGCGTTTGGTTATCGATA
____________________________________________________________
consensus CAGATCACGCTGTGTCTCCTATTCCGAGGCTGAGTGAAAGTAGGCGTTTGGTTATCGATA
. : . : . : . : . : . :
JMFF018B06- CAAAGGATTTGGGGCTTTTTTGAGATTGTGAAGCGATCGTTTTCTCGATGGCCGCACCTC
JMSF034M13- CAAAGGATTTGGGGCTTTTTTGAGATTGTGAAGCGATCGTTTTCTCGATGGCCGCACCTC
JMSF026H09- CAAAGGATTTGGGGCTTTTTTGAGATTGTGAAGCGATCGTTTTCTCGATGGCCGCACCTC
JMSF040C21- CAAAGGATTTGGGGCTTTTTTGAGATTGTGAAGCGATCGTTTTCTCGATGGCCGCACCTC
JMSF038O19- CAAAGGATTTGGGGCTTTTTTGAGATTGTGAAGCGATCGTTTTCTCGATGGCCGCACCTC
JMFF021F08- CAAAGGATTTGGGGCTTTTTTGAGATTGTGAAGCGATCGTTTTCTCGATGGCCGCACCTC
JMFF051A02- CAAAGGATTTGGGGCTTTTTTGAGATTGTGAAGCGATCGTTTTCTCGATGGCCGCACCTC
JMSF021C21- CAAAGGATTTGGGGCTTTTTTGAGATTGTGAAGCGATCGTTTTCTCGATGGCCGCACCTC
JMSF037A14- CAAAGGATTTGGGGCTTTTTTGAGATTGTGAAGCGATCGTTTTCTCGATGGCCGCACCTC
JMSF022I06- CAAAGGATTTGGGGCTTTTTTGAGATTGTGAAGCGATCGTTTTCTCGATGGCCGCACCTC
rJMSF040C21+ TGAGATTGTGAAGCGATCGTTTTCTCGATGGCCGCACCTC
____________________________________________________________
consensus CAAAGGATTTGGGGCTTTTTTGAGATTGTGAAGCGATCGTTTTCTCGATGGCCGCACCTC
. : . : . : . : . : . :
JMFF018B06- CGGCGAGAGCTCGAGCCGACTACGATTACCTCATAAAGCTCCTCCTCATCGGCGACAGCG
JMSF034M13- CGGCGAGAGCTCGAGCCGACTACGATTACCTCATAAAGCTCCTCCTCATCGGCGACAGCG
JMSF026H09- CGGCGAGAGCTCGAGCCGACTACGATTACCTCATAAAGCTCCTCCTCATCGGCGACAGCG
JMSF040C21- CGGCGAGAGCTCGAGCCGACTACGATTACCTCATAAAGCTCCTCCTCATCGGCGACAGCG
JMSF038O19- CGGCGAGAGCTCGAGCCGACTACGATTACCTCATAAAGCTCCTCCTCATCGGCGACAGCG
JMFF021F08- CGGCGAGAGCTCGAGCCGACTACGATTACCTCATAAAGCTCCTCCTCATCGGCGACAGCG
JMFF051A02- CGGCGAGAGCTCGAGCCGACTACGATTACCTCATAAAGCTCCTCCTCATCGGCGACAGCG
JMSF021C21- CGGCGAGAGCTCGAGCCGACTACGATTACCTCATAAAGCTCCTCCTCATCGGCGACAGCG
JMSF037A14- CGGCGAGAGCTCGAGCCGACTACGATTACCTCATAAAGCTCCTCCTCATCGGCGACAGCG
JMSF022I06- CGGCGAGAGCTCGAGCCGACTACGATTACCTCATAAAGCTCCTCCTCATCGGCGACAGCG
rJMSF040C21+ CGGCGAGAGCTCGAGCCGACTACGATTACCTCATAAAGCTCCTCCTCATCGGCGACAGCG
rJMFF018B06+ CGACAGCG
____________________________________________________________
consensus CGGCGAGAGCTCGAGCCGACTACGATTACCTCATAAAGCTCCTCCTCATCGGCGACAGCG
. : . : . : . : . : . :
JMFF018B06- GTGTTGGCAAGAGTTGTCTACTCTTGCGTTTTTCAGATGGTTCCTTCACTACAAGTTTTA
JMSF034M13- GTGTTGGCAAGAGTTGTCTACTCTTGCGTTTTTCAGATGGTTCCTTCACTACAAGTTTTA
JMSF026H09- GTGTTGGCAAGAGTTGTCTACTCTTGCGTTTTTCAGATGGTTCCTTCACTACAAGTTTTA
JMSF040C21- GTGTTGGCAAGAGTTGTCTACTCTTGCGTTTTTCAGATGGTTCCTTCACTACAAGTTTTA
JMSF038O19- GTGTTGGCAAGAGTTGTCTACTCTTGCGTTTTTCAGATGGTTCCTTCACTACAAGTTTTA
JMFF021F08- GTGTTGGCAAGAGTTGTCTACTCTTGCGTTTTTCAGATGGTTCCTTCACTACAAGTTTTA
JMFF051A02- GTGTTGGCAAGAGTTGTCTACTCTTGCGTTTTTCAGATGGTTCCTTCACTACAAGTTTTA
JMSF021C21- GTGTTGGCAAGAGTTGTCTACTCTTGCGTTTTTCAGATGGTTCCTTCACTACAAGTTTTA
JMSF037A14- GTGTTGGCAAGAGTTGTCTACTCTTGCGTTTTTCAGATGGTTCCTTCACTACAAGTTTTA
JMSF022I06- GTGTTGGCAAGAGTTGTCTACTCTTGCGTTTTTCAGATGGTTCCTTCACTACAAGTTTTA
rJMSF040C21+ GTGTTGGCAAGAGTTGTCTACTCTTGCGTTTTTCAGATGGTTCCTTCACTACAAGTTTTA
rJMSF021C21+ CTCTTGCGTTTTTCAGATGGTTCCTTCACTACAAGTTTTA
rJMSF037A14+ TTTTCAGATGGTTCCTTCACTACAAGTTTTA
rJMSF034M13+ TCCTTCACTACAAGTTTTA
rJMFF018B06+ GTGTTGGCAAGAGTTGTNTACTCTTGCGTTTTTCAGATGGTTCCTTCACTACAAGTTTTA
rJMSF022I06+ AGATGGTTCCTTCACTACAAGTTTTA
____________________________________________________________
consensus GTGTTGGCAAGAGTTGTCTACTCTTGCGTTTTTCAGATGGTTCCTTCACTACAAGTTTTA
. : . : . : . : . : . :
JMFF018B06- TCACCACCATAGGGATTGATTTTAAGATACGAACCATTGAACTGGATGGCAAGCGCATCA
JMSF034M13- TCACCACCATAGGGATTGATTTTAAGATACGAACCATTGAACTGGATGGCAAGCGCATCA
JMSF026H09- TCACCACCATAGGGATTGATTTTAAGATACGAACCATTGAACTGGATGGCAAGCGCATCA
JMSF040C21- TCACCACCATAGGGATTGATTTTAAGATACGAACCATTGAACTGGATGGCAAGCG---CA
JMSF038O19- TCACCACCATAGGGATTGATTTTAAGATACGAACCATTGAACTGGATGGCAAGCGCATCA
JMFF021F08- TCACCACCATAGGGATTGATTTTAAGATACGAACCATTGAACTGGATGGCAAGCGCATCA
JMFF051A02- TCACCACCATAGGGATTGATTTTAAGATACGAACCATTGAACTGGATGGCAAGCGCATCA
JMSF021C21- TCACCACCATAGGGATTGATTTTAAGATACGAACCATTGAACTGGATGGCAAGCGCATCA
JMSF037A14- TCACCACCATAGGGATTGATTTTAAGATACGAACCATTGAACTGGATGGCAAGCGCATCA
JMSF022I06- TCACCACCATAGGGATTGATTTTAAGATACGAACCATTGAACTGGATGGCAAGCGCATCA
rJMSF040C21+ TCACCACCATAGGGATTGATTTTAAGATACGAACCATTGAACTGGATGGCAAGCG---CA
rJMSF021C21+ TCACCACCATAGGGATTGATTTTAAGATACGAACCATTGAACTGGATGGCAAGCGCATCA
rJMSF037A14+ TCACCACCATAGGGATTGATTTTAAGATACGAACCATTGAACTGGATGGCAAGCGCATCA
rJMSF034M13+ TCACCACCATAGGGATTGATTTTAAGATACGAACCATTGAACTGGATGGCAAGCGCATCA
rJMFF021F08+ ACCATAGGGATTGATTTTAAGATACGAACCATTGAACTGGATGGCAAGCGCATCA
rJMFF018B06+ TCACCACCATAGGGATTGATTTTAAGATACGAACCATTGAACTGGATGGCAAGCGCATCA
rJMSF022I06+ TCACCACCATAGGGATTGATTTTAAGATACGAACCATTGAACTGGATGGCAAGCGCATCA
____________________________________________________________
consensus TCACCACCATAGGGATTGATTTTAAGATACGAACCATTGAACTGGATGGCAAGCGCATCA
. : . : . : . : . : . :
JMFF018B06- AACTCCAAATTTGGGATACTGCTGGTCAGGAACGGTTCCGAACAATCACTACTGCGTACT
JMSF034M13- AACTCCAAATTTGGGATACTGCTGGTCAGGAACGGTTCCGAACAATCACTACTGCGTACT
JMSF026H09- AACTCCAAATTTGGGATACTGCTGGTCAGGAACGGTTCCGAACAATCACTACTGCGTACT
JMSF040C21- AACTCCAAATTTGGGATACTGCTGGTCAGGAACGGTTCCGAACAATCACTACTGCGTACT
JMSF038O19- AACTCCAAATTTGGGATACTGCTGGTCAGGAACGGTTCCGAACAATCACTACTGCGTACT
rJMSF038A14+ TACTGCGTACT
JMFF021F08- AACTCCAAATTTGGGATACTGCTGGTCAGGAACGGTTCCGAACAATCACTACTGCGTACT
JMFF051A02- AACTCCAAATTTGGGATACTGCTGGTCAGGAACGGTTCCGAACAATCACTACTGCGTACT
JMSF021C21- AACTCCAAATTTGGGATACTGCTGGTCAGGAACGGTTCCGAACAATCACTACTGCGTACT
JMSF037A14- AACTCCAAATTTGGGATACTGCTGGTCAGGAACGGTTCCGAACAATCACTACTGCGTACT
JMSF022I06- AACTCCAAATTTGGGATACTGCTGGTCAGGAACGGTTCCGAACAATCACTACTGCGTACT
rJMSF040C21+ AACTCCAAATTTGGGATACTGCTGGTCAGGAACGGTTCCGAACAATCACTACTGCGTACT
rJMSF021C21+ AACTCCAAATTTGGGATACTGCTGGTCAGGAACGGTTCCGAACAATCACTACTGCGTACT
rJMSF037A14+ AACTCCAAATTTGGGATACTGCTGGTCAGGAACGGTTCCGAACAATCACTACTGCGTACT
rJMSF034M13+ AACTCCAAATTTGGGATACTGCTGGTCAGGAACGGTTCCGAACAATCACTACTGCGTACT
rJMFF021F08+ AACTCCAAATTTGGGATACTGCTGGTCAGGAACGGTTCCGAACAATCACTACTGCGTACT
rJMFF018B06+ AACTCCAAATTTGGGATACTGCTGGTCAGGAACGGTTCCGAACAATCACTACTGCGTACT
rJMSF022I06+ AACTCCAAATTTGGGATACTGCTGGTCAGGAACGGTTCCGAACAATCACTACTGCGTACT
rJMSF026H09+ AACAATCACTACTGCGTACT
____________________________________________________________
consensus AACTCCAAATTTGGGATACTGCTGGTCAGGAACGGTTCCGAACAATCACTACTGCGTACT
. : . : . : . : . : . :
JMFF018B06- ATCGAGGAGCCATGG
JMSF034M13- ATCGAGGAGCCATGGGTATATTGTTGGTTTATGACGTTACAGATGAGTCATCTTTTAACA
JMSF026H09- ATCGAGGAGCCATGGGTATATTGTTGGTTTATGACGTTACAGATGAGTCATCTTTTAACA
JMSF040C21- ATCGAGGAGCCATGGGTATATTGTTGGTTTATGACGTTACAGATGAGTCATCTTTTAACA
JMSF038O19- ATCGAGGAGCCATGGGTATATTGTTGGTTTATGACGTTACAGATGAGTCATCTTTTAACA
rJMSF038A14+ ATCGAGGAGCCATGGGTATAGNGTTGGTTNATGACGTTACAGATGAGTCATCTTTTAACA
JMFF021F08- ATCGAGGAGCCATGGGTATATTGTTGGTTTATGACGTTACAGATGAGTCATCTTTTAACA
JMFF051A02- ATCGAGGAGCCATGGGTATATTGTTGGTTTATGACGTTACAGATGAGTCATCTTTTAACA
JMSF021C21- ATCGAGGAGCCATGGGTATATTGTTGGTTTATGACGTTACAGATGAGTCATCTTTTAACA
JMSF037A14- ATCGAGGAGCCATGGGTATATTGTTGGTTTATGACGTTACAGATGAGTCATCTTTTAACA
JMSF022I06- ATCGAGGAGCCATGGGTATATTGTTGGTTTATGACGTTACAGATGAGTCATCTTTTAACA
rJMSF040C21+ ATCGAGGAGCCATGGGTATATTGTTGGTTTATGACGTTACAGATGAGTCATCTTTTAACA
rJMSF021C21+ ATCGAGGAGCCATGGGTATATTGTTGGTTTATGACGTTACAGATGAGTCATCTTTTAACA
rJMSF037A14+ ATCGAGGAGCCATGGGTATATTGTTGGTTTATGACGTTACAGATGAGTCATCTTTTAACA
rJMSF034M13+ ATCGAGGAGCCATGGGTATATTGTTGGTTTATGACGTTACAGATGAGTCATCTTTTAACA
rJMFF021F08+ ATCGAGGAGCCATGGGTATATTGTTGGTTTATGACGTTACAGATGAGTCATCTTTTAACA
rJMFF018B06+ ATCGAGGAGCCATGGGTATATTGTTGGTTTATGACGTTACAGATGAGTCATCTTTTAACA
rJMSF022I06+ ATCGAGGAGCCATGGGTATATTGTTGGTTTATGACGTTACAGATGAGTCATCTTTTAACA
rJMSF026H09+ ATCGAGGAGCCATGGGTATATTGTTGGTTTATGACGTTACAGATGAGTCATCTTTTAACA
____________________________________________________________
consensus ATCGAGGAGCCATGGGTATATTGTTGGTTTATGACGTTACAGATGAGTCATCTTTTAACA
. : . : . : . : . : . :
JMSF034M13- ATATTAGGAAC-TGGATTCGAAATATTGAGCAACATGCCTCCGAC
JMSF026H09- ATATTAGGAAC-TGGATTCGAAATATTGAGCAACATGCCTCCGACAATGTAAACAAAATA
JMSF040C21- ATATTAGGAAC-TGGATTCGAAATATTGAGCAACATGCCTCCGACAATGTAAACAAAATA
JMSF038O19- ATATTAGGAAC-TGGATTCGAAATATTGAGCAACATGCCTCCGACAATGTAAACAAAATA
rJMSF038A14+ ATATTAGGAACGCGGATTCGAAATATTGAGCAACATGCCTCCGACAAAGNAAACAAAATA
JMFF021F08- ATATTAGGAAC-TGGATTCGAAATATTGAGCAACATGCCTCCGACAATGTAAACAAAATA
JMFF051A02- ATATTAGGAAC-TGGATTCGAAATATTGAGCAACATGCCTCCGACAATGTAAACAAAATA
JMSF021C21- ATATTAGGAAC-TGGATTCGAAATATTGAGCAACATGCCTCCGACAATGTAAACAAAATA
JMSF037A14- ATATTAGGAAC-TGGATTCGAAATATTGAGCAACATGCCTCCGACAATGTAAACAAAATA
JMSF022I06- ATATTAGGAAC-TGGATTCGAAATATTGAGCAACATGCCTCCGACAATGTAAACAAAATA
rJMSF040C21+ ATATTAGGAAC-TGGATTCGAAATATTGAGCAACATGCCTCCGACAATGTAAACAAAATA
rJMSF021C21+ ATATTAGGAAC-TGGATTCGAAATATTGAGCAACATGCCTCCGACAATGTAAACAAAATA
rJMSF037A14+ ATATTAGGAAC-TGGATTCGAAATATTGAGCAACATGCCTCCGACAATGTAAACAAAATA
rJMSF034M13+ ATATTAGGAAC-TGGATTCGAAATATTGAGCAACATGCCTCCGACAATGTAAACAAAATA
rJMFF021F08+ ATATTAGGAAC-TGGATTCGAAATATTGAGCAACATGCCTCCGACAATGTAAACAAAATA
rJMFF018B06+ ATATTAGGAAC-TGGATTCGAAATATTGAGCAACATGCCTCCGACAATGTAAACAAAATA
rJMSF022I06+ ATATTAGGAAC-TGGATTCGAAATATTGAGCAACATGCCTCCGACAATGTAAACAAAATA
rJMSF026H09+ ATATTAGGAAC-TGGATTCGAAATATTGAGCAACATGCCTCCGACAATGTAAACAAAATA
____________________________________________________________
consensus ATATTAGGAAC-TGGATTCGAAATATTGAGCAACATGCCTCCGACAATGTAAACAAAATA
. : . : . : . : . : . :
JMSF026H09- CTTGTAGGAAACAAAGCTGACATGGA
JMSF040C21- CTTGTAGGAAACAAAGCTGACATGGACGAAAGCAAAAGAGCTGTGCCAACATCTAAGGGA
JMSF038O19- CTTGTAGGAAACAAAGCTGACATGGACGAAAGCAAAAGAGCTGTGCCAACATCTAAGGGA
rJMSF038A14+ CTTGTAGGNAACAAAG
JMFF021F08- CTTGTAGGAAACAAAGCTGACATGGACGAAAGCAAAAGAGCTGTGCCAACATCTAAGGGA
JMFF051A02- CTTGTAGGAAACAAAGCTGACATGGACGAAAGCAAAAGAGCTGTGCCCACATCTAAGGGA
JMSF021C21- CTTGTAGGAAACAAAGCTGACATGGACGAAAGCAAAAGAGCTGTGCCAACATCTAAGGGA
JMSF037A14- CTTGTAGGAAACAAAGCTGACATGGACGAAAGCAAAAGAGCTGTGCCAACATCTAAGGGA
JMSF022I06- CTTGTAGGAAACAAAGCTGACATGGACGAAAGCAAAAGAGCTGTGCCAACATCTAAGGGA
rJMSF040C21+ CTTGTAGGAAACAAAGCTGACATGGACGAAAGCAAAAGAGCTGTGCCAACATCTAAGGGA
rJMSF021C21+ CTTGTAGGAAACAAAGCTGACATGGACGAAAGCAAAAGAGCTGTGCCAACATCTAAGGGA
rJMSF037A14+ CTTGTAGGAAACAAAGCTGACATGGACGAAAGCAAAAGAGCTGTGCCAACATCTAAGGGA
rJMSF034M13+ CTTGTAGGAAACAAAGCTGACATGGACGAAAGCAAAAGAGCTGTGCCAACATCTAAGGGA
rJMFF021F08+ CTTGTAGGAAACAAAGCTGACATGGACGAAAGCAAAAGAGCTGTGCCAACATCTAAGGGA
rJMSF038O19+ TTGTAGGAANCAAAGCTGACATGGACGAAAGCAAANGAGCTGTTCCAACATCTAAGGGA
rJMFF018B06+ CTTGTAGGAAACAAAGCTGACATGGACGAAAGCAAAAGAGCTGTGCCAACATCTAAGGGA
rJMSF022I06+ CTTGTAGGAAACAAAGCTGACATGGACGAAAGCAAAAGAGCTGTGCCAACATCTAAGGGA
rJMFF051A02+ AAAGCAAAAGAGCTGTGCCAACATCTAAGGGA
rJMSF026H09+ CTTGTAGGAAACAAAGCTGACATGGACGAAAGCAAAAGAGCTGTGCCAACATCTAAGGGA
____________________________________________________________
consensus CTTGTAGGAAACAAAGCTGACATGGACGAAAGCAAAAGAGCTGTGCCAACATCTAAGGGA
. : . : . : . : . : . :
JMSF040C21- CAAGCACTCGCTGATGAGTATGGGATTAAGTTTTTTGAAACTAGTGCTAAAACAAATCTT
JMSF038O19- CAAGCACTCGCTGATGAGTATGGGATTAAGTTTTTTGAAACTAGTGCTAAAACAAATCTT
JMFF021F08- CAAGCACTCGCTGATGAGTA
JMFF051A02- CNAGCACTCGCTGATGAGTATGGGATTNAGTTTTTTGAAACTAGTGCTAAAAC
JMSF021C21- CAAGCACTCGCTGATGAGTATGGGATTAAGTTTTTTGAAACTAGTGCTAAAACAAATCTT
JMSF037A14- CAAGCACTCGCTGATGAGTATGGGATTAAGTTTTTTGAAACTAGTGCTAAAACAAATCTT
JMSF022I06- CAAGCACTCGCTGATGAGTATGGGATTAAGTTTTTTGAAACTAGTGCTAAAACAAATCTT
rJMSF040C21+ CAAGCACTCGCTGATGAGTATGGGATTAAGTTTTTTGAAACTAGTGCTAAAACAAATCTT
rJMSF021C21+ CAAGCACTCGCTGATGAGTATGGGATTAAGTTTTTTGAAACTAGTGCTAAAACAAATCTT
rJMSF037A14+ CAAGCACTCGCTGATGAGTATGGGATTAAGTTTTTTGAAACTAGTGCTAAAACAAATCTT
rJMSF034M13+ CAAGCACTCGCTGATGAGTATGGGATTAAGTTTTTTGAAACTAGTGCTAAAACAAATCTT
rJMFF021F08+ CAAGCACTCGCTGATGAGTATGGGATTAAGTTTTTTGAAACTAGTGCTAAAACAAATCTT
rJMSF038O19+ CAAGCACTCGCTGATGAGTATGGGATTAAGTTTTTTGAAACTAGTGNTAAAACAAATCTT
rJMFF018B06+ CAAGCACTCGCTGATGAGTATGGGATTAAGTTTTTTGAAACTAGTGCTAAAACAAATCTT
rJMSF022I06+ CAAGCACTCGCTGATGAGTATGGGATTAAGTTTTTTGAAACTAGTGCTAAAACAAATCTT
rJMFF051A02+ CAAGCACTCGCTGATGAGTATGGGATTAAGTTTTTTGAAACTAGTGCTAAAACAAATCTT
rJMSF026H09+ CAAGCACTCGCTGATGAGTATGGGATTAAGTTTTTTGAAACTAGTGCTAAAACAAATCTT
____________________________________________________________
consensus CAAGCACTCGCTGATGAGTATGGGATTAAGTTTTTTGAAACTAGTGCTAAAACAAATCTT
. : . : . : . : . : . :
JMSF040C21- AATGTG
JMSF038O19- AATGTG
JMSF021C21- AATGTG
JMSF037A14- AATGTGGAACAAGTTTTCTTTTCAA
JMSF022I06- AATGTGGAACAAGTTTTCTTTTCAATA
rJMSF040C21+ AATGTGGAACAAGTTTTCTTTTCAATAGCAAAGGATATAAAGCAAAGGCTTTCAGACACA
rJMSF021C21+ AATGTGGAACAAGTTTTCTTTTCAATAGCAAAGGATATAAAGCAAAGGCTTTCAGACACA
rJMSF037A14+ AATGTGGAACAAGTTTTCTTTTCAATAGCAAAGGATATAAAGCAAAGGCTTTCAGACACA
rJMSF034M13+ AATGTGGAACAAGTTTTCTTTTCAATAGCAAAGGATATAAAGCAAAGGCTTTCAGACACA
rJMFF021F08+ AATGTGGAACAAGTTTTCTTTTCAATAGCAAAGGATATAAAGCAAAGGCTTTCAGACACA
rJMSF038O19+ AATGTGGAACAAGTTTTCTTTTCAATAGCAAAGGATATAAAGCAAAGGCTTTCAGACACA
rJMFF018B06+ AATGTGGAACAAGTTTTCTTTTCAATAGCAAAGGATATAAAGCAAAGGCTTTCAGACACA
rJMSF022I06+ AATGTGGAACAAGTTTTCTTTTCAATAGCAAAGGATATAAAGCAAAGGCTTTCAGACACA
rJMFF051A02+ AATGTGGAACAAGTTTTCTTTTCAATAGCAAAGGATATAAAGCAAAGGCTTTCAGACACA
rJMSF026H09+ AATGTGGAACAAGTTTTCTTTTCAATAGCAAAGGATATAAAGCAAAGGCTTTCAGACACA
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consensus AATGTGGAACAAGTTTTCTTTTCAATAGCAAAGGATATAAAGCAAAGGCTTTCAGACACA
. : . : . : . : . : . :
rJMSF040C21+ GACTCAAAGGCAGAGCCTTCCACAATCAAGATCAACCAACCTGAGGCGGGAGCTGCATCT
rJMSF021C21+ GACTCAAAGGCAGAGCCTTCCACAATCAAGATCAACCAACCTGAGGCGGGAGCTGCATCT
rJMSF037A14+ GACTCAAAGGCAGAGCCTTCCACAATCAAGATCAACCAACCTGAGGCGGGAGCTGCATCT
rJMSF034M13+ GACTCAAAGGCAGAGCCTTCCACAATCAAGATCAACCAACCTGAGGCGGGAGCTGCATCT
rJMFF021F08+ GACTCAAAGGCAGAGCCTTCCACAATCAAGATCAACCAACCTGAGGCGGGAGCTGCATCT
rJMSF038O19+ GANTCAAAGGCAGAGCCTTCCACAATCAAGATCAACCAACCTGAGGCGGGAGCTGCATNT
rJMFF018B06+ GACTCAAAGGCAGAGCCTTCCACAATCAAGATCAACCAACCTGAGGCGGGAGCTGCATCT
rJMSF022I06+ GACTCAAAGGCAGAGCCTTCCACAATCAAGATCAACCAACCTGAGGCGGGAGCTGCATCT
rJMFF051A02+ GACTCAAAGGCAGAGCCTTCCCCAATCAAGATCAACCAACCTGAGGCGGGAGCTGCATTT
rJMSF026H09+ GACTCAAAGGCAGAGCCTTCCACAATCAAGATCAACCAACCTGAGGCGGGAGCTGCATCT
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consensus GACTCAAAGGCAGAGCCTTCCACAATCAAGATCAACCAACCTGAGGCGGGAGCTGCATCT
. : . : . : . : . : . :
rJMSF040C21+ GGTCAACTTGCCCAAAAATCTGCTTGTTGTGGTTCATAAGGGGTGGCTGTTTGAGTGGAG
rJMSF021C21+ GGTCAACTTGCCCAAAAATCTGCTTGTTGTGGTTCATAAGGGGTGGCTGTTTGAGTGGAG
rJMSF037A14+ GGTCAACTTGCCCAAAAATCTGCTTGTTGTGGTTCATAAGGGGTGGCTGTTTGAGTGGAG
rJMSF034M13+ GGTCAACTTGCCCAAAAATCTGCTTGTTGTGGTTCATAAGGGGTGGCTGTTTGAGTGGAG
rJMFF021F08+ GGTCAACTTGCCCAAAAATCTGCTTGTTGTGGTTCATAAGGGGTGGCTGTTTGAGTGGAG
rJMSF038O19+ GGTCAANTTGCCCAAAAATC
rJMFF018B06+ GGTCAACTTGCCCAAAAATCTGCTTGTTGTGGTTCATAAGGGGTGGCTGTTTGAGTGGAG
rJMSF022I06+ GGTCAACTTGCCCAAAAATCTGCTTGTTGTGGTTCATAAGGGGTGGCTGTTTGAGTGGAG
rJMFF051A02+ GGTCAACTTGCCCAAAAATCTGCTTGTTGTGGTTCATAAGGGGTGGCTGTTTGAGTGGAG
rJMSF026H09+ GGTCAACTTGCCCAAAAATCTGCTTGTTGTGGTTCATAAGGGGTGGCTGTTTGAGTGGAG
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consensus GGTCAACTTGCCCAAAAATCTGCTTGTTGTGGTTCATAAGGGGTGGCTGTTTGAGTGGAG
. : . : . : . : . : . :
rJMSF040C21+ ATTTAACCCTGTACCTATTCCTGTTCCCTACCATCAGGGTCATGAAAAGACTAGAGAAGG
rJMSF021C21+ ATTTAACCCTGTACCTATTCCTGTTCCCTACCATCAGGGTCATGAAAAGACTAGAGAAGG
rJMSF037A14+ ATTTAACCCTGTACCTATTCCTGTTCCCTACCATCAGGGTCATGAAAAGACTAGAGAAGG
rJMSF034M13+ ATTTAACCCTGTACCTATTCCTGTTCCCTACCATCAGGGTCATGAAAAGACTAGAGAAGG
rJMFF021F08+ ATTTAACCCTGTACCTATTCCTGTTCCCTACCATCAGGGTCATGAAAAGACTAGAGAAGG
rJMFF018B06+ ATTTAACCCTGTACCTATTCCTGTTCCCTACCATCAGGGTCATGAAAAGACTAGAGAAGG
rJMSF022I06+ ATTTAACCCTGTACCTATTCCTGTTCCCTACCATCAGGGTCATGAAAAGACTAGAGAAGG
rJMFF051A02+ ATTTAACCCTGTACCTATTCCTGTTCCCTACCATCAGGGTCATGAAAAGACTAGAGAAGG
rJMSF026H09+ ATTTAACCCTGTACCTATTCCTGTTCCCTACCATCAGGGTCATGAAAAGACTAGAGAAGG
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consensus ATTTAACCCTGTACCTATTCCTGTTCCCTACCATCAGGGTCATGAAAAGACTAGAGAAGG
. : . : . : . : . : . :
rJMSF040C21+ GCTAACTTTTATGACAAAATATATATTGGGTTGCTTGTATTTTTCTTATTTTAGTTTATT
rJMSF021C21+ GCTAACTTTTATGACAAAATATATATTGGGTTGCTTGTATTTTTCTTATTTTAGTTTATT
rJMSF037A14+ GCTAACTTTTATGACAAAATATATATTGGGTTGCTTGTATTTTTCTTATTTTAGTTTATT
rJMSF034M13+ GCTAACTTTTATGACAAAATATATATTGGGTTGCTTGTATTTTTCTTATTTTAGTTTATT
rJMFF021F08+ GCTAACTTTTATGACAAAATATATATTGGGTTGCTTGTATTTTTCTTATTTTAGTTTATT
rJMFF018B06+ GCTAACTTTTATGACAAAATATATATTGGGTTGCTTGTATTTTTCTTATTTTAGTTTATT
rJMSF022I06+ GCTAACTTTTATGACAAAATATATATTGGGTTGCTTGTATTTTTCTTATTTTAGTTTATT
rJMFF051A02+ GCTAACTTTTATGACAAAATATATATTGGGTTGCTTGTATTTTTCTTATTTTAGTTTATT
rJMSF026H09+ GCTAACTTTTATGACAAAATATATATTGGGTTGCTTGTATTTTTCTTATTTTAGTTTATT
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consensus GCTAACTTTTATGACAAAATATATATTGGGTTGCTTGTATTTTTCTTATTTTAGTTTATT
. : . : . : . : . : . :
rJMSF040C21+ TTATTGTTTTGAATCTTGTGTGTGAAAGATAGATTTATGT
rJMSF021C21+ TTATTGTTTTGAATCTTGTGTGTGAAAGATAGATT
rJMSF037A14+ TTATTGTTTTGAATCTTGTGTGTGAAAGATAG
rJMSF034M13+ TTATTGTTTTGAATCTTGTGTGTGAAAGATAGATTTATGT
rJMFF021F08+ TTATTGTTTTGAATCTTGTGTGTGAAAGATAGATTTATGTTGATTTGATGAGAATCGT
rJMFF018B06+ TTATTGTTTTGAATCTTGTGTGTGAAAGATAGATTTATGTTGATTTGATGAGAATCGTA
rJMSF022I06+ TTATTGTTTTGAATCTTGTGTGTGAAAGATAGATTTATGTTGATTTGATGAGAATCGTAT
rJMFF051A02+ TTATTGTTTTGAATCTTGTGTGTGAAAGATAGATTTATGTTGATTTGATGAGAATCGTAT
rJMSF026H09+ TTATTGTTTTGAATCTTGTGTGTGAAAGATAGATTTATGTTGATTTGATGAGAATCGTAT
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consensus TTATTGTTTTGAATCTTGTGTGTGAAAGATAGATTTATGTTGATTTGATGAGAATCGTAT
. : . : . : . : . : . :
rJMSF022I06+ TCCTTTTCAGTACTTCATTCTCCCTGTCCAC
rJMFF051A02+ TCCTTTTC
rJMSF026H09+ TCCTTTTCAGTACTTCATTCTCCCTGTCCACATTGCTTAATCACATTTCATAAGGTGCTG
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consensus TCCTTTTCAGTACTTCATTCTCCCTGTCCACATTGCTTAATCACATTTCATAAGGTGCTG
. : . : . : . : . : . :
rJMSF026H09+ CTTATAGTTTGTTCATACTGTATTTCTATGACTTGTCCAAAAAGATGATATGATGAGATA
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consensus CTTATAGTTTGTTCATACTGTATTTCTATGACTTGTCCAAAAAGATGATATGATGAGATA